Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr1g0379 ATGGCAGAAACTGCAGTATGGTTTGTCTTGAGACAAGTATACCAACTTCTAAAAGATGAAACAAGATTACTAAAACATGTCCGTAGAGACTTTGAAGACGTTAAGAATGAACTAGAATTCGTTCGCGCTTTCTTAAAAGATGCTGATAAAAGAGCCACTTCGGATGAAGTAAGCATTCAAATTTGGGTGAAACAGTTAAGAGAATTATCTTTTCACATAGAAGATGTCATTGATGCATACATCATGGATGTGGCTCATCACCATCATCATGATCATCATGATGGATTCATAGGCAAACTTCATAATGTTGTTGGATTGATGAAATGGAAAACCTTAAAACCTCGTCATCGAGTAGCGTGTGAGATTCAAGAGATCAAATTAACAATTCATGGAATCAAAGAAAGAAGTGAAAGGTACAATTTTCAACGCTCTGAACAACGAGGATCGTCGATTGTAGAAGATTGTGTTATGGTTAAGTGGCGCGATCCTGATCGACTTGCTTCACTTTTTGTTGAAGAAGGTGAAATTGTTGGGTTTGAGAAGCCTAGAGACGAAATTGTTGATTGGTTGGTTGATGAAGAAGAAAGAACTCGGAGTGTGATTTCGGTGGTTGGAATGGGGGGACTTGGGAAAACAACTCTTGCTAAAAATGTTTTTGATAATCAACAACTGAAAGGTTACTTTGATTGTCGTGCATTTCTGGTGGTTTCTCAATCGTATAGTGTTGAAGCCTTGTTGAGAAGCATGATGATGCAGTTTTCTGAAGAAACTAAAGAGCCTCTTCCTCAAGGTATAAACACGATGGACAAGACGTCACTCATTAATTTTGCAAGGTCTTACTTGAAGAATAAGAGGTATGTGGTTTACTTTGATGATGTATGGAAAGTAGATTTTTGGGATGAGATCCAACTTGCCACACCAGATAATAAGTTAGGAAGTAGGATAATGATCACAACCAGGAATTTGGATGTTGCCAACTATTGTAGGAAAGATTCGGTTGTTCAAGTGCACAAGTTGCAACCCTTGTCTCCAAACAAATCATGGGAACTCATTTGTAACAAGGCGTTTCGATTTGGTTTCAGTGGAAATTGTCCACCAGAGCTCGAAGATATGTCTAAGGAAATTGTTCAAAAATGTGAGGGGTTACCGCTTGCAATTGTGGCTATAGGAGGTCTCTTGTCAACTAAAGATAAAACTGTTTCTGAGTGGAAAAAACTATGCCAAAATCTAAGTTCGGAGTTAGACCGTAATCCACATTTAGCTAATATAACAAGAATTTTAGGCATGAGTTATGATGACTTGCCACATTATTTGAAGTCATGTGTCTTGTATTTTGGTATATACCCAGAAGATTACTCAATTCGGAGTTCAAGGTTGATTCGGCAATGGATAGCAGAGGGGTTTGTTAAACATGAAGTGGGAAAATCTTTGGAGGAAGTTGGAGAGGAATATTTGACAGAGTTGATCCACAGAAGTTTGGTTCATGTCTCCCGTGTTCACTATGATGGTAAAGCGACAAGCTGTCGAATCCATGATTTGTTACGAGAAATGATCATGAGAAAAATGAAGGATTTGAGTTTTTGTCATGTGATGGATGAAGATGGTCATGAACAAATCTCTGATGCAATGATTATTAGGAGATTGGCTATAAATACCAGTTCCAAGAATGTGCTAAGGAGCATTGAAAACTTCCCCATACGCTCCCTATATATATTCGATGCTTTAATAAAATTATCTGATTACTTTGGGAGTAGGTTCTTTGCAAAGTCTAAGCTTTTGAAAGTATTGGACTTGGAAGGTACTTGGTTGGACTATATTCCTGATGATCTTGGAAATATGTTTCACTTAAAGTATTTGAGCTTAAGATATACCAATGTCAAGAATCTTCCTAAATCCATTGGCAAACTACATAATCTAGAAACCTTGGACCTAAAGGGAACACTAATTCACGACTTACCGATTGAAATAAATAAGCTTACAAAGTTGCGTCATCTTTTAGTTTACAACAGAAGAGCACATTTAAGAATTAGTGGTGAAAGTGGGGTGAGAATAATTCAAGGTGTTGGAAGCATGACAGTGTTGCAAAAACTTTATCATGTGGAGGTAGACCATGGTGGGTTAGAACTAATTGCAGAGTTAAAAAAGCTTAAACAATTAAGGAAGTTGGGATTAAAGAATGTAAAGAGAGAATATGGAAATGCTCTTTGTGAGTCAATAGAGGAAATGAAATGCCTTGAATCACTTCATATTAGTGCAATAAATGAAAATGAAGTCATAGACTTGCAATTTATTTCATCTCTACCTCAACTTAGACAACTTCACTTGTTCGGTCGTTTAGAAAAGCTTCCAAATTGGGTTCCAAGACTTGAACAACTTGTTAGACTGTCGATTCGCTTTTCCAAGTTGAAGGACGATCCTTTAAAGTTACTCAAAGATTTGCCAAACTTGCTGCGTCTTGCAATTGTGTGCGATGCATATGATGGAGAAATGTTGCACTTCCAAGTTGGGTTTAAGAAGTTGAACAAACTATATCTTGTGCAGTTGAATAACTTGAATTCCATTTTAATAGACAACGGAACTTTACCTGCCCTTAAACTAATTGAAATGGTGTCTATTCCCAAACTAAGTGAGATTCCCTCTGATTTTCATCTACTAAAGAGCCTTGAAACTCTGCGTTTGGTTAATATGCCTTATGAGTTCAACCAAAGCATTGATCCAAATGGTGGACCGAAGAACTGGGTCATTGAACATGTGAAAATGGTAACTGTTGTAGAGAAGGTTGGTTCAAATTCTGTAGAATTCAGCTATCGCACTATTCGTCATCCAAGGAGTACATGA 2838 0.3732 MAETAVWFVLRQVYQLLKDETRLLKHVRRDFEDVKNELEFVRAFLKDADKRATSDEVSIQIWVKQLRELSFHIEDVIDAYIMDVAHHHHHDHHDGFIGKLHNVVGLMKWKTLKPRHRVACEIQEIKLTIHGIKERSERYNFQRSEQRGSSIVEDCVMVKWRDPDRLASLFVEEGEIVGFEKPRDEIVDWLVDEEERTRSVISVVGMGGLGKTTLAKNVFDNQQLKGYFDCRAFLVVSQSYSVEALLRSMMMQFSEETKEPLPQGINTMDKTSLINFARSYLKNKRYVVYFDDVWKVDFWDEIQLATPDNKLGSRIMITTRNLDVANYCRKDSVVQVHKLQPLSPNKSWELICNKAFRFGFSGNCPPELEDMSKEIVQKCEGLPLAIVAIGGLLSTKDKTVSEWKKLCQNLSSELDRNPHLANITRILGMSYDDLPHYLKSCVLYFGIYPEDYSIRSSRLIRQWIAEGFVKHEVGKSLEEVGEEYLTELIHRSLVHVSRVHYDGKATSCRIHDLLREMIMRKMKDLSFCHVMDEDGHEQISDAMIIRRLAINTSSKNVLRSIENFPIRSLYIFDALIKLSDYFGSRFFAKSKLLKVLDLEGTWLDYIPDDLGNMFHLKYLSLRYTNVKNLPKSIGKLHNLETLDLKGTLIHDLPIEINKLTKLRHLLVYNRRAHLRISGESGVRIIQGVGSMTVLQKLYHVEVDHGGLELIAELKKLKQLRKLGLKNVKREYGNALCESIEEMKCLESLHISAINENEVIDLQFISSLPQLRQLHLFGRLEKLPNWVPRLEQLVRLSIRFSKLKDDPLKLLKDLPNLLRLAIVCDAYDGEMLHFQVGFKKLNKLYLVQLNNLNSILIDNGTLPALKLIEMVSIPKLSEIPSDFHLLKSLETLRLVNMPYEFNQSIDPNGGPKNWVIEHVKMVTVVEKVGSNSVEFSYRTIRHPRST* 946
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr1g0379 945 SUPERFAMILY L domain-like 511 904 - -
Mtr1g0379 945 Pfam Rx N-terminal domain 6 93 IPR041118 -
Mtr1g0379 945 Coils Coil 17 37 - -
Mtr1g0379 945 Gene3D - 431 522 IPR036388 -
Mtr1g0379 945 CDD RX-CC_like 2 134 IPR038005 -
Mtr1g0379 945 PRINTS Disease resistance protein signature 200 215 - -
Mtr1g0379 945 PRINTS Disease resistance protein signature 280 294 - -
Mtr1g0379 945 PRINTS Disease resistance protein signature 379 393 - -
Mtr1g0379 945 PRINTS Disease resistance protein signature 634 650 - -
Mtr1g0379 945 PANTHER DISEASE RESISTANCE PROTEIN RP 30 902 IPR044974 GO:0006952
Mtr1g0379 945 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 165 444 IPR027417 -
Mtr1g0379 945 Gene3D - 342 430 IPR042197 -
Mtr1g0379 945 Gene3D - 4 119 - -
Mtr1g0379 945 Pfam NB-ARC domain 180 433 IPR002182 GO:0043531
Mtr1g0379 945 PANTHER - 30 902 - -
Mtr1g0379 945 Gene3D Ribonuclease Inhibitor 571 908 IPR032675 -
Mtr1g0379 945 Gene3D - 166 336 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr1g0379 Mtr-Chr1 4320300 4324760 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr1g0379 187 398 WRKY Transcription Factor Family AT5G45050 25.926 3.05e-08 55.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr1g0379 K13457 - gmx:100801561 958.747