Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr1g0655 ATGGCTTCTTCAAATGATGATTGGAAGCCAAGACTTGGAATGAAATTTGACACTAGAGAAGAGGCTGAACAGTTTTATCTTGCTTATGGTTTACGTGAGGGCTTCGGAGTTAGAGTACGCTTTACAAACTGGAAGAAAGACGGTAGTGTATCGTCATGTAGGTTTGTTTGTTGTAAGGAAGGAATACGGAAGAAAGAGGATAAATGTGCATATGAAGGAAAAATTCGGAGAGGCGAGACTAGAACGAAATGCTTAGCAAGAATTACACTTTCGAGTAAAAATGGAAAGTTGGTTATCAATGAGTTTGTAGAAAACCATAACCATGATCTACTAAATCGAGAGACAACGCACATGCTTCGATCACATAGAAAGATAACTGAAGTACAAGCATATGAGATTGATATGGCCGATGACTCTGGATTAAGGCAGAAGGAAGTGTATCAACTTATGAGCACACATGCAGGGCATAGCGCTAATGTTGGATTTACAGAGGTGGATGTAAGAAACTATATCACTACAAAAAGACAAAGAAGTATGGTGTATGGTGATGCTGGATATCTTTCACAGTATTTTCAACGACAGTTGTTGGAGAATCCGTCCTTCTTTTATGCATATCAGATGGATATAGATGAACAAATTACAAATGTGTTCTGGTGTGATGCAAATATGATTTTGGATTACGGAGATTCGATCATTTTTGGTGCAGCTCTAATGTATGATGAGACAATTCCATCATTTAAATGGTTGTTTGAAACATTCTTACAAGCACACAACAACAAAAAACCAAAGACGATCTTCACTGACCAAGATCAAGCAATGTCTAGGGCACTTGAAGAAGTGATGCCTGATACTCACCATGGTTTATGCACATGGCATTTGTTGCAGAATGGAATTAAACATCTTGGAAACAGGATGAAGAAATGA 924 0.3799 MASSNDDWKPRLGMKFDTREEAEQFYLAYGLREGFGVRVRFTNWKKDGSVSSCRFVCCKEGIRKKEDKCAYEGKIRRGETRTKCLARITLSSKNGKLVINEFVENHNHDLLNRETTHMLRSHRKITEVQAYEIDMADDSGLRQKEVYQLMSTHAGHSANVGFTEVDVRNYITTKRQRSMVYGDAGYLSQYFQRQLLENPSFFYAYQMDIDEQITNVFWCDANMILDYGDSIIFGAALMYDETIPSFKWLFETFLQAHNNKKPKTIFTDQDQAMSRALEEVMPDTHHGLCTWHLLQNGIKHLGNRMKK* 308
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr1g0655 307 Pfam FAR1 DNA-binding domain 24 111 IPR004330 -
Mtr1g0655 307 Pfam MULE transposase domain 226 296 IPR018289 -
Mtr1g0655 307 PANTHER OS03G0181600 PROTEIN 5 227 - -
Mtr1g0655 307 PANTHER OS03G0181600 PROTEIN 231 302 - -
Mtr1g0655 307 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 231 302 IPR031052 GO:0006355
Mtr1g0655 307 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 5 227 IPR031052 GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr1g0655 Mtr-Chr1 7353514 7354531 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Mtr1g0655 FAR1 1.4e-17 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr1g0655 - - cam:101505629 452.21