Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr1g0596 ATGTCTCATCTTCTACTCATGTTAATCTTTATTCTACTGCTAGTGTTCATAGCAAGGATCACATACTCAATAATTTTGCTACCATGGATCATTTCACGTCACTTTCACAAACAAGGCATAAGGGGTCCTTCCTACTGTCTGATCAAAGGCAACTCCGATGAGATCCGCCGTATGTTTGCGGAAGTTCAATCTAAGCCAATGGATTTATGCCACGATATTGTTCATCGTGTGTGTCCATCTTATCATAGGTGGGCTCCTTTGTATGGGAAAATTGTCCTCAGTTGGTATGGGTCGGAGCCCCGACTGATAATATCCGATCCGGTTATAATTAAAGAGGCACTATTGAAAACGGGTGAATTGTTTGAGAAGTTGGAACCTAATCCGTCGTTGAAACGGTTTTATGGAGAAGGAATTCTCTTCTCAAAGGGAAAGAAATGGACCGTTTATAGATCAATTGCTAGTCATGCTTTTAAAATGGAGCATAGTAAGTCTTGGATTCCCCAAATTATAGACACCACAAAATTAATGTTTTGCAAGTGGGAAGATGAGAACAATGGCATTGAAGAATTTGAGATTGATGTGAATAAAGATCTCCAAAAATTTTCAGCTGATGTTATATCTAAAGTTGCTTTTGGAAGTAGCTATGAAGAAGGGAAAGAGATTTTCAAGTTACAAGATCAACATTGTCATCTTGCTAGTCTTTCTATCAGAACTGCTTATTTTCCTGGGTTTAGGTATATACCTACCAAGAAGAATAGAGAAAGAAAGAGAATAGAAAAGAAAACTCGTGAACTAATTAAAGTGTTGATTGACAATAACCATAAAACACAAAACAATTCAGAAAATTTGCTTGCTTTGTTGATGTCTCCTCACAAATTTATCAACAATGAGACACAAAGGCTAGGATTGGATGAGATTATAGATAATTGTAAAAATTTCTATTTGACAGGAAAGGAAACAATTGCCAATTCAGTGAGCTGGGCTATCTTTCTTTTAGGGCTGAATCAAGAATGGCAAAGCAAGGCACGTGAGGAGGTATTTCATGTTTTAGGACATCACACATCCCCAACTGCAGAAACATTAAGTGACCTCAAATTAGTGAGCTTGGTAATTCAAGAAACACTTAGACTTTATCCTGTAGCAGCAGTAATGGTGAGGCAAGCAAGTAAAAGAGTTAACATTGGGAACATTGATATTCTTGCTGGCACACAATTATATATGTCTATAATTTCAGTTCATCATGATACTCAAATATGGGGAGAAGATGCTATTGATTTCAATCCAATGAGATTTACAAAGTCCCAAAAGCATTCATCTTCATATTTTCCATTTGGATTTGGCCCCAACTATTGTGTGGGTCAAAATTTAGCATTGATTGAAATGAAGATTGTTCTTGCCATGCTTTTGCAGAGATATTCTTTTACTGTTTCACCAACATATGTTCATGGACCGATGTTGGTGATGAGTGTGTCACCTCAATATGGCATGCAAATCGTTTTTAGAAGATTATGA 1512 0.3677 MSHLLLMLIFILLLVFIARITYSIILLPWIISRHFHKQGIRGPSYCLIKGNSDEIRRMFAEVQSKPMDLCHDIVHRVCPSYHRWAPLYGKIVLSWYGSEPRLIISDPVIIKEALLKTGELFEKLEPNPSLKRFYGEGILFSKGKKWTVYRSIASHAFKMEHSKSWIPQIIDTTKLMFCKWEDENNGIEEFEIDVNKDLQKFSADVISKVAFGSSYEEGKEIFKLQDQHCHLASLSIRTAYFPGFRYIPTKKNRERKRIEKKTRELIKVLIDNNHKTQNNSENLLALLMSPHKFINNETQRLGLDEIIDNCKNFYLTGKETIANSVSWAIFLLGLNQEWQSKAREEVFHVLGHHTSPTAETLSDLKLVSLVIQETLRLYPVAAVMVRQASKRVNIGNIDILAGTQLYMSIISVHHDTQIWGEDAIDFNPMRFTKSQKHSSSYFPFGFGPNYCVGQNLALIEMKIVLAMLLQRYSFTVSPTYVHGPMLVMSVSPQYGMQIVFRRL* 504
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr1g0596 503 PRINTS E-class P450 group I signature 85 104 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Mtr1g0596 503 PRINTS E-class P450 group I signature 109 130 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Mtr1g0596 503 PRINTS E-class P450 group I signature 201 219 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Mtr1g0596 503 PRINTS E-class P450 group I signature 305 322 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Mtr1g0596 503 PRINTS E-class P450 group I signature 325 351 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Mtr1g0596 503 PRINTS E-class P450 group I signature 368 386 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Mtr1g0596 503 PRINTS E-class P450 group I signature 441 451 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Mtr1g0596 503 PRINTS E-class P450 group I signature 451 474 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Mtr1g0596 503 SUPERFAMILY Cytochrome P450 74 501 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Mtr1g0596 503 PANTHER CYTOCHROME P450 FAMILY 709 PROTEIN 2 498 - -
Mtr1g0596 503 PANTHER CYTOCHROME P450 FAMILY MEMBER 2 498 - -
Mtr1g0596 503 Pfam Cytochrome P450 84 479 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Mtr1g0596 503 Gene3D Cytochrome P450 30 502 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Mtr1g0596 503 PRINTS P450 superfamily signature 316 333 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Mtr1g0596 503 PRINTS P450 superfamily signature 369 380 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Mtr1g0596 503 PRINTS P450 superfamily signature 442 451 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Mtr1g0596 503 PRINTS P450 superfamily signature 451 462 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr1g0596 Mtr-Chr1 6848668 6852159 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr1g0596 22 503 Cytochrome P450 AT1G75130 47.010 5.16e-166 477
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr1g0596 - - mtr:MTR_1g022040 991.875
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr1g0596 1 6848668 6852159 Mtr1g0596 1 6848668 6852159 ECH