Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr1g0394 ATGAACGACTTCAACTTGACCCCTTACCACTTCACCTTGCTCACTACTCTACGACTCACCTCTCTCCACCCGCCGGCGAATTGTAACTGCCAACCGTTAACCTACGCCGGCGTGGCAATGTTAACAGCAAGATCACCGTCACACTCACTCCGTTGTAACAACCACTTCTTGGTGCTGGTGGTGGCAGTTATTCTCCTCCTCCTTCTTCTTCTACCTTATTCCTCTCTCGCTATCCGAACTACTCACTCCGATCGAATCGACTCCCAACTCACCAACTCCACTGCCGACTCCAACGTCTCTCTCTCCACAACATCTCGACAAGGTTCATTCGCCGACATCATTGATCGTGCTCTTCAGCACGAGTTCACCGAAGAAAACGATGATCAAAACCAACAAGTGCCTGAATCGGGAGGTTTCAACAACAGTGTAGCAGAACAACAGGCTGTACTGGAGACTGTAGCCAGAGTCACACCGAACAAAAATGACAGCAAAGATGAAAAGTCATTTCAACTCCATAGAGGTGAAGACACCCCAATGTTAATTGATCGAAAGGACAATGTATTTATCATTTCTAACTTTAAATCCAAGTATCCGGTGCTGCAGCTAGATTTACGATTGATTTCAGACTTGGTAGTTGCTATTGTTTCGGCAACTTGTGGTGGTGTCGCGTTTGCTTTTGCTGGACAACCGGTCATTACTGGCTATCTTCTAGCTGGCTCCATTATTGGTCCCGGAGGCTTTAACTTCATCAATGAAATGGTGCAGGTGGAAACAGTGGCTCAATTCGGCGTGATATTTATTCTTTTTGCATTGGGCCTGGAGTTTTCCATGACAAAGCTTCGAGTTGTTCGATCTGTTGCTGTTCTTGGTGGCTTACTTCAGATTTTTCTATTTATGTGCATGTGTGGTTTTACTGTATCGTTATGTGGTGGTAAAGCTTCAGAAGGGATTTTTGTTGGTGCTTTCCTTTCTATGTCTTCAACAGCAGTGGTTTTGAAGTTTTTGATGGAAAAGAACACTACTAATGCCCTTCATGGACAAGTCACAATTGGGACCCTTATTTTACAGGATTGTGCTGTTGGATTGCTCTTTGCATTGCTTCCAGTTTTGGGTGGCACCTCAGGTGTTTTTCAAGGAGTGTTATCAATGACAAAGCTGTTGGTGACATTGATTGCATTTCTCTCTATTCTGTCAATATTGTCTCGCACTTGCCTTCCGTGGTTGCTTAAACTGATGATAAGTCTGTCGTCACAGACAAATGAACTCTATCAGCTGGCGTCTGTTGCAATCTGCTTGCTTGTAGCCTGGTGTAGCGATAAGCTGGGATTAAGTCTAGAACTAGGTTCCTTTGCTGCTGGAGTGATGATTGCAACCACTGATCTGGCTCCACATACACTAGAACAAATTGAACCCATTTGCAATCTTTTCGCTGCACTTTTCCTTTCAAGCATTGGAATGCTGATTCATGTTCATTTTCTCTGGAACCATGTTGATATTTTGGTAGCATCGGTTATTTTGGTGATTGCTATAAAAACAATCATAATTGCTTCAGTTGTAAAAGGATTTGGTTACAATAACAAGACTTCAGTACTTGTAGGAATGTCCATGGCACAGATAGGAGAATTTGCTTTTGTTCTTCTCAGTCGTGCTTCAAATCTTCATTTAGTTGAGGGTAAGCTATATCTGCTGCTTCTTGGGACCACAGCTCTTAGTCTGGTGACGACTCCTTTACTTTTCAAGCTGATTCCTGCTGTAGTGCATCTTGGTGTGCTATTGAGGTGGTTTTCTCCTGACAGTGCAGTAGAGATTGGATACAAGGTAGATAACCTCCGCTCAGATAGTGGCAAGCAGCGAGTAGTTTTGATAGACCAAGAAGCTCATGATTGTTAA 1890 0.4354 MNDFNLTPYHFTLLTTLRLTSLHPPANCNCQPLTYAGVAMLTARSPSHSLRCNNHFLVLVVAVILLLLLLLPYSSLAIRTTHSDRIDSQLTNSTADSNVSLSTTSRQGSFADIIDRALQHEFTEENDDQNQQVPESGGFNNSVAEQQAVLETVARVTPNKNDSKDEKSFQLHRGEDTPMLIDRKDNVFIISNFKSKYPVLQLDLRLISDLVVAIVSATCGGVAFAFAGQPVITGYLLAGSIIGPGGFNFINEMVQVETVAQFGVIFILFALGLEFSMTKLRVVRSVAVLGGLLQIFLFMCMCGFTVSLCGGKASEGIFVGAFLSMSSTAVVLKFLMEKNTTNALHGQVTIGTLILQDCAVGLLFALLPVLGGTSGVFQGVLSMTKLLVTLIAFLSILSILSRTCLPWLLKLMISLSSQTNELYQLASVAICLLVAWCSDKLGLSLELGSFAAGVMIATTDLAPHTLEQIEPICNLFAALFLSSIGMLIHVHFLWNHVDILVASVILVIAIKTIIIASVVKGFGYNNKTSVLVGMSMAQIGEFAFVLLSRASNLHLVEGKLYLLLLGTTALSLVTTPLLFKLIPAVVHLGVLLRWFSPDSAVEIGYKVDNLRSDSGKQRVVLIDQEAHDC* 630
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr1g0394 629 PANTHER POTASSIUM/PROTON ANTIPORTER-RELATED 55 629 IPR045158 GO:0015386|GO:0071805|GO:1902600
Mtr1g0394 629 Pfam Sodium/hydrogen exchanger family 211 580 IPR006153 GO:0006812|GO:0015299|GO:0016021|GO:0055085
Mtr1g0394 629 Gene3D - 204 587 IPR038770 -
Mtr1g0394 629 PANTHER K(+) EFFLUX ANTIPORTER 6 55 629 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr1g0394 Mtr-Chr1 4440422 4449058 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr1g0394 106 627 Antiporters AT5G11800 79.135 0.0 818
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr1g0394 - - gmx:100811030 914.835