Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr1g0567 ATGTCTTCATTTCTTTGTTCTTTCCTTCTCATATTCATTTTCACATCTCAACTCACCACAGCCAACATTAACAATGATAACAAATTGCAATACTTCTGTGATCAAAATAACGATGGTGGTAACTACACAACCAACAGCACCTATCACAAAAACCTTAACACCCTTCTATCCACTCTCACTTCCAACAAAGATATCAACTACGGTTTCTATAATTCCTCTTATGGAATAAACACCGACAAAGTAAACGCTATTGGACTTTGTAGAGGAGATGTCAAACCCAATGATTGTCAAAATTGCATAAAGAATTCATCTGTCTTTCTAACACAACTTTGTCAAAATCGAAAAGAGGCTATTGGTTGGTATGATGAAGATACATGCATGTTGCGTTACTCATACCGTTCAATATTCGGTCTGAATGAAACTAGACCTTTTTATTTAGGATGGAGTTTGAACAATGCTACAAATGAAGATGAATTTGATAAAGTACTGAAAAATTTATTGGATAATTTAAGAAATAGAGCTTCATCAGGTGATAGTGACCTTAAATATGCTGTTGGAAGTGATGAGGTTGGTCAAAATAATAATCAAACTATATATGCTCTTGTTCAATGCACACCTGATTTGTCTAAATCATTGTGCGATGATTGTTTGGTAAAATCTATCAAAGCAATCCCAAGATGTTGTAACAACAGGTTGGGTGCTAGAATTGTTAGACCAAGTTGTTATTTGAGATATGAAACCGATTCACTCTTCTATCAACAAACACCAGATCCACCCTCATCATTACAAGTGCCACCATTCTCAACTCCTCCGTTTGCACAAAACACTTCCTCTCCAGGAAAAAGCAATAAAAGTACTACTATTGGCATTGCTGTAGGAGTACCAATTGCTCTTGTTCTTATGGTCTTCATTTTTATCTGCATTTATATAAGAGTGAGGGAGCCAGATAAAAGGTTTGAAGAAGTTCAAGAAGAAGAAGACAAAATTAATATTACTACCGAGCAACTGCAATTCGACTTCAACACCATGCGTATTGCTACAAATGATTTCTCAGATTCTAATAAACTTGGAAAAGGAGGATTTGGGTTTGTTTACAAAGGTAGGTTCTCCAACGGGCAAGAGGTTGCTGTCAAAAGGTTATCAATGAATTCCGGACAAGGAGATCTAGAGTTTAAGAATGAAGTATTTTTAGTGGCTAAACTTCAACACCGAAATTTAGTAAGATTACTCGGTTTCTGCCTAGAAGGAAGAGAAAGACTACTTATATATGAGTTTGTTCATAATAAAAGTCTTGATTACTTTATTTTTGATCAAGCAAAAAAAGCGCAATTAAATTGGGGAAGGCGCTACAAAATCATTTTAGGTATTGCTCGAGGCATTCTTTACCTTCACGAGGATTCTCGACTACGTGTTATTCATCGTGATCTCAAAGCAAGCAATATTCTCTTGGATGAAGAGATGAATCCTAAGATAGCTGATTTTGGCATGGCAAGGCTTTTTAGTATTGACCAAACCCAGGAAAACACAAATAGAATTGTGGGAACTTATGGATATATGGCACCTGAGTATGTAATGCAAGGACAGTTTTCAGTAAAATCCGATGTCTTTAGTTTTGGTATATTGGTTTTAGAAATTGTAAGTGGTGCAAAAAACAGTGGCATTCGTGATGGGGAGAATACAGAATATCTCTCAAGCTTTGCATGGAGAAATTGGAAGGAAGGGACTGCAACAAATATCATAGACTCGACATTAAACAATGATTCACGAAATGAAATACTAAGATGTATCCATATTGGATTACTTTGTGTTCAAGAGAATGTAGCTAGCAGGCCAAGCATGGCTTCTGTTGTAGTGATGCTTAATAGTGATTCTGTTACTCTCCCAATGCCTTTGGAACCTGCATTTCATATGGATTGGAGTGACTTTCAAGATACGAACCCGCCAAGCTCAGCTCAAGAATTATCGGTCAACGGGGCCTCAAACACAGAGCTATTTCCTTGCTAG 2004 0.3668 MSSFLCSFLLIFIFTSQLTTANINNDNKLQYFCDQNNDGGNYTTNSTYHKNLNTLLSTLTSNKDINYGFYNSSYGINTDKVNAIGLCRGDVKPNDCQNCIKNSSVFLTQLCQNRKEAIGWYDEDTCMLRYSYRSIFGLNETRPFYLGWSLNNATNEDEFDKVLKNLLDNLRNRASSGDSDLKYAVGSDEVGQNNNQTIYALVQCTPDLSKSLCDDCLVKSIKAIPRCCNNRLGARIVRPSCYLRYETDSLFYQQTPDPPSSLQVPPFSTPPFAQNTSSPGKSNKSTTIGIAVGVPIALVLMVFIFICIYIRVREPDKRFEEVQEEEDKINITTEQLQFDFNTMRIATNDFSDSNKLGKGGFGFVYKGRFSNGQEVAVKRLSMNSGQGDLEFKNEVFLVAKLQHRNLVRLLGFCLEGRERLLIYEFVHNKSLDYFIFDQAKKAQLNWGRRYKIILGIARGILYLHEDSRLRVIHRDLKASNILLDEEMNPKIADFGMARLFSIDQTQENTNRIVGTYGYMAPEYVMQGQFSVKSDVFSFGILVLEIVSGAKNSGIRDGENTEYLSSFAWRNWKEGTATNIIDSTLNNDSRNEILRCIHIGLLCVQENVASRPSMASVVVMLNSDSVTLPMPLEPAFHMDWSDFQDTNPPSSAQELSVNGASNTELFPC* 668
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr1g0567 667 Gene3D Phosphorylase Kinase; domain 1 313 425 - -
Mtr1g0567 667 ProSiteProfiles Protein kinase domain profile. 350 635 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr1g0567 667 ProSiteProfiles Gnk2-homologous domain profile. 141 250 IPR002902 -
Mtr1g0567 667 ProSitePatterns Protein kinases ATP-binding region signature. 356 378 IPR017441 GO:0005524
Mtr1g0567 667 ProSiteProfiles Gnk2-homologous domain profile. 30 135 IPR002902 -
Mtr1g0567 667 MobiDBLite consensus disorder prediction 642 667 - -
Mtr1g0567 667 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 4 650 - -
Mtr1g0567 667 MobiDBLite consensus disorder prediction 640 667 - -
Mtr1g0567 667 MobiDBLite consensus disorder prediction 267 284 - -
Mtr1g0567 667 MobiDBLite consensus disorder prediction 255 284 - -
Mtr1g0567 667 Pfam Salt stress response/antifungal 151 247 IPR002902 -
Mtr1g0567 667 Pfam Salt stress response/antifungal 33 131 IPR002902 -
Mtr1g0567 667 Pfam Protein tyrosine and serine/threonine kinase 353 619 IPR001245 GO:0004672|GO:0006468
Mtr1g0567 667 ProSitePatterns Serine/Threonine protein kinases active-site signature. 471 483 IPR008271 GO:0004672|GO:0006468
Mtr1g0567 667 SMART serkin_6 350 596 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr1g0567 667 Gene3D - 143 249 IPR038408 -
Mtr1g0567 667 Gene3D - 28 134 IPR038408 -
Mtr1g0567 667 Gene3D Transferase(Phosphotransferase) domain 1 426 627 - -
Mtr1g0567 667 PANTHER CYSTEINE-RICH RECEPTOR-KINASE-LIKE PROTEIN 4 650 - -
Mtr1g0567 667 CDD STKc_IRAK 356 621 - -
Mtr1g0567 667 SUPERFAMILY Protein kinase-like (PK-like) 334 653 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr1g0567 Mtr-Chr1 6566677 6570516 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr1g0567 38 666 Receptor kinase-like Gene Family AT4G21410 50.000 0.0 601
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Mtr1g0567 PK_Tyr_Ser-Thr 2.5e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr1g0567 - - mtr:MTR_0341s0020 1020.76