Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr1g0565 ATGGCTATTCCTTCCTTACTTTGCTCTCTCCTAATCATAATTTTCACTTCTCAAACCAAAGCTGATGTTGTATACGATGAAATCAATTTATACCACTACGTTTGTGATCAAGACAACAATAGAGGTAACTACACAACAAATAGCACCTATGACAAAAACCTCAACACACTTTTATCAACTCTCACTTCCAACACAGAAATCAACTACGGTTTCTACAATTTTTCACATGGCGAAAACAGCGACAAAGTCTACGCGATCGGACTATGCCGAGGGGATATTATGCCAAATAGTTGCCGCAGTTGCCTCAGTAGCGCCAGAACAAATCTCACACGTAATTGTCCAAATCGAAAAGAGGCTATTTTTTGGTCAGAAGATGAAAAATGCATGTTACGTTATTCGGACCGATTGATATTAGGAGTAATGGAAGATGTTCCTATGTTTTCTTCAAAAAATGAAAATAATTCAAGTGATGTTGATTTGTCTAATGAAGTTGTTACTACTTTGTTAAATAATTTAACAAGTAGAGCTGTGAAAGGTGATTCTATGATTAAATATGCTGCAGGTAGTCAACCTGGTCCTCAGTATGAAGTTATATATGGTTTGGTTCAATGTACACCTGATTTGTCTGAAACTGATTGTAATTCATGTTTGGTTGAGAATCTTCAACAAATTCCTAGTTGTTGTAATAATAAGATTGGTGGAAGAGTTGTTAGGCCTAGTTGTAACATGAGATTTGAAACTTCTTACCTTTTTTATGAGCCTAGAGCATCGCCGCCACCGCCGCCATCATCACCTCCTCCACCAGCCACTACGAATGGTACTACTTTATCACAAGGAAAAAGCAACAATGGTGCTACCATTGGCATCGCTGTAGGAGTTCCAATTGCTCTTGTTGCTATGGTCTTCATTTTTATCTGCATCTATTTAAGAATAAGGAAGCCAAAGAAAACGTTTGAAGAAATTCAAGAAGAAGAAGATGATGAAGAAGATAAAATTGAAAGTCCTGAGCCACTACAACTCAACTTCAACACCATACGTAATGCTACAAATGACTTCTCGCATTCTAATCAACTTGGAGAAGGCGGATTCGGAGTTGTTTACAAAGGTAGGCTATCCAATGGACAAGAGATTGCTGTTAAAAGGTTGTCAATGAGTTCGGGACAAGGAGATTCGGAGTTTAAGAATGAGGTACTTTTGGTGGCTAAGCTTCAACACCGAAATTTAGTTAGACTACTCGGTTTCTCACTAGAAGGAAGAGAAAGAGTACTTGTATATGAATTTGTTCAAAACAAAAGTCTCGATTATTTCATTTTTGATCGAGTTAAGAAAGCGCAATTAAATTGGGAAATGCGCTACAAAATCATTTTAGGTATTGCTCGAGGCATTCTTTACCTTCACGAGGATTCTCGACTGCGCATTATTCATCGTGATCTCAAAGCAAGTAACATTCTCTTAGATGAAGAAATGAATCCTAAGATATCTGATTTTGGCATGGCAAGACTATTTGGTGTGGACCAAACACAGGAAAACACAAAAAGAATTGTGGGAACCTATGGATATATGGCACCTGAATATGCTATGCACGGACAATTTTCAGTGAAGTCGGATGTATTCAGTTTCGGTATATTGGTTCTTGAAATCGTAAGTGGTTCAAAAAACAGTGGCATTCGCGATGAGGAGAATACTGAGTATCTATCGAGCTTTGCATGGAGGAATTGGAAGGAGGGAACTGCAACAAGTATCATAGATCCCACGTTAAACAATGATTCACGAAATGAAATGTTGAGATGTATACATATTGGATTACTTTGTGTTCAAGAGAATGTAGCTAGCAGGCCAAGCATGGCTACTGTAGTAGTGATGCTAAATAGTGATTCAGTTACTCTCCCAATGCCTTTGGAACCTGCATTTCATATGGATAGCAGAAACCTTCAAGATATGAAATCATGGGGTCATAGTTCAGCTCAAGAATCAGTCAATGGGTCTTCAAATACAGAGCTGTATCCTCGGTAG 2013 0.382 MAIPSLLCSLLIIIFTSQTKADVVYDEINLYHYVCDQDNNRGNYTTNSTYDKNLNTLLSTLTSNTEINYGFYNFSHGENSDKVYAIGLCRGDIMPNSCRSCLSSARTNLTRNCPNRKEAIFWSEDEKCMLRYSDRLILGVMEDVPMFSSKNENNSSDVDLSNEVVTTLLNNLTSRAVKGDSMIKYAAGSQPGPQYEVIYGLVQCTPDLSETDCNSCLVENLQQIPSCCNNKIGGRVVRPSCNMRFETSYLFYEPRASPPPPPSSPPPPATTNGTTLSQGKSNNGATIGIAVGVPIALVAMVFIFICIYLRIRKPKKTFEEIQEEEDDEEDKIESPEPLQLNFNTIRNATNDFSHSNQLGEGGFGVVYKGRLSNGQEIAVKRLSMSSGQGDSEFKNEVLLVAKLQHRNLVRLLGFSLEGRERVLVYEFVQNKSLDYFIFDRVKKAQLNWEMRYKIILGIARGILYLHEDSRLRIIHRDLKASNILLDEEMNPKISDFGMARLFGVDQTQENTKRIVGTYGYMAPEYAMHGQFSVKSDVFSFGILVLEIVSGSKNSGIRDEENTEYLSSFAWRNWKEGTATSIIDPTLNNDSRNEMLRCIHIGLLCVQENVASRPSMATVVVMLNSDSVTLPMPLEPAFHMDSRNLQDMKSWGHSSAQESVNGSSNTELYPR* 671
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr1g0565 670 ProSiteProfiles Gnk2-homologous domain profile. 143 250 IPR002902 -
Mtr1g0565 670 Gene3D Phosphorylase Kinase; domain 1 313 427 - -
Mtr1g0565 670 ProSiteProfiles Protein kinase domain profile. 352 637 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr1g0565 670 Gene3D Transferase(Phosphotransferase) domain 1 428 629 - -
Mtr1g0565 670 SUPERFAMILY Protein kinase-like (PK-like) 337 655 IPR011009 -
Mtr1g0565 670 PANTHER CYSTEINE-RICH RECEPTOR-KINASE-LIKE PROTEIN 6 656 - -
Mtr1g0565 670 ProSiteProfiles Gnk2-homologous domain profile. 32 137 IPR002902 -
Mtr1g0565 670 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 6 656 - -
Mtr1g0565 670 CDD STKc_IRAK 358 623 - -
Mtr1g0565 670 ProSitePatterns Protein kinases ATP-binding region signature. 358 380 IPR017441 GO:0005524
Mtr1g0565 670 Pfam Protein tyrosine and serine/threonine kinase 355 620 IPR001245 GO:0004672|GO:0006468
Mtr1g0565 670 ProSitePatterns Serine/Threonine protein kinases active-site signature. 473 485 IPR008271 GO:0004672|GO:0006468
Mtr1g0565 670 Pfam Salt stress response/antifungal 35 134 IPR002902 -
Mtr1g0565 670 Pfam Salt stress response/antifungal 159 247 IPR002902 -
Mtr1g0565 670 MobiDBLite consensus disorder prediction 252 279 - -
Mtr1g0565 670 SMART serkin_6 352 627 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr1g0565 670 MobiDBLite consensus disorder prediction 649 670 - -
Mtr1g0565 670 MobiDBLite consensus disorder prediction 254 269 - -
Mtr1g0565 670 Gene3D - 144 249 IPR038408 -
Mtr1g0565 670 Gene3D - 31 136 IPR038408 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr1g0565 Mtr-Chr1 6554199 6557847 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr1g0565 24 670 Receptor kinase-like Gene Family AT4G21410 51.506 0.0 632
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Mtr1g0565 PK_Tyr_Ser-Thr 1.5e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr1g0565 - - lang:109335396 815.453