Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr1g0569 ATGTCTTCATTTCTTTGTTCTCTCCTTCTCATTTTCATTTTCACATCTCAACTCACCATAGCTACCACTGACACTGCAAACAAATTCCAATACTTCTGTGATCAAAATAATGATGGTGGTAACTACCCAACAAACAGCACCTACCACACAAACCTTAACACCCTTTTATCCACTCTCACTTCCAACAAAGATATCAACTACGGTTTCTATAATTCCTCTTATGGAAACAACACTGACAAAGTAAACGCGATTGGACTATGTAGAGGAGATGTCAAACTCAATGATTGTCAAAATTGCCTCAAAAATTCAACTGTTCTTCTAACACAACATTGTCAAAACCGAAAAGAAGCAATTGGATGGTACAACGATGAAGAATGCATGTTGCGTTACTCAAACCGTTCAATATTTGGTCTCAACGAAATTGGACCTGCTTATTTTGTTTGGAATACAAACAACGCAACAAATGAGGTTGAGTTTAACAAAGTGGTGAATTTTTTTTTGGATAGTTTAAGAAATAGAGCTGCATCAGGGGACAGTGACCTTAAATATGCTGTAGGAAGTGATGAGGTTGGTCCAAGTAATAACCAAACCATATATGGTCTTGTTCAATGCACACCTGATTTGTCTAAAACATTATGTGATGATTGTTTGGTTCAATCTATCAAAGAAATTTCAAATTGTTGTAACAATAGGTTAGGTGCTAGAATTGTTAGACCCAGTTGTAATTTGAGATATGAAACCAATTCATTCTTCTATCAACCAACGCCATCAGATTCACCCTCGCCATCACCGGTGCCTGTGCCAGTGCCATCTTTCTCAACTCCTCCTCCGTTTGCACAAAACAATACTTCCTCTCAAGGAAATAGCAACACTACTACTGTCGTCATCGCCGTAGTAGTACCAGTTGTTGCTTTCTATTTTAACTTGTTTTCATGTGTAGTTCAAGAAGGAGAAGAAGATGAAGATGTTGAAATTGAAATTTCGGAGTCATTGCAATTCACTTTTGACACAATAAGAGATGCAACAGATGACTTTGCTGCCTCTAATAAACTTGGACAAGGTGGATTTGGGACGGTTTACAAAGGTAGACTCCCCAATGGACAAGAGATTGGTGTCAAAAGGTTGTCGAGGGATTCTGGCCAAGGAGATTTAGAATTTAAGAATGAAGTAGTTTTAGTGGCTAAACTTCAACATCGAAACTTAGTTAGGCTACTTGGTTTCTGTATAGAAGGAAGAGAAAGACTACTTGTATATGAATTTGTTCAGAATAAGAGCCTCGATTACTTCCTTTTTGATCAAACCAAGAGAACACAATTAAACTGGAACAGAAGGTATAAAATCATTGTAGGTACTGCTCGAGGAATTCTTTACCTTCATGAGGATTCTCGGCTGCGTATTATTCATCGTGATCTCAAAGCAAGCAATATTCTCTTAGATGAAGAGATGAATCCTAAGATAGCAGATTTTGGCATGGCTAGACTGTTTGATGTGGACCAAACTCAGGAAAATACAAACAGAATTGTGGGAACCTATGGATATATGGCACCGGAGTATGCAATGCATGGACAATTTTCAGTGAAGTCAGATGTATTTAGTTTTGGTGTATTGATTCTTGAGATTATAAGTGGCCACAAAAACAGTGGCATTCGTCATGGAACTAGTACGGAGTATTTACTCAGCTTTGTATGGAGAAATTGGAGAGATGGGTCACCAACAAATGTTATAGATCCCACATTAAACAATGATTCAGTGAACGAAATAATGAGATGCATCCACATTGGGTTACTTTGTGTTCAAGAAAATGCAGCTAGCAGGCCAACTATGGCTTCTATTGTACTAATGCTTAATAGTCATTCTCTCACTCTCTCGAGACCTTCCGAACCTGCATTTTATGTAGATAGTGGAGCTGGAGACTTTCAAGACATGATGCAATCATTGGAGTCTAGTTCAGTTCAAGAATCAGTAAATGAGGCTTCGATTACGGAGCCATATCCTCGCTAG 2001 0.3823 MSSFLCSLLLIFIFTSQLTIATTDTANKFQYFCDQNNDGGNYPTNSTYHTNLNTLLSTLTSNKDINYGFYNSSYGNNTDKVNAIGLCRGDVKLNDCQNCLKNSTVLLTQHCQNRKEAIGWYNDEECMLRYSNRSIFGLNEIGPAYFVWNTNNATNEVEFNKVVNFFLDSLRNRAASGDSDLKYAVGSDEVGPSNNQTIYGLVQCTPDLSKTLCDDCLVQSIKEISNCCNNRLGARIVRPSCNLRYETNSFFYQPTPSDSPSPSPVPVPVPSFSTPPPFAQNNTSSQGNSNTTTVVIAVVVPVVAFYFNLFSCVVQEGEEDEDVEIEISESLQFTFDTIRDATDDFAASNKLGQGGFGTVYKGRLPNGQEIGVKRLSRDSGQGDLEFKNEVVLVAKLQHRNLVRLLGFCIEGRERLLVYEFVQNKSLDYFLFDQTKRTQLNWNRRYKIIVGTARGILYLHEDSRLRIIHRDLKASNILLDEEMNPKIADFGMARLFDVDQTQENTNRIVGTYGYMAPEYAMHGQFSVKSDVFSFGVLILEIISGHKNSGIRHGTSTEYLLSFVWRNWRDGSPTNVIDPTLNNDSVNEIMRCIHIGLLCVQENAASRPTMASIVLMLNSHSLTLSRPSEPAFYVDSGAGDFQDMMQSLESSSVQESVNEASITEPYPR* 667
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr1g0569 666 SUPERFAMILY Protein kinase-like (PK-like) 326 615 IPR011009 -
Mtr1g0569 666 MobiDBLite consensus disorder prediction 646 666 - -
Mtr1g0569 666 Gene3D Phosphorylase Kinase; domain 1 310 420 - -
Mtr1g0569 666 CDD STKc_IRAK 351 616 - -
Mtr1g0569 666 ProSiteProfiles Gnk2-homologous domain profile. 141 250 IPR002902 -
Mtr1g0569 666 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 4 645 - -
Mtr1g0569 666 Gene3D Transferase(Phosphotransferase) domain 1 421 626 - -
Mtr1g0569 666 ProSiteProfiles Protein kinase domain profile. 345 621 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr1g0569 666 ProSiteProfiles Gnk2-homologous domain profile. 30 135 IPR002902 -
Mtr1g0569 666 Pfam Salt stress response/antifungal 151 247 IPR002902 -
Mtr1g0569 666 Pfam Salt stress response/antifungal 33 132 IPR002902 -
Mtr1g0569 666 SMART serkin_6 345 621 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr1g0569 666 Gene3D - 28 134 IPR038408 -
Mtr1g0569 666 Gene3D - 143 250 IPR038408 -
Mtr1g0569 666 PANTHER CYSTEINE-RICH RECEPTOR-KINASE-LIKE PROTEIN 4 645 - -
Mtr1g0569 666 Pfam Protein tyrosine and serine/threonine kinase 348 613 IPR001245 GO:0004672|GO:0006468
Mtr1g0569 666 ProSitePatterns Serine/Threonine protein kinases active-site signature. 466 478 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr1g0569 Mtr-Chr1 6578574 6583573 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr1g0569 10 666 Receptor kinase-like Gene Family AT4G21410 48.621 0.0 598
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Mtr1g0569 PK_Tyr_Ser-Thr 1.2e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr1g0569 - - lang:109335396 795.808