Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr1g0445 ATGCATAAAAAACAATTAATGGCATTGTTAATGGTTCCTCAAACAAGTGATTCTCAAGATGCAACCATCACTAAACTTGAATCAGCATATTCTGATTTAGAATCATTACTTCGATCATCGAAACAAATGGAACAAAACATCGAAACAATGGAAACGAGGTTTGATCTTTTACATGGATCAATCACAACAGCATCAAGAAGAGTACACCCTTTACAATCCTTATCCATGTCAAGAAAAGCACTTGATACAAGAATCAATAGAGCAATTTCTCCTGCTCTTGCACTTCTCGAAACTTTCAAACTCGCTGAGTCTCTCCAGAACAATCTCCTTAACCTCTCTTCAAAGCTATCAACAGAAAAGACTCATCAAAAGAGGCTTTCAAAGCTTCTAGATTACATGGATTGTGTTGATCAGTTAAATGAAGCTATTAACTCTATAAGTGAAGTTGTTGAGCCAGTGATTATGAGGCTTCAAGAAGTTGTGGAGTTTATAAGCAGAACAAAAGCTGCTGATCAATACAGAACACAAAGGTTAAGAGAAGCACTTATAACTCTTAAGGCACTTTATGAAACTGAGGTTGATGAAATGAGATTTGAAGGTTTGTTGGATCAAGCTTTGCTTCATATGCAAGATGAGTTTGAGGTTCTTTTGCTTAAATTAAAGCATAGGAAGTTAGGTGATATGTCACATATGCAAAATGGTGGTGAGGACTGTGATGATCATTTTGAGGTTAGCTTTGAATTGGGATCTGAGTTGGAAATTGAAGTGTTGAGAAGAATTTCAAACACTCTTGCTGCCAATGATTGCTTAGATATATGCATTGACATCTATGTTAAGGTAAGATATAAAAGGGCTGCAAAGGCATTGATGAAGTTAAACCCTGATTACCTAAGAACATACACCCCAGAAGGTATTGATGAAATGGAATGGGAAAACTTAGAAACATCAATAACCCTTTGGACACAACACTTTGAAGTTGCAACAAAGAAAGTTCTTTTATCAGAAAAGAAACTTTGCGAAAGCGTTCTAGGCGAAATCATAGATGGGCTAATCCATCCAGAATGCTTTGTGAAAATATCAGACAAGATCATGGCCGTGTTCTTTCGATTCGGAGAAGGTGTCGCCAGAAGTAACAAAGAGCCACAAAAACTGTTCAAACTATTAGACATGTTTGAGTCATTGGAGAAACTCAAACCATATGTACTTGAAATCTTTGATGGTGAATCCGGCGAGGATATCTGTGCGCGCTTTCGCGAGCTTGAGAAGCTAATCATTGATGCATCAAGCAAAGTATTTTGGGAATTCGGGTTGCAAATTGAAGGAAACGTCGACGGTTTTCTCCCGCCTCCACAAGATGGTTCTGTTCCAAAAATTGTTAGATATGCTGTTAACTACCTCAAGTATTTGTCCACGGAGAATTACAGAACAACAATGGCCAAGGTTTTAAGAACGGAACTAACATGGAAAACCGAGTTGATGTTATCGTCGAAACAATCCGAAACAGACGAGGATTTACTGAAGCATGCTATTTGTAATGTAATGGAAGCACTTCAAAGAAACATAGAATCCAAACGTTTGAGTTGTAAGGACAAGATTTTGGTGAATATATTCATGATGAACACATATTGGTATATGTATATGAGAACAAAGAACACAGAACTTGGTGATTTGTTGGGTGAGAAATACATTAAAGAAAGTTACAAAGCAGTGGCAGAAGAATCAGCTTACTTGTATCAGAAGCAAGCTTGGTTGGTTTTGGTGAAGATTTTAGATCAAGATGATGATGATATAAAAGAACAAAAACAAGGCAAGGAAAAAAGCATTGGAAGGTTGGTGAATGAAAAGATTGAGACATTTTTCAAGTGTTTGAGTGAGATTTGTGACAGGCATAGGAGTTTTTATAGTATACCTGATGTTGATTTGAGGGAACAAATGAGGGATTCAACAGTGAAACTTCTTGTGCCAGTTTATGCTGAGTTTTTAGAGTCTTATTCAGGATTTTTGCAAAGGAAAGTTTATCCTAGTCCTCAAAGGTTGCAAGGGTTGCTTGGGAAGGCTTTTGGTTCTACCAATGATTGGAATTTGAATGGTGGACGTAATTCTGGTTCATTGGAAACTGATATCAGAAGGTCTAGATGA 2139 0.3712 MHKKQLMALLMVPQTSDSQDATITKLESAYSDLESLLRSSKQMEQNIETMETRFDLLHGSITTASRRVHPLQSLSMSRKALDTRINRAISPALALLETFKLAESLQNNLLNLSSKLSTEKTHQKRLSKLLDYMDCVDQLNEAINSISEVVEPVIMRLQEVVEFISRTKAADQYRTQRLREALITLKALYETEVDEMRFEGLLDQALLHMQDEFEVLLLKLKHRKLGDMSHMQNGGEDCDDHFEVSFELGSELEIEVLRRISNTLAANDCLDICIDIYVKVRYKRAAKALMKLNPDYLRTYTPEGIDEMEWENLETSITLWTQHFEVATKKVLLSEKKLCESVLGEIIDGLIHPECFVKISDKIMAVFFRFGEGVARSNKEPQKLFKLLDMFESLEKLKPYVLEIFDGESGEDICARFRELEKLIIDASSKVFWEFGLQIEGNVDGFLPPPQDGSVPKIVRYAVNYLKYLSTENYRTTMAKVLRTELTWKTELMLSSKQSETDEDLLKHAICNVMEALQRNIESKRLSCKDKILVNIFMMNTYWYMYMRTKNTELGDLLGEKYIKESYKAVAEESAYLYQKQAWLVLVKILDQDDDDIKEQKQGKEKSIGRLVNEKIETFFKCLSEICDRHRSFYSIPDVDLREQMRDSTVKLLVPVYAEFLESYSGFLQRKVYPSPQRLQGLLGKAFGSTNDWNLNGGRNSGSLETDIRRSR* 713
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr1g0445 712 PANTHER OS08G0519900 PROTEIN 19 687 - -
Mtr1g0445 712 SUPERFAMILY Cullin repeat-like 128 687 IPR016159 -
Mtr1g0445 712 Pfam Exo70 exocyst complex subunit 320 683 IPR046364 GO:0000145|GO:0005546|GO:0006887
Mtr1g0445 712 PANTHER EXOCYST COMPLEX PROTEIN EXO70 19 687 IPR004140 GO:0000145|GO:0006887
Mtr1g0445 712 Coils Coil 26 53 - -
Mtr1g0445 712 Gene3D Exocyst complex component Exo70 167 693 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr1g0445 Mtr-Chr1 5158235 5161070 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr1g0445 16 670 EXO70 exocyst subunit family AT4G31540 28.271 6.96e-71 243
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr1g0445 - - aip:107605596 984.171