Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr1g0681 ATGGCCGAGGCTTTACTTGGTGTTGTGTTTCACAACCTGATGTCTCTGGTTCAAAACGAATTTTCAACTCTATTTGGAATCAAGTCAAAGGCTCAAAAGCTATCAAGAACCTTAGAACTGATCAAGGCTGTTCTTCAAGACGCTGAAAAGAAGCAATTAACTGACCGATCTATTCAAATATGGTTGCAGCAACTCAAAGATGCGGTGTATGTGCTTGATGATATCCTTGATGAGTGTTTAATCAAATCCAGTCGACTCAAGGGTTTCAAACTAAAGAACGTCATGTTTCGACGTGATTTAGGCACTAGGTTGAAAGAGATTGCAAGCAGACTCAACCAAATTGCTGAAAATAAGAACAAGTTTCTTTTACGAGAAGGTATTGTTGTTACAGAAAAACCAATTGAAGTGGCTGACTGGCGCCAAACCAGCTCCATTATTGCCGAACCAAAGGTGTTTGGACGAGAAGATGATAAAGAGAGGATTGTTGAGTTTCTTCTCACCCAAGCGAGGGACTCGGACTTCCTTTCCGTCTATCCAATTGTTGGTTTAGGTGGTGTTGGAAAAACAACTCTTGCTCAATTGGTCTACAACGATGATAGGGTGAGTCACAATTTCAAAACAAAAATTTGGGTTTGTGTTTCAGAGGTATTCTCGGTCAAGGGGATTTTGTGTTCCATTATAGAATCCATGACAAAACAGAAGTGTGATGCAATGGGTTTAGATGTAATACAAAGAAAGGTGCAAGAAATGTTGCAAGGAAAAAGACGTTTGCTGGTTTTGGACGATGTTTGGATAAAAAGTCAAGAATTTGAATTTGGACTAGACCATGAGAAATGGAATAAATTGAAATCTGTGTTGTCTGGTGGATCGAAAGGTACTTCCGTTTTAGTGTCTACTCGTGATATGGAGGTTGCATCAATCATGGGAACATGCTCAACTCGTTCTTTGTCAGTTCTCTCTGATGATGAATGTTGGTTATTGTTCAAACAATATGCATTTGGACATGATAGAGAAGAGAGTGCAGAGCTTGTGGCAATAGGCAAGGAGATAGTAAAAAAATGTGCGGGATTGCCTCTTGCAGCACAAGCATTGGGGTGTCTAATGCACTCAAGGAGTGAAGAAAAGGAATGGTTTGAAATTAAAGAGAGCGAGCTTTGGGATTTACCGCATGAGAATTCTACTTTGCCAGCTCTGAGATTGAGCTACTTTCATTTATCACCAACCTTAAAACAATGTTTCGCTTTTTGTGCTATATTTCCTAAAGATACAAAAATCATGAAGGAAGAATTGATTCATCTTTGGATGGCTAATGAATTTATTTCATCTAGAAAAAATTTGGAGGTTGAAGATGTTGGCAACATGATTTGGAATGAATTGTGCCAAAAGTCTTTCTTTCAAGACATTCATATGGATGATGATTCAAGAGACATTTCTTTCAAAATGCATGATCTCATCCATGATCTTGCTCGATCAGTAGTGGTGCAAGAATGTATGGTTTTAGAGAATGAATGTTTGACAAATATGTCAAAAAGCACCCATCATATTAGTTTCATCTCTCCGCATCCAGTATCATTAGAAGAGGTTTCCTTCACAAAAGTGGAATCGTTGCGAACATTGTATCAACTAGCTTATTATTTTGAGAAGTATGACAATTTCTTACCAGTAAAGTACACCCTTCGCGTTTTGAAAACAAGCACTTTAGAGTTATCATTACTTGGTAGTTTAATTCATTTGAGGTATTTAGAGCTTCACAATTTTGACATAGAAACCTTCCCCGACTCAATTTATAGCTTACAAAAGTTGAAAATCTTGAAATTGAAAGATTTTTCCAACCTGAGTTGTCTTCCGGAACACTTGTCTTGCTTACAAAATCTTAGACATTTAGTCATTGAAGATTGTCATTTGTTGTCTCGCATGTTTCGTCATGTTGGAAAATTATCTTGCTTAAGAACATTAAGTGTTTATATTGTAAATTCCGAGAAAGGACATAGCTTAGCGGAGTTACGTGATCTAAACTTAGGAGGAAAGCTGGAGATCAGAGGCTTACCAAATGTCGGTAGTTTATCTGAAGCTCAAGAAGCCAACTTGATGGGTAAAAAAGACCTCGATGAATTATGCTTGTCATGGTTGCACAATGATTCATCTGTTAAGACCACTATTATTAGTGACGATCAAGTACTTGAAGTGCTTCAACCTCACACAAATCTCAAGAGCTTGAAAATAGATTTTTACAAAGGTTTATGCTTCCCAAGTTGGATCAGAACTCTTGGTAATTTAGTTACTCTTGAAATTAAGGGTTGCATGCACTGTGAACGGTTTTCATCACTTGGTAAACTACCATCTCTAAAAACACTTCAAATAACCTTGGTGTCTGTGAAATACTTGGATGATGATGAATTTCACAATGGTTTGGAAGTGAGAATTTTCCCATCTCTTGAGGTACTTATAATTGATGACTTACCAAACTTAGAGGGGTTGTTGAAAGTGGAAAAAAAGGAGATGTTTCCTTGTCTTTCTATTTTGAACATCAACAATTGCCCTAAACTTGAACTTCCGTGTCTTCCATCTGTTAAAGACCTGAGAGTACGGAAATGTACTAATGAGTTGCTGAAGTCAATCTCTAGCTTGTATTGTCTTACCACCCTTACACTTGATGGAGGCGAAGGAATAACATCCTTCCCAAAGGAGATGTTTGGAAACCTTACTTGTCTCCAATCTCTAACTCTACTGGGTTACCGAAATTTGAAGGAGTTACCAAATGAACCCTTCAACCTAGTTTTGGAGCATCTGAATATCGCTTTTTGCGATGAGCTTGAGTATTTACCAGAGAAAATATGGGGAGGTTTGCAATCACTACAATCCATGAGGATTTATTGTTGTAAAAAATTAAAATGCTTGCCAGATGGTATTAGACACCTCACTGCACTTGATTTGTTGAATATTGCTGGATGCCCAATATTGACGGAGCTATGCAAGAAGGGAACAGGGGAAGACTGGAACAAGATAGCGCATATTTCAAAACTTGACATTAGTTAG 3036 0.3778 MAEALLGVVFHNLMSLVQNEFSTLFGIKSKAQKLSRTLELIKAVLQDAEKKQLTDRSIQIWLQQLKDAVYVLDDILDECLIKSSRLKGFKLKNVMFRRDLGTRLKEIASRLNQIAENKNKFLLREGIVVTEKPIEVADWRQTSSIIAEPKVFGREDDKERIVEFLLTQARDSDFLSVYPIVGLGGVGKTTLAQLVYNDDRVSHNFKTKIWVCVSEVFSVKGILCSIIESMTKQKCDAMGLDVIQRKVQEMLQGKRRLLVLDDVWIKSQEFEFGLDHEKWNKLKSVLSGGSKGTSVLVSTRDMEVASIMGTCSTRSLSVLSDDECWLLFKQYAFGHDREESAELVAIGKEIVKKCAGLPLAAQALGCLMHSRSEEKEWFEIKESELWDLPHENSTLPALRLSYFHLSPTLKQCFAFCAIFPKDTKIMKEELIHLWMANEFISSRKNLEVEDVGNMIWNELCQKSFFQDIHMDDDSRDISFKMHDLIHDLARSVVVQECMVLENECLTNMSKSTHHISFISPHPVSLEEVSFTKVESLRTLYQLAYYFEKYDNFLPVKYTLRVLKTSTLELSLLGSLIHLRYLELHNFDIETFPDSIYSLQKLKILKLKDFSNLSCLPEHLSCLQNLRHLVIEDCHLLSRMFRHVGKLSCLRTLSVYIVNSEKGHSLAELRDLNLGGKLEIRGLPNVGSLSEAQEANLMGKKDLDELCLSWLHNDSSVKTTIISDDQVLEVLQPHTNLKSLKIDFYKGLCFPSWIRTLGNLVTLEIKGCMHCERFSSLGKLPSLKTLQITLVSVKYLDDDEFHNGLEVRIFPSLEVLIIDDLPNLEGLLKVEKKEMFPCLSILNINNCPKLELPCLPSVKDLRVRKCTNELLKSISSLYCLTTLTLDGGEGITSFPKEMFGNLTCLQSLTLLGYRNLKELPNEPFNLVLEHLNIAFCDELEYLPEKIWGGLQSLQSMRIYCCKKLKCLPDGIRHLTALDLLNIAGCPILTELCKKGTGEDWNKIAHISKLDIS* 1012
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr1g0681 1011 PRINTS Disease resistance protein signature 177 192 - -
Mtr1g0681 1011 PRINTS Disease resistance protein signature 250 264 - -
Mtr1g0681 1011 PRINTS Disease resistance protein signature 354 368 - -
Mtr1g0681 1011 PRINTS Disease resistance protein signature 596 612 - -
Mtr1g0681 1011 Pfam NB-ARC domain 154 382 IPR002182 GO:0043531
Mtr1g0681 1011 Gene3D - 401 492 IPR036388 -
Mtr1g0681 1011 CDD RX-CC_like 2 116 IPR038005 -
Mtr1g0681 1011 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 137 416 IPR027417 -
Mtr1g0681 1011 Gene3D - 136 313 IPR027417 -
Mtr1g0681 1011 PANTHER DISEASE RESISTANCE PROTEIN RP 28 966 IPR044974 GO:0006952
Mtr1g0681 1011 Coils Coil 31 51 - -
Mtr1g0681 1011 Pfam Rx N-terminal domain 6 92 IPR041118 -
Mtr1g0681 1011 Gene3D - 318 400 IPR042197 -
Mtr1g0681 1011 Gene3D - 6 116 - -
Mtr1g0681 1011 Gene3D Ribonuclease Inhibitor 499 657 IPR032675 -
Mtr1g0681 1011 Gene3D Ribonuclease Inhibitor 855 995 IPR032675 -
Mtr1g0681 1011 Gene3D Ribonuclease Inhibitor 658 854 IPR032675 -
Mtr1g0681 1011 SUPERFAMILY L domain-like 465 924 - -
Mtr1g0681 1011 SUPERFAMILY RNI-like 926 991 - -
Mtr1g0681 1011 PANTHER OS05G0414200 PROTEIN 28 966 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr1g0681 Mtr-Chr1 7650896 7657300 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr1g0681 180 419 WRKY Transcription Factor Family AT5G45050 27.984 4.52e-08 55.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr1g0681 - - mtr:MTR_5g071220 1343.95