Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr1g0334 ATGGAGGTGTTGTTGTATGTGGTTACGGTGTCAATAAGAGTAGGTAACTTAGTCTGCAATAACTCAATCATAGCTACACACATGGATGCATCCAGATTTAAGGTGATGGCAGATGCAGGGTCATTGTCCAATTCTGTAGCTAAGGTTTCCAATGAAACGGTTGTAGGTTCGGACGATTGTCATGATAATGGTGGCAATTTGGATGTTGAAATCGGTATTACAAAAGTCACTCAACCGGTTTTGGAAAAGGAAGGAGAAAGTCCTTTGATGGATATGATATCCCAAAATAAAGGTGTTTTAGTTGCTAGTGATGTAGGATTAGCCCCAGAAAGTGAGGATGATGATTCATTGTCATTGGAAGGTGAACAATTTATTGATAGCTCATGTTCTCTATCAGTTGTCAGTGAAAACAGTAGTATAGGCGGAGAAGAGTTCATTGCTTCTGATAATACTTCAGAAGTTGGGACACCATGTTCGATAGACATAGAAAAGATCGTCAGTTCTGTCAATATTGTTGCTCAAACCGCTGATTTGGGGGAGTCAAATGTTGACACAGATATTATGAATGAACCCCTTGCTGTGGCAGTGAATCTTGACCAAGAGATTGGAGTTGAATCAGACCTAAAGCCTTCTACAGTTGCTCATCAGCTGCCTCAGGAAGAGGGAACAAGTGTAGCAGTTGTCCGGAGTGTTTTTGAATTGGATTATACCCCGTTATGGGGATTCATATCACTATGTGGACGAAGACCAGAAATGGAAGATGCAGTTGCAACTGTTCCTCGGTTTTTAGAAATTCCCATTCAGATGTTAATTGGTGATCGAGCACCTGATGGAATAAACCGGTGTTTTAGGCCGCAAATGACCCATTTCTTTGGAGTCTATGATGGCCATGGTGGCTCTCAGGTTGCAAATTATTGTCGTGAACGCATCCATATTGCATTGACCGAGGAAATAGAACTTGTCAAGGAAAGTCTAATCGATGGAGGACTCAATGATGGTTGCCAAGATCAATGGAAAAAAGTTTTCACCAATTGTTTCTTAAAGGTTGATGCAGAAGTTGGAGGAACGACTAATAATGAAGTTGTTGCGCCAGAAACTGTTGGCTCCACTGCTGTTGTTGCTCTTATATCTTCATCCCATATTATAGTTGCAAACTGTGGTGATTCGAGAGCCGTTCTTTGTCGTGGCAAAGAACCAATGGCGTTATCAGTGGACCATAAACCGAACCGAGAAGATGAATATGCAAGAATTGAAGCAGCCGGAGGAAAAGTGATACAGTGGAATGGTCATCGTGTATTTGGTGTTCTTGCAATGTCAAGATCTATTGGAGACAGGTATTTGAAACCGTCAATTATTCCGGATCCAGAAGTTCAATTCATTCCTCGTGCAAAAGAGGATGAATGTCTCATTTTGGCTAGTGATGGTCTATGGGATGTGATGACAAATGAAGAGGTTTGTGACCTGGCTCGAAAACGTATACTTCTTTGGTACAAGAAAAACGGCATGGAACTACCCTCGGAAAGGGGAGAGGGTAGTGATCCTGCGGCACAAGCAGCAGCAGAGTTGCTATCGAATCGCGCTCTCCAGAAAGGAAGCAAAGACAACATCACTGTGATTGTTGTGGATCTGAAACCTCAACGAAAGTATAAGAACAAAACATGA 1662 0.4206 MEVLLYVVTVSIRVGNLVCNNSIIATHMDASRFKVMADAGSLSNSVAKVSNETVVGSDDCHDNGGNLDVEIGITKVTQPVLEKEGESPLMDMISQNKGVLVASDVGLAPESEDDDSLSLEGEQFIDSSCSLSVVSENSSIGGEEFIASDNTSEVGTPCSIDIEKIVSSVNIVAQTADLGESNVDTDIMNEPLAVAVNLDQEIGVESDLKPSTVAHQLPQEEGTSVAVVRSVFELDYTPLWGFISLCGRRPEMEDAVATVPRFLEIPIQMLIGDRAPDGINRCFRPQMTHFFGVYDGHGGSQVANYCRERIHIALTEEIELVKESLIDGGLNDGCQDQWKKVFTNCFLKVDAEVGGTTNNEVVAPETVGSTAVVALISSSHIIVANCGDSRAVLCRGKEPMALSVDHKPNREDEYARIEAAGGKVIQWNGHRVFGVLAMSRSIGDRYLKPSIIPDPEVQFIPRAKEDECLILASDGLWDVMTNEEVCDLARKRILLWYKKNGMELPSERGEGSDPAAQAAAELLSNRALQKGSKDNITVIVVDLKPQRKYKNKT* 554
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr1g0334 553 Pfam Protein phosphatase 2C 277 536 IPR001932 -
Mtr1g0334 553 SMART PP2C_4 225 541 IPR001932 -
Mtr1g0334 553 CDD PP2Cc 244 543 IPR001932 -
Mtr1g0334 553 SUPERFAMILY PP2C-like 229 545 IPR036457 -
Mtr1g0334 553 PANTHER ALPHABET, ISOFORM E-RELATED 105 553 - -
Mtr1g0334 553 ProSitePatterns PPM-type phosphatase domain signature. 290 298 IPR000222 GO:0043169
Mtr1g0334 553 Gene3D - 226 553 IPR036457 -
Mtr1g0334 553 PANTHER PROTEIN PHOSPHATASE 2C FAMILY PROTEIN 105 553 - -
Mtr1g0334 553 ProSiteProfiles PPM-type phosphatase domain profile. 239 543 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr1g0334 Mtr-Chr1 3776005 3781637 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr1g0334 137 553 PP2C-type Phosphatase Gene Family AT1G17550 55.841 1.11e-160 466
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr1g0334 K14497 - gmx:100805281 825.083