Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr1g0659 ATGACTGGAAGTACATCAATGGTATACACTCAGCAATGTGGTATAACGCTTCTTTTGGCTTTGATTCTTAAGAATCTTGGTTTCAGAGCCATCCCTATTATTAGTTATATGAGTCAGGCAAAGAAACTTGGATCCTTGAATGCATTGAAGTCTGGGGAGTGCAATATTCTCCTTTGTAGTGACTTCGTTAGTAAGGGACTAGATATTCCAGCAGTAGATATGGTGATTAACTACAACATCCCTTTGTCTCCAAACGATTATATCTACCGCGTGGGATGGACTGTTGCTCATGTTAATGTTGCCATTTCCTTTGTGAGCCCAGATGAAAGGAGACATTTCAATATAATAGAGAAACATATAGGCAAGAAACTACCATTGTATCCTGCACCATTTGAGGAAGTTTTGCTTTTGGAAGGGCGTGCTATTGAGGCTGAAAGATTAGCACAAGAGGAAATGAAAGAATTCGGTTGGATGAGCGGAGGATACTTAGAAGGGGAGGAGGTACCATTCAGGAGCGGAGCTAGGTTGTCTTGA 534 0.412 MTGSTSMVYTQQCGITLLLALILKNLGFRAIPIISYMSQAKKLGSLNALKSGECNILLCSDFVSKGLDIPAVDMVINYNIPLSPNDYIYRVGWTVAHVNVAISFVSPDERRHFNIIEKHIGKKLPLYPAPFEEVLLLEGRAIEAERLAQEEMKEFGWMSGGYLEGEEVPFRSGARLS* 178
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr1g0659 177 ProSiteProfiles Superfamilies 1 and 2 helicase C-terminal domain profile. 1 135 IPR001650 -
Mtr1g0659 177 PANTHER RNA HELICASE 1 164 - -
Mtr1g0659 177 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 4 134 IPR027417 -
Mtr1g0659 177 SMART helicmild6 17 92 IPR001650 -
Mtr1g0659 177 Gene3D - 2 157 IPR027417 -
Mtr1g0659 177 Pfam Helicase conserved C-terminal domain 19 92 IPR001650 -
Mtr1g0659 177 PANTHER BNAC02G41920D PROTEIN 1 164 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr1g0659 Mtr-Chr1 7383331 7388385 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr1g0659 19 106 Eukaryotic Initiation Factors Gene Family AT5G11170 37.778 8.25e-12 60.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr1g0659 K14777 - mtr:MTR_1g023070 340.502