Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr1g0585 ATGGCCTTCAATCCAAATCCAAAAACCTTTCTTCTCTTCAACATGTTCCTCTTATTAGGCAATTTAGCATCTGCTACGGTGTTTACCATACAAAACCAATGCAGTTACACCATTTGGCCGGGAACTCTTTCCGGCAATGGGGCTGCAATTCTCGGTCAAGGTGGTTTTTTGCTAGCCCCCGGTGCATCAGTTAGTTTGACCGCACCGGCGGGTTGGTCAGGACGCTTCTGGGCTCGGACTGGTTGCGAATTTGACGGTGCAGGCAATGGAAAATGTGTCACTGGAGATTGTCCCGGTGGACTAAACTGTATCGGAGGAGGTACCCCACCGGTGACATTGGCCGAATTCACTATTGGATCAGCCGGTAATGGCGGCAAGGACTTCTACGACGTGAGCTTGGTAGACGGTTACAATGCAGGCATGGGTGTATGGGCTACAGGAGGCACCGGTGATTGTCAATATGCGGGGTGTGTTGCGGACTTGAATGGTGGATGTCCGGCAGAGCTTAGGGTGAACAGTGGAGGTTCGGTGGTGGCTTGTAAGAGCGCGTGTTTGGCGTTCAATATGGAGGAATTTTGTTGCACCGGCCAACATGCCACGCCACAAACATGTTCGCCTACACATTATTCGGAGATATTTAAGAAAGCTTGCCCAACTGCTTACAGTTATGCTTATGATGATGCTTCTAGCACTTGCACATGTTCTGGTTCCGATTACCATATCACGTTTTGCCCCAATGGATCATCATGA 750 0.4973 MAFNPNPKTFLLFNMFLLLGNLASATVFTIQNQCSYTIWPGTLSGNGAAILGQGGFLLAPGASVSLTAPAGWSGRFWARTGCEFDGAGNGKCVTGDCPGGLNCIGGGTPPVTLAEFTIGSAGNGGKDFYDVSLVDGYNAGMGVWATGGTGDCQYAGCVADLNGGCPAELRVNSGGSVVACKSACLAFNMEEFCCTGQHATPQTCSPTHYSEIFKKACPTAYSYAYDDASSTCTCSGSDYHITFCPNGSS* 250
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr1g0585 249 ProSitePatterns Thaumatin family signature. 88 103 IPR017949 -
Mtr1g0585 249 CDD TLP-PA 27 244 - -
Mtr1g0585 249 SUPERFAMILY Osmotin, thaumatin-like protein 27 246 IPR037176 -
Mtr1g0585 249 SMART tha2 28 245 IPR001938 -
Mtr1g0585 249 PANTHER OS03G0233200 PROTEIN 22 245 IPR001938 -
Mtr1g0585 249 PANTHER PATHOGENESIS-RELATED PROTEIN 5 22 245 - -
Mtr1g0585 249 Pfam Thaumatin family 32 245 IPR001938 -
Mtr1g0585 249 Gene3D Thaumatin 26 245 IPR037176 -
Mtr1g0585 249 PIRSF PR5 4 249 IPR001938 -
Mtr1g0585 249 PRINTS Pathogenesis-related protein signature 27 39 IPR001938 -
Mtr1g0585 249 PRINTS Pathogenesis-related protein signature 75 86 IPR001938 -
Mtr1g0585 249 PRINTS Pathogenesis-related protein signature 88 117 IPR001938 -
Mtr1g0585 249 PRINTS Pathogenesis-related protein signature 235 244 IPR001938 -
Mtr1g0585 249 ProSiteProfiles Thaumatin family profile. 25 247 IPR001938 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr1g0585 Mtr-Chr1 6735908 6737285 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr1g0585 10 249 Receptor kinase-like Gene Family AT5G38280 44.758 3.02e-61 202
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr1g0585 - - gmx:100809378 426.787
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr1g0585 1 6735908 6737285 Mtr1g0585 1 6735908 6737285 ECH