Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr1g0331 ATGGAAGCAGAGATGAAAGAATTGAGACTCAAACTTAGGCAAACAATGACCATGTACAAATCAGCTTGCAAAGAAGCAATTTCAGCCCAAAATAAGGCTAATGAGATTACTCAATGGAAAATGGAGGAGGAACGTATGGTAGAGGAAGTTATAATGTCAAAAGAAGCAGCATTGGCATTAGCAGAAAAGGAGAAAGCTAAAGCAAAAGCTGCAATCAAAGCAGCTGATGAAGCTATGAGAATAGCAGAAAAAGAAGCACAAAGAAGAATGCAAGTCGAGAAGACGGCTAAGAAAGATATAGAAGAGAGAGATCAAGCACTAAATGTGTTGGCTCGTAAAGATATTCGATATAGACAATACACCTTAGACGAAATTGAAAAGGCTACTCAAAATTTCTCATTATCAATGAAAATAGGTGAAGGTGGATATGGACCTGTGTTTAAAGGTCAACTTGATCATACAAATGTTGCAATCAAAATTTTAAGACCTGATGCCAATCAGGGTAGAAAACAGTTCCTACAAGAGGTTGAGGTATTATGCAACATAAGACATCCCAATATGGTCCTCCTCCTTGGTGCATGTCAAGAATATGGATGTTTGGTATATGAATACATGGACAATGGTAGCTTAGAAGACAGATTATTAAGAAAACGAAACACCCCTCCAATTCCATGGCGAAAACGTTTCGAAATAGCTTATGAAATTGCAACAGCACTTCTTTTCCTTCACCAAACAAAACCAGAAGCAATTGTTCATAGAGACCTTAAACCAGCCAACATTCTCTTAGACAAAAATTTTGTTAGCAAAATAAGTGATGTTGGTTTAGCAAGATTAGTACCACCTTCTGTAGCTGATTCTGTCACACAATATCACATGACTGAAGCAGCTGGAACATTATGTTACATTGATCCAGAGTATCAAAATACAGGAAAATTAACAACAAAATCAGATATTTATTCTTTAGGGATAATGTTTCTTCAAATTATCACAGCTAAGCCTCCAATGGGACTTTCTCATCATGTTAAAAGGGCAATTGAAAATGAGAATTTTTTCGATATGCTTGATCCCGATGTTACTGATTGGCCTGTTGATGAAGCTTTGGCGTTTGCTAAAATTTCTTTGAGATGTGCTGAGCTTAGTAAAAAAGATAGACCGGATCTTGCGTTAGAAGTGATTCCGGAGCTTAATCGATTAAAAGATTTTGGATGTGACTTACAAAACTATCAACATAATCAAAGTCATCCATCGGGTCCTCTTACGCCTCCTCAAAGTCCACTTTGA 1281 0.3692 MEAEMKELRLKLRQTMTMYKSACKEAISAQNKANEITQWKMEEERMVEEVIMSKEAALALAEKEKAKAKAAIKAADEAMRIAEKEAQRRMQVEKTAKKDIEERDQALNVLARKDIRYRQYTLDEIEKATQNFSLSMKIGEGGYGPVFKGQLDHTNVAIKILRPDANQGRKQFLQEVEVLCNIRHPNMVLLLGACQEYGCLVYEYMDNGSLEDRLLRKRNTPPIPWRKRFEIAYEIATALLFLHQTKPEAIVHRDLKPANILLDKNFVSKISDVGLARLVPPSVADSVTQYHMTEAAGTLCYIDPEYQNTGKLTTKSDIYSLGIMFLQIITAKPPMGLSHHVKRAIENENFFDMLDPDVTDWPVDEALAFAKISLRCAELSKKDRPDLALEVIPELNRLKDFGCDLQNYQHNQSHPSGPLTPPQSPL* 427
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr1g0331 426 Pfam Protein kinase domain 134 368 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr1g0331 426 Gene3D Transferase(Phosphotransferase) domain 1 205 413 - -
Mtr1g0331 426 PANTHER OS02G0152300 PROTEIN 1 425 - -
Mtr1g0331 426 SUPERFAMILY Protein kinase-like (PK-like) 115 387 IPR011009 -
Mtr1g0331 426 MobiDBLite consensus disorder prediction 406 426 - -
Mtr1g0331 426 ProSiteProfiles Protein kinase domain profile. 132 395 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr1g0331 426 Gene3D Phosphorylase Kinase; domain 1 110 204 - -
Mtr1g0331 426 PANTHER ADENINE NUCLEOTIDE ALPHA HYDROLASE-LIKE DOMAIN KINASE 1 425 - -
Mtr1g0331 426 ProSitePatterns Serine/Threonine protein kinases active-site signature. 250 262 IPR008271 GO:0004672|GO:0006468
Mtr1g0331 426 SMART serkin_6 132 392 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr1g0331 426 Coils Coil 51 103 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr1g0331 Mtr-Chr1 3750630 3752577 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr1g0331 1 404 Receptor kinase-like Gene Family AT5G12000 70.297 0.0 585
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-IXb Mtr1g0331 Pkinase 3.8e-43 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr1g0331 - - aip:107647694 571.237