Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr1g0362 ATGTTGTTTATTAGTGTAATCTTAAATGTTCCTTTGGCTTCAACAATATTCATCTTAGTGACTTTAATGGGAGGATTAGTGGGTTATCTCTATTGGCCATTTTGGAAGTTAAGGAAAGTTCCAGGCCCACCATCTCTGCCTCTTGTAGGACACCTTCCATTGCTAGCAAAGTATGGTCCTGACGTTTTCTCAGTCCTTGCTAAGCAATATGGCCCTATCTACAGATTTCATATGGGAAGACAACCTCTTATAATCATAGCAGATGCAGAGCTTTGTAAAGAAGTGGGAATTAAAAAATTCAAAGAAATTCCAAACAGAAGCATTCCTTCTCCTATCTCTGCTTCTCCTCTTCACCAAAAAGGTCTATTCTTCACCAGGAACTCACAATGGTCTACGATGAGAAATACCATATTATCAGTATACCAACCATCACACTTAGCCAACTTAGTGCCTAAAATGCAATCATTTATTGAATCAGCAACCCAAAATCTTGATGACACCTCAAAAGAAGACATAATATTTTCAAATCTTTCCCTAAGACTAGCAACTGATGTTATTGGAGATGCAGCATTTGGTGTCAACTTTGGTCTCTCTAAGCCTCATTCAATTTGTGAATCAATGAACAATGTAGAACAATCAAGTGCTAATAGTGATGAAGTATCAATTTTCATCAATCAACACATTTACTCCACAACACAACTTAAGATGGACTTGTCTGGTTCCTTCTCAATTATAATTGGCCTAATTGCTCCTATTCTTCAAGAGCCAATAAGGCAGATTTTGAAGAGAATACCAGGCACTATGGATTGGAAAATGGAGTGTACAAATAAAAATTTAACCGGTCGTCTTGATGATATTGTTAAGAAGAGAATGGAAGATAAAAGCCGAACTTCAAAGAACTTCTTGTCGCTTATATTGAATACAAGAGAGTCGAAGAGTGTGTCGGAGAATGTGTTTTCATTTGACTACATAAGTGCCGTTACTTATGAACACTTACTTGCCGGCTCGGCTACCACATCTTTTACATTGTCATCTATTGTTTATTTGGTTGCTGGTCATCCAAATGTTGAGGAAAAATTGCTTCAAGAGATTGATGGATTTGGTCCACATGATAAGATACCTAATGCTAAAGATCTCAATGAAAGTTTTCCATACCTTGATCAGGTGATTAAAGAGGCAATGAGGATTTACACCGTCTCTCCATTAGTTGCTAGAGAAACATCAAATGAAGTAGAAATAGGAGGTTACCTTCTTCCAAAGGGAACATGGGTATGGTTAGCACTTGGAGTTCTAGCAAAAGACTCAAGAAACTATGCAGAGCCAGAAAAATTCAAACCAGAGAGGTTTGACCCAAAATGTGGAGAAATGAAACGAAGGCACCCTTATGCATTCATACCATTTGGAATAGGTCCAAGGGCATGTATTGGACAGAAATTTTCTTTGCAAGAGATCAAGCTTACTTTGATTCATTTGTATAGAAAATATATATTTCGTCATTCACTTAACATGGAAAAACCTGTAGAACTTGAATATGGTTTAGTTCTTAACTTCAAGCATGGTATCAAGCTTAGAGTAATAAAAAGAACATAA 1590 0.3679 MLFISVILNVPLASTIFILVTLMGGLVGYLYWPFWKLRKVPGPPSLPLVGHLPLLAKYGPDVFSVLAKQYGPIYRFHMGRQPLIIIADAELCKEVGIKKFKEIPNRSIPSPISASPLHQKGLFFTRNSQWSTMRNTILSVYQPSHLANLVPKMQSFIESATQNLDDTSKEDIIFSNLSLRLATDVIGDAAFGVNFGLSKPHSICESMNNVEQSSANSDEVSIFINQHIYSTTQLKMDLSGSFSIIIGLIAPILQEPIRQILKRIPGTMDWKMECTNKNLTGRLDDIVKKRMEDKSRTSKNFLSLILNTRESKSVSENVFSFDYISAVTYEHLLAGSATTSFTLSSIVYLVAGHPNVEEKLLQEIDGFGPHDKIPNAKDLNESFPYLDQVIKEAMRIYTVSPLVARETSNEVEIGGYLLPKGTWVWLALGVLAKDSRNYAEPEKFKPERFDPKCGEMKRRHPYAFIPFGIGPRACIGQKFSLQEIKLTLIHLYRKYIFRHSLNMEKPVELEYGLVLNFKHGIKLRVIKRT* 530
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr1g0362 529 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 467 476 IPR017972 GO:0005506|GO:0016705
Mtr1g0362 529 Gene3D Cytochrome P450 30 529 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Mtr1g0362 529 PANTHER CYTOCHROME P450 FAMILY PROTEIN 9 529 - -
Mtr1g0362 529 Pfam Cytochrome P450 41 515 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Mtr1g0362 529 SUPERFAMILY Cytochrome P450 32 528 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Mtr1g0362 529 PRINTS P450 superfamily signature 334 351 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Mtr1g0362 529 PRINTS P450 superfamily signature 388 399 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Mtr1g0362 529 PRINTS P450 superfamily signature 465 474 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Mtr1g0362 529 PRINTS P450 superfamily signature 474 485 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Mtr1g0362 529 PRINTS E-class P450 group I signature 67 86 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Mtr1g0362 529 PRINTS E-class P450 group I signature 181 199 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Mtr1g0362 529 PRINTS E-class P450 group I signature 323 340 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Mtr1g0362 529 PRINTS E-class P450 group I signature 343 369 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Mtr1g0362 529 PRINTS E-class P450 group I signature 387 405 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Mtr1g0362 529 PRINTS E-class P450 group I signature 427 451 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Mtr1g0362 529 PRINTS E-class P450 group I signature 464 474 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Mtr1g0362 529 PRINTS E-class P450 group I signature 474 497 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Mtr1g0362 529 PANTHER THROMBOXANE-A SYNTHASE 9 529 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr1g0362 Mtr-Chr1 4154421 4158273 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr1g0362 78 528 Cytochrome P450 AT2G26170 71.175 0.0 639
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr1g0362 K20771 - gmx:100805689 883.634
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr1g0362 1 4154421 4158273 Mtr3g3777 3 51628516 51637951 PCT