Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr1g0484 ATGGAAAGTGGACTACCTTTGCTTCATTCTCTCTTGCAACATACTCTAAGAAACTTATGCTCATTTCCTACCTCTTCAACTTCTTCCAAATGGGTCTATGCTGTTTTCTGGAGGGTAGTGCCACGTATCTTTCCTCCACCAAGGTGGGAATTTGGAGGGACTTCTCTTGATCGTTCCAAGGGAAATAAAAGAAATTGGATTATTGTATGGGAAGATGGATTCTGTGATTTTAATGAATGTGAGCAAAGGAAGAGTGGATGCTTGAATGAAAGATTTGGAGCTGATGTATTCTTCAAAATGTCTCATGAGGTTTATAGTTATGGAGAAGGATTAGTGGGGAAAGTTGCAGCAGATAATGGTCACAAATGGGTTTATAGTGACACTCAAAATGGGTGTGAAGCTAACTATGTTGGTCCATGGAATGCTTCAATTGATCATCAACCAAGGGCATGGGAGTTTCAGTTAAATTCAGGCATTCAGACTATTGCTGTCATTGCTGTCAAAGAAGGCTTAGTACAACTTGGTTCATTTGACAAGATTGCAGAAGATCTTGATTTAGTACTCAACATACAAAGGAAATTCAGCTACCTCCAAACCATACCAGGATTGCTTTCATTTCAAAGACCACAACACATACCATTTCAACATCCATGCATTACCAAACCAAATTTCCAAATGATGGAAAGCAATGAAATTTCTAAGAACCAAGTAACCAAACTTAATAATATGCAAGATGAAAGATCCAACTATTTCTCCATGATAGCCATAAACTTAGGTAGAAATCATCCACAAAATGGAACATCAATGCCACCACTTTGGTCACCTCCACTTTCTTTGCCTAACAATCACATTCAACTTCATGAAACAAATAGGATCAATAACACAAGCCACAAAGTGAAGATTGAAGAGGGTACATTTCATATTGCTAATTATGGAGATCAAAAAGGAAAGGCAGGGTGGTCCTAA 966 0.381 MESGLPLLHSLLQHTLRNLCSFPTSSTSSKWVYAVFWRVVPRIFPPPRWEFGGTSLDRSKGNKRNWIIVWEDGFCDFNECEQRKSGCLNERFGADVFFKMSHEVYSYGEGLVGKVAADNGHKWVYSDTQNGCEANYVGPWNASIDHQPRAWEFQLNSGIQTIAVIAVKEGLVQLGSFDKIAEDLDLVLNIQRKFSYLQTIPGLLSFQRPQHIPFQHPCITKPNFQMMESNEISKNQVTKLNNMQDERSNYFSMIAINLGRNHPQNGTSMPPLWSPPLSLPNNHIQLHETNRINNTSHKVKIEEGTFHIANYGDQKGKAGWS* 322
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr1g0484 321 Pfam bHLH-MYC and R2R3-MYB transcription factors N-terminal 12 194 IPR025610 -
Mtr1g0484 321 PANTHER TRANSCRIPTION FACTOR MYC/MYB-RELATED 1 288 - -
Mtr1g0484 321 PANTHER TRANSCRIPTION FACTOR MYC/MYB-RELATED 1 288 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr1g0484 Mtr-Chr1 5587383 5590049 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr1g0484 8 198 Basic Helix-Loop-Helix Transcription Factor Gene Family AT2G31280 31.771 3.80e-16 77.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr1g0484 - - cam:101493639 534.643
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr1g0484 1 5587383 5590049 Mtr1g0484 1 5587383 5590049 ECH