Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Mtr1g0349 | ATGGCATTTGAATTTGGAGTTGTTTTTGTTCTTGTTTTGCTCAGTTGTTTCAATGTCAATTCAGTGGAATCAGATGATGGGTCAACAATGTTGGAGATCAAGAAGTCATTCAGGGATGTGGATAATGTTTTATATGATTGGACTGACTCACCAACATCAGATTATTGTGCTTGGAGAGGGATTACATGTGATAATGTCACCTTCAATGTTGTTGCACTCAATCTTTCTGGTTTGAATCTTGATGGCGAAATTTCGCCTACAATTGGGAAACTTCAAAGCTTGGTGTCTATCGATTTAAAACAAAATCGGTTATCAGGTCAGATACCAGACGAGATTGGCGACTGCTCTCTGTTGCAAACCTTGGACTTTTCGTTTAACGAAATTCGGGGGGATATACCATTTTCAATTTCTAAGCTGAAACAATTGGAATTTCTGGTTTTGAGGAATAATCAGTTGATTGGACCAATTCCTTCAACATTGTCTCAGATTCCTAACTTGAAATATTTGGACCTTGCACACAATAATCTTAGTGGTGAAATTCCAAGGCTTCTATACTGGAATGAAGTTTTGCAGTATCTGGGATTGCGAGGGAATAACTTGGTTGGTTCGCTATCTCCGGACATGTGCCAATTAACTGGATTGTGGTATTTTGATGTGAAAAACAATAGCTTGACAGGAAATATTCCTGAAAACATAGGCAACTGCACCTCCTTCCAAGTCTTGGATTTATCTTCCAACGAGCTAACCGGAGAGATTCCATTCAATATCGGTTTTCTACAAATAGCAACCTTGTCATTGCAAGGCAATAATCTTTCTGGACATATTCCACCCGTGCTTGGTCTCATGCAAGCGCTTACTGTGTTAGACTTGAGTTATAACATGCTAACTGGATCAATCCCTCCTATTTTGGGTAATTTGACTTACACAGCAAAATTGTACTTGCATGGAAATAAGCTGACTGGCTTCATCCCTCCGGAGCTTGGAAATATGACACAGCTTAATTATTTGGAACTGAATGATAATCTCCTAAGTGGACATATCCCTCCCGAGCTTGGAAAGCTTACTTCTCTATTTGACTTAAATGTTGCTAACAACAATCTTGAGGGGCCAATTCCCAGTGACCTTAGCTTGTGTACAAGCCTTACCGGCCTAAATGTGCATGGGAATAAGCTGAATGGAACAATACCTGCTACTTTTCATAGCTTGGAGAGTATGACTTCTCTGAATCTTTCGTCAAACAACCTTCAGGGTCCCATTCCAATTGAATTGTCACGGATTGGTAATTTGGATACATTGGATATTTCAAACAACAAAATATCTGGACCAATTCCTTCTTCCCTTGGTGACTTGGAACATCTTCTGAAGCTGAATCTGAGCAGAAACAATTTAACAGGACCTATTCCCGCAGAGTTTGGTAATCTCAAAAGTATCATGGAAATTGATCTTTCCCATAACCAACTCTCTGAGATGATTCCTGTAGAACTTGGTCAGCTTCAGAGCATAGCATCATTGAGACTTGAAAACAATGACTTAACTGGGGACGTGACATCACTTGTAAATTGTCTTAGTCTCTCTCTGCTTAATGTGTCCTATAACCAGCTAGTTGGTCTTATTCCCACAAGCAACAACTTCACCAGGTTTTCACCTGACAGTTTCATGGGAAACCCAGGTCTTTGTGGTAATTGGCTGAATTCTCCATGTCAAGGTTCTCATCCTACGGAACGTGTTACATTATCTAAGGCAGCTATACTGGGAATTACTCTTGGTGCCCTTGTAATTCTTCTGATGATACTGCTGGCTGCTTTCCGACCACACCATCCGTCTCCGTTTCCGGATGGATCACTCGAGAAACCTGGTGACAAATCAATTATTTTCTCACCTCCGAAGCTAGTGATTCTTCATATGAACATGGCACTTCATGTGTACGACGATATCATGAGGATGACTGAAAACCTGAGTGAGAAGTATATAGTTGGAAGTGGTGCGTCTAGTACGGTTTATAAATGTGTTCTTAAAAATTGCAAGCCTGTTGCCATTAAGAGGCTCTATTCTCACTATCCGCAATACTTGAAAGAATTCGAGACTGAACTTGCGACAGTCGGCAGCATTAAGCACCGGAATCTGGTCTGTCTCCAAGGCTACTCTTTGTCACCATATGGCCACCTTCTCTTTTATGACTACATGGAAAATGGTAGTCTATGGGATCTTCTTCATGGGCCAAGTAAGAAGAAAAAACTTGATTGGCATCTGCGTTTGAAAATAGCACTTGGAGCAGCGCAAGGGCTCTCATATTTACACCATGATTGCAGTCCTCGCATCATCCACAGGGATGTGAAATCTTCAAATATTTTACTAGACTCAGATTTTGAGCCACATCTCACAGATTTTGGCATTGCCAAAAGCCTATGCCCTACAAAGTCCCATACTTCTACTTACATAATGGGCACAATTGGATACATAGACCCTGAGTATGCCAGAACTTCCCGACTCACGGAGAAATCCGATGTCTACAGCTATGGTATTGTTTTGCTTGAATTGCTAACTGGGAGAAAAGCTGTTGACAATGAGTCCAACCTCCATCATCTAATTTTGTCCAAGACAGCTAGCAATGCAGTAATGGAAACGGTTGATCCCGACGTAACTGCCACATGCAAGGACCTAGGAGCAGTAAAGAAAGTTTTTCAGCTTGCTCTATTATGCACAAAGAGGCAGCCAGCCGATAGACCAACGATGCATGAAGTTTCACGTGTATTAGGAAGTCTCATGCCGTCAGTCGCTCCCGCGAAACAACTAACTCCTCTACAGCCGGCATCTCATCCATCTGCCAAAGTTCCATGCTACATGGATGAGTATGCAAATCTCAAGACTCCTCATTTGGTCAACTGTCCTTCCATGAGCACTTCAGATGCTCAACTCTTTCTCAAGTTTGGAGAAGTTATCTCCCAGAACAGTGAGTGA | 2958 | 0.4162 | MAFEFGVVFVLVLLSCFNVNSVESDDGSTMLEIKKSFRDVDNVLYDWTDSPTSDYCAWRGITCDNVTFNVVALNLSGLNLDGEISPTIGKLQSLVSIDLKQNRLSGQIPDEIGDCSLLQTLDFSFNEIRGDIPFSISKLKQLEFLVLRNNQLIGPIPSTLSQIPNLKYLDLAHNNLSGEIPRLLYWNEVLQYLGLRGNNLVGSLSPDMCQLTGLWYFDVKNNSLTGNIPENIGNCTSFQVLDLSSNELTGEIPFNIGFLQIATLSLQGNNLSGHIPPVLGLMQALTVLDLSYNMLTGSIPPILGNLTYTAKLYLHGNKLTGFIPPELGNMTQLNYLELNDNLLSGHIPPELGKLTSLFDLNVANNNLEGPIPSDLSLCTSLTGLNVHGNKLNGTIPATFHSLESMTSLNLSSNNLQGPIPIELSRIGNLDTLDISNNKISGPIPSSLGDLEHLLKLNLSRNNLTGPIPAEFGNLKSIMEIDLSHNQLSEMIPVELGQLQSIASLRLENNDLTGDVTSLVNCLSLSLLNVSYNQLVGLIPTSNNFTRFSPDSFMGNPGLCGNWLNSPCQGSHPTERVTLSKAAILGITLGALVILLMILLAAFRPHHPSPFPDGSLEKPGDKSIIFSPPKLVILHMNMALHVYDDIMRMTENLSEKYIVGSGASSTVYKCVLKNCKPVAIKRLYSHYPQYLKEFETELATVGSIKHRNLVCLQGYSLSPYGHLLFYDYMENGSLWDLLHGPSKKKKLDWHLRLKIALGAAQGLSYLHHDCSPRIIHRDVKSSNILLDSDFEPHLTDFGIAKSLCPTKSHTSTYIMGTIGYIDPEYARTSRLTEKSDVYSYGIVLLELLTGRKAVDNESNLHHLILSKTASNAVMETVDPDVTATCKDLGAVKKVFQLALLCTKRQPADRPTMHEVSRVLGSLMPSVAPAKQLTPLQPASHPSAKVPCYMDEYANLKTPHLVNCPSMSTSDAQLFLKFGEVISQNSE* | 986 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Mtr1g0349 | 985 | SUPERFAMILY | Protein kinase-like (PK-like) | 630 | 918 | IPR011009 | - | |
| Mtr1g0349 | 985 | Pfam | Protein kinase domain | 655 | 914 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
| Mtr1g0349 | 985 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 773 | 785 | IPR008271 | GO:0004672|GO:0006468 | |
| Mtr1g0349 | 985 | ProSiteProfiles | Leucine-rich repeat profile. | 165 | 187 | IPR001611 | GO:0005515 | |
| Mtr1g0349 | 985 | Gene3D | Transferase(Phosphotransferase) domain 1 | 728 | 930 | - | - | |
| Mtr1g0349 | 985 | ProSiteProfiles | Protein kinase domain profile. | 652 | 925 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
| Mtr1g0349 | 985 | PANTHER | LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED | 8 | 972 | - | - | |
| Mtr1g0349 | 985 | ProSitePatterns | Protein kinases ATP-binding region signature. | 658 | 680 | IPR017441 | GO:0005524 | |
| Mtr1g0349 | 985 | PANTHER | LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE ERECTA | 8 | 972 | - | - | |
| Mtr1g0349 | 985 | SUPERFAMILY | L domain-like | 257 | 559 | - | - | |
| Mtr1g0349 | 985 | SMART | LRR_typ_2 | 450 | 473 | IPR003591 | - | |
| Mtr1g0349 | 985 | SMART | LRR_typ_2 | 91 | 115 | IPR003591 | - | |
| Mtr1g0349 | 985 | SMART | LRR_typ_2 | 211 | 235 | IPR003591 | - | |
| Mtr1g0349 | 985 | SMART | LRR_typ_2 | 474 | 498 | IPR003591 | - | |
| Mtr1g0349 | 985 | SMART | LRR_typ_2 | 163 | 187 | IPR003591 | - | |
| Mtr1g0349 | 985 | SMART | LRR_typ_2 | 402 | 426 | IPR003591 | - | |
| Mtr1g0349 | 985 | SMART | LRR_typ_2 | 282 | 306 | IPR003591 | - | |
| Mtr1g0349 | 985 | SMART | LRR_typ_2 | 330 | 354 | IPR003591 | - | |
| Mtr1g0349 | 985 | Gene3D | Phosphorylase Kinase; domain 1 | 628 | 727 | - | - | |
| Mtr1g0349 | 985 | Pfam | Leucine rich repeat | 428 | 487 | IPR001611 | GO:0005515 | |
| Mtr1g0349 | 985 | Gene3D | Ribonuclease Inhibitor | 262 | 570 | IPR032675 | - | |
| Mtr1g0349 | 985 | Gene3D | Ribonuclease Inhibitor | 187 | 261 | IPR032675 | - | |
| Mtr1g0349 | 985 | Gene3D | Ribonuclease Inhibitor | 23 | 186 | IPR032675 | - | |
| Mtr1g0349 | 985 | SUPERFAMILY | L domain-like | 26 | 320 | - | - | |
| Mtr1g0349 | 985 | Pfam | Leucine rich repeat N-terminal domain | 24 | 64 | IPR013210 | - | |
| Mtr1g0349 | 985 | SMART | serkin_6 | 652 | 925 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
| Mtr1g0349 | 985 | Pfam | Leucine Rich Repeat | 165 | 183 | IPR001611 | GO:0005515 |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Mtr1g0349 | Mtr-Chr1 | 3976472 | 3984434 | Transposed |
Functional genes information
| Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
|---|---|---|---|---|---|---|---|---|
| Mtr1g0349 | 93 | 984 | Receptor kinase-like Gene Family | AT5G07180 | 64.502 | 0.0 | 1125 |
Transcription factors information
| Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
|---|---|---|---|---|---|---|---|
| PK | RLK-Pelle_LRR-XIIIb | Mtr1g0349 | Pkinase | 1.5e-43 | CL0016 |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Mtr1g0349 | K20718 | - | gmx:100782307 | 1682.54 |