Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr1g0636 ATGTTTAGAAATCAATACGATACCGACGTAACAACATGGTCACCGGCGGGAAGACTCTTCCAGGTGGAATACGCCATGGAAGCAGTTAAGCAAGGTTCAGCAGCAATAGGTCTCCGATCCAAAACTCACGTGGTTCTCGCGTGTGTTAACAAAGCCAATTCCGAATTATCTTCTCATCAGAAGAAGATCTTTAAGGTTGATGATCACATCGGTGTTGCCATCGCCGGTCTCACCGCCGATGGCCGTGTTCTTTCCCGGTACATGAGATCTGAATGCATTAACTATAATTACACTTATGAATCGCCTCTTCCTGTTGGTCGTCTCGTTGTTCAGCTCGCCGATAAGGCTCAGGTTTGCACTCAGCGATCATGGAAGCGTCCTTATGGTGTTGGTCTTCTTGTAGCTGGATTAGATGAATCAGGGGCTCACCTCTATTATAACTGCCCAAGCGGAAACTATTTTGAATATCAGGCATTTGCAATCGGTTCACGCTCACAAGCTGCAAAGACATATTTGGAACGCAAATTTAACAATTTCACAGCCTCCTCCCGGGAAGATCTGATCAAAGATGCGCTCATTGCAACTAGGGAGTCCTTGCAAGGTGAAAAGCTCAGGAGCTCCGTATGCACCATTGCTGTGGTTGGAGTTGGTGAGCCATTCCACATTTTGGATCAGGAAACTGTTCAACAGTTGATCGACACTTTTGAGATTGTGAGGGAGGAAGAAACTGCACCTGCTGAACCTGAGGCTGCAGCTGAGCAGGATGCTGCTACAGATCAGGCTTCTGGTGCAGATCAAGGTGGTGCTGGAAACCAAGGTGGGGCCGACCAAGGTGGTTCTCCAATGGACATTTGA 855 0.4772 MFRNQYDTDVTTWSPAGRLFQVEYAMEAVKQGSAAIGLRSKTHVVLACVNKANSELSSHQKKIFKVDDHIGVAIAGLTADGRVLSRYMRSECINYNYTYESPLPVGRLVVQLADKAQVCTQRSWKRPYGVGLLVAGLDESGAHLYYNCPSGNYFEYQAFAIGSRSQAAKTYLERKFNNFTASSREDLIKDALIATRESLQGEKLRSSVCTIAVVGVGEPFHILDQETVQQLIDTFEIVREEETAPAEPEAAAEQDAATDQASGADQGGAGNQGGADQGGSPMDI* 285
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr1g0636 284 ProSitePatterns Proteasome alpha-type subunits signature. 6 28 IPR000426 GO:0006511|GO:0019773
Mtr1g0636 284 SUPERFAMILY N-terminal nucleophile aminohydrolases (Ntn hydrolases) 4 235 IPR029055 -
Mtr1g0636 284 PANTHER PROTEASOME SUBUNIT ALPHA TYPE 1 269 - -
Mtr1g0636 284 MobiDBLite consensus disorder prediction 241 284 - -
Mtr1g0636 284 Pfam Proteasome subunit A N-terminal signature 6 28 IPR000426 GO:0006511|GO:0019773
Mtr1g0636 284 Gene3D Glutamine Phosphoribosylpyrophosphate, subunit 1, domain 1 2 232 IPR029055 -
Mtr1g0636 284 Pfam Proteasome subunit 29 214 IPR001353 GO:0005839|GO:0051603
Mtr1g0636 284 SMART Proteasome_A_N_2 6 28 IPR000426 GO:0006511|GO:0019773
Mtr1g0636 284 ProSiteProfiles Proteasome alpha-type subunit profile. 21 232 IPR023332 -
Mtr1g0636 284 CDD proteasome_alpha_type_1 6 215 IPR035144 GO:0019773
Mtr1g0636 284 PANTHER PROTEASOME SUBUNIT ALPHA/BETA 1 269 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr1g0636 Mtr-Chr1 7200883 7204822 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr1g0636 K02725 - gmx:100792921 477.633
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr1g0636 1 7200883 7204822 Mtr1g0636 1 7200883 7204822 ECH