Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr1g0568 ATGTCTTCATTTCTTTGTTCTCTCCTTCTCATTTTCATTTTCACATCTCAACTCACCACAGCAGACGTTGACCAAGGTAAGAATTTCCAATACTTCTGTGATCAAAATAACGATGGTGGTATCTACACAACCAACAGCACCTACCACACAAACCTTAACACCCTTTTATCCATTCTCACTTCCAACAAAGAAATCAACTACGGTTTCTATAACTCCTCTTATGGCATAAACAGCGACAAAGTAAACGCAATTGGACTATGCAGAGGAGATTTAAAACCGAATGATTGTCGAAATTGTCTCCAAAATTCAACTGTGTTTCTAACACAACGTTGTCAAAATAGAAAACAAGCAATTGGTTGGTACGATGATGATAGATGCATGTTGCGTTACTCAAGCCGTTCAATATTTGGTCTCTATGACACTAGACCTTATTATGAAGCATGGAGTTTGAAGACGGCGATAAATGAAGATGAATTTGATAAAGTGCGGAAAAATTTGTTGGATAATTTAAGAAATAGAGCTGCATCAGGGGACAGTGACCTTAAATATGCTGTAGGAAGTGATGAGGTTGGTCCAAATAATAATCAAACCATATATGGTCTAGCTCAATGCACACCTGATTTGTTTAAAACATTTTGTGATGATTGTTTGGTTCAATCTATCAATGAAATCGCAATATGTTGTAACAACAGGATGAGTGCTAGAGTTGTTAGACCCAGTTGTTATTTGAGATATGAAACCGATTCACTCTTTTATCAACCAACACAAGATTCACCTTCGTCGTTGTCACCATCACCGACGTCAGTCCCATCACTCGCAGCTCCTCCTCCATTTGCAAATAACACTACCTCCTATCCAGGAAAAAGCAACAATTATGGTTCTACCATTGGCATCGCTATAGGAGTACCAATTGCTCTTGTTGCTATGGTCTTCATTTTTATATGCATCTATTTGAAAGTAAGGAAGCCAAAGAAAAGGTTTGAAGAAGTTCAAGAAGAAGAAGACGACGACAAAATTGAAATTACAGAGGGACTGCAATTCCACTTCAACACCATACGTATTGCTACAAATGATTTCTCAGATTCTGATAAACTTGGACAAGGAGGATTCGGAGTTGTTTACAAAGGTAGGCTCTCTAATGGACTAGAAATCGCTATCAAAAGGTTATCAATGAATTCTGGACAAGGAGATCTAGAGTTTAAGAATGAGGTGTTTTTCCTGGCTAAACTTCAACACCGAAATTTAGTTAGATTACTCGGTTTCTGCCTAGAAGGGAGTGAAAGACTACTTATATACGAGTTTGTTCATAATAAAAGTCTTGATTACTTTATTTTTGATCAAGCAAAGAAAGCACAATTAAATTGGGAAAGGCGCTACACAATCATTTTAGGTATTGCTCGAGGCATTCTTTACCTCCATGAGGATTCTCGAGTGCGTGTTATTCATCGTGATCTCAAAGCAAGCAATATTCTCTTAGATAAACGGATGAATCCTAAGATAGCTGATTTTGGCATGGCAAGACTTTTTGGTGTGGACCAAACCCAGGAAAACACAAATAGAATTGTGGGAACCTATGGGTATATGGCACCAGAGTATGCGAGGCATGGACAATTTTCAACAAAATCAGATGTCTTTAGTTTTGGTATATTAGTTCTTGAAATTGTAAGTGGTACAAAAAATAGTTACATCCGTGATGGGGAGAATACGGAATATCTCTCGAGCTTTGCATGGAGAAATTGGAAGGAGGGGACTGCAGCAAATATCATAGATCCAACATTAAACAATGACTCACTAAATGAGATAATGAGATGTATCCATATTGGATTACTTTGTGTTCAAGAGAATGTAGCTAGCAGACCAACCATGGCTTCTGTTGTAGTGACGCTTAATAGCCCTTCTGTTACTCTCCCAATTCCTTTGCAACCTGCATTTCATATAGGGCCTCAAGATATGAAATCGTCAGGTCATAGTTCTGCTCAAGAATCAGTCAATGGGGCTTCAAATACACAGCTATTTCCTCGCTAG 2025 0.3817 MSSFLCSLLLIFIFTSQLTTADVDQGKNFQYFCDQNNDGGIYTTNSTYHTNLNTLLSILTSNKEINYGFYNSSYGINSDKVNAIGLCRGDLKPNDCRNCLQNSTVFLTQRCQNRKQAIGWYDDDRCMLRYSSRSIFGLYDTRPYYEAWSLKTAINEDEFDKVRKNLLDNLRNRAASGDSDLKYAVGSDEVGPNNNQTIYGLAQCTPDLFKTFCDDCLVQSINEIAICCNNRMSARVVRPSCYLRYETDSLFYQPTQDSPSSLSPSPTSVPSLAAPPPFANNTTSYPGKSNNYGSTIGIAIGVPIALVAMVFIFICIYLKVRKPKKRFEEVQEEEDDDKIEITEGLQFHFNTIRIATNDFSDSDKLGQGGFGVVYKGRLSNGLEIAIKRLSMNSGQGDLEFKNEVFFLAKLQHRNLVRLLGFCLEGSERLLIYEFVHNKSLDYFIFDQAKKAQLNWERRYTIILGIARGILYLHEDSRVRVIHRDLKASNILLDKRMNPKIADFGMARLFGVDQTQENTNRIVGTYGYMAPEYARHGQFSTKSDVFSFGILVLEIVSGTKNSYIRDGENTEYLSSFAWRNWKEGTAANIIDPTLNNDSLNEIMRCIHIGLLCVQENVASRPTMASVVVTLNSPSVTLPIPLQPAFHIGPQDMKSSGHSSAQESVNGASNTQLFPR* 675
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr1g0568 674 ProSiteProfiles Gnk2-homologous domain profile. 30 135 IPR002902 -
Mtr1g0568 674 ProSitePatterns Protein kinases ATP-binding region signature. 365 387 IPR017441 GO:0005524
Mtr1g0568 674 MobiDBLite consensus disorder prediction 647 674 - -
Mtr1g0568 674 Gene3D - 141 249 IPR038408 -
Mtr1g0568 674 Gene3D - 27 134 IPR038408 -
Mtr1g0568 674 MobiDBLite consensus disorder prediction 651 674 - -
Mtr1g0568 674 SMART serkin_6 359 634 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr1g0568 674 SUPERFAMILY Protein kinase-like (PK-like) 343 629 IPR011009 -
Mtr1g0568 674 Gene3D Transferase(Phosphotransferase) domain 1 435 635 - -
Mtr1g0568 674 Gene3D Phosphorylase Kinase; domain 1 321 434 - -
Mtr1g0568 674 ProSiteProfiles Gnk2-homologous domain profile. 141 250 IPR002902 -
Mtr1g0568 674 Pfam Salt stress response/antifungal 155 247 IPR002902 -
Mtr1g0568 674 Pfam Salt stress response/antifungal 33 132 IPR002902 -
Mtr1g0568 674 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 4 659 - -
Mtr1g0568 674 Pfam Protein tyrosine and serine/threonine kinase 363 628 IPR001245 GO:0004672|GO:0006468
Mtr1g0568 674 PANTHER CYSTEINE-RICH RECEPTOR-KINASE-LIKE PROTEIN 4 659 - -
Mtr1g0568 674 MobiDBLite consensus disorder prediction 254 276 - -
Mtr1g0568 674 ProSitePatterns Serine/Threonine protein kinases active-site signature. 480 492 IPR008271 GO:0004672|GO:0006468
Mtr1g0568 674 ProSiteProfiles Protein kinase domain profile. 359 634 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr1g0568 674 CDD STKc_IRAK 365 630 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr1g0568 Mtr-Chr1 6571363 6574928 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr1g0568 10 674 Receptor kinase-like Gene Family AT4G21410 48.175 0.0 584
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Mtr1g0568 PK_Tyr_Ser-Thr 1.8e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr1g0568 - - mtr:MTR_0341s0020 918.687