Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr1g0321 ATGTCTCTAATCTTCAGAATTTTTCTCCTTGGAGTTTTGGGAGTTGTAGCTCAGCTTTTTGGATATAAAGGACTTGAATACACAACACCTACTCTTGCTTCATCTCTTTCCAACCTTATACCTGCTTTTACATTCATCCTAGCTATCATTTTCAGGATGGAGAAGGTAAAATTAAGATGGAAAAGCAGTCAAGCAAAAATCTTGGGTTCTACGGTATCAATATTAGGTGCACTCCTAGTTGTTCTTTATAAGGGTCCAATAATCATACCCTCACCATCAACACAATCACCACCTATTATTCATTCTCCAATCACTTCTTCAACAACAGAATCAAATTGGATTCTTGGTGGATCTCTACTTGTTATTGAGATTCTTATTGTTCCAATATGGTACATTATTCAGGTATATTGA 411 0.3577 MSLIFRIFLLGVLGVVAQLFGYKGLEYTTPTLASSLSNLIPAFTFILAIIFRMEKVKLRWKSSQAKILGSTVSILGALLVVLYKGPIIIPSPSTQSPPIIHSPITSSTTESNWILGGSLLVIEILIVPIWYIIQVY* 137
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr1g0321 136 Pfam EamA-like transporter family 5 81 IPR000620 GO:0016020|GO:0016021
Mtr1g0321 136 PANTHER WAT1-RELATED PROTEIN 1 134 - -
Mtr1g0321 136 SUPERFAMILY Multidrug resistance efflux transporter EmrE 5 84 - -
Mtr1g0321 136 PANTHER WAT1-RELATED PROTEIN 1 134 IPR030184 GO:0016021|GO:0022857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr1g0321 Mtr-Chr1 3624199 3625762 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr1g0321 3 134 Nodulin-like Gene Family AT5G40240 53.333 3.38e-41 139
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr1g0321 - - mtr:MTR_1g014510 220.32