Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr1g0580 ATGAAGTTCAATTTTCCTAAACCAAAACTCTTATTTTTCTTTCTCATTCTCTCCCTCTTGTGTCTTCAATCTCTATCCTCCTCCACCATCAAAAAACATGCCTCAAAAACAAGAAAAACAATCATCAATGATCAATTCAAAGAAGCCCCTCAATTCTACAACTCACCAAATTGTGCCTCCATCACTGAGCCAGAAGAAGACACCGAACATGACACTGGCACATATATCTGCTCCGAGGAAGCAGTCCATGTGGCAATGACATTAGACACAACATATATCCGAGGATCCATGGCTGCAATCCTCTCTGTCCTCCAACACTCATCATGTCCACAAAACATCATCTTTCACTTTGTTTGTTCCTCAAACACTTCACTTCTCCACTCCATAATCTCAAAATCATTCCCATACCTCAAATTCCAAGTCTACAATTTTGATGATTCAATCGTTTCGGGTTTAATCTCAACCTCGATTCGATCAGCACTTGATTGTCCTCTCAATTATGCAAGAAGCTATTTGGCAAATCTAATTCCATTATGTGTAAGAAAAGTTGTGTACTTGGATTCAGACCTTATCTTAGTGGATGATATCACAAAACTTGCATCAACACCATTAGCCGAAAAAAATGCAGTTTTGGCAGCACCAGAGTATTGCAATGCAAATTTCACATTTTACTTCACACCAACATTTTGGTCCAACCCATCTTTGTCTTTAACATTCGCGAATCGAAAAGCTTGTTACTTTAATACCGGGGTTATGGTAATTGATCTAGAAAAATGGCGCGACGGAGATTACACAACAAAGATTGAGGAATGGATGGAATTACAAAAGAGGATGAGAATCTATGAACTTGGTTCATTGCCACCTTTTTTGCTTGTTTTTGCAGGGGAAATTGTTCCAGTGGATCATAGATGGAATCAACATGGTCTTGGTGGTGATAATTTTCGAGGTCTTTGTAGAGATCTTCATCCTGGTCCAGTGAGTTTATTGCATTGGAGTGGAAAAGGTAAACCATGGGTGAGATTGGATGCTAATAGACCTTGTCCTTTGGATGCTCTTTGGGCACCTTATGATCTTTTGCAGACACCATTTTCTCTTGATTCTTGA 1104 0.3922 MKFNFPKPKLLFFFLILSLLCLQSLSSSTIKKHASKTRKTIINDQFKEAPQFYNSPNCASITEPEEDTEHDTGTYICSEEAVHVAMTLDTTYIRGSMAAILSVLQHSSCPQNIIFHFVCSSNTSLLHSIISKSFPYLKFQVYNFDDSIVSGLISTSIRSALDCPLNYARSYLANLIPLCVRKVVYLDSDLILVDDITKLASTPLAEKNAVLAAPEYCNANFTFYFTPTFWSNPSLSLTFANRKACYFNTGVMVIDLEKWRDGDYTTKIEEWMELQKRMRIYELGSLPPFLLVFAGEIVPVDHRWNQHGLGGDNFRGLCRDLHPGPVSLLHWSGKGKPWVRLDANRPCPLDALWAPYDLLQTPFSLDS* 368
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr1g0580 367 PANTHER GLYCOSYLTRANSFERASE 8 DOMAIN-CONTAINING PROTEIN 20 367 - -
Mtr1g0580 367 PANTHER GALACTURONOSYLTRANSFERASE-LIKE 1-RELATED 20 367 - -
Mtr1g0580 367 SUPERFAMILY Nucleotide-diphospho-sugar transferases 82 358 IPR029044 -
Mtr1g0580 367 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 83 347 IPR029044 -
Mtr1g0580 367 Pfam Glycosyl transferase family 8 83 340 IPR002495 GO:0016757
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr1g0580 Mtr-Chr1 6692116 6693706 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr1g0580 43 365 Glycosyltransferase AT3G50760 73.006 1.17e-178 498
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr1g0580 K20893 - gmx:100818099 587.415
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr1g0580 1 6692116 6693706 Mtr1g0580 1 6692116 6693706 ECH
Mtr1g0580 1 6692116 6693706 Mtr3g4166 3 55571706 55573487 PCT