Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr1g0306 ATGATAACTTGGAACCTTTTTCAAGCAAGAATAACCTCTACACACGCAATATTGTTATCGTTTCTTCTTCATTTTTTGGCTAAAGAAGCTGTTGTATCTGAGAATCTTGTTGAATATTCAACTTGTGATATGGGCTATCTCAATTCTGTTTTATCACCTTCAAGTCAGGTTCATGCTGCTGATGATACACCTGTTAGTGGTGGAGGGCTCAGCCAGAATGGAAAATTCAGCTATGGATATGCTAGCTCCCCTGGCAAGAGATCTTCAATGGAAGATTTTTATGAGACAAGAATTGACGGCATTAATGGCGAAGTTGTTGGCCTTTTTGGAGTTTTTGATGGTCATGGTGGTGCTCGCGCTGCTGAGTATGTCAAGCAAAACCTATTTAGTAATTTGATCAGCCATCCAAAATTCATTTCTGACACCAAATCTGCAATAGCTGATGCGTATACGCATACCGACTCTGAATTTCTGAAATCAGAGAATAATCAAAACAGAGATGCTGGATCAACTGCTTCCACTGCCATTCTTGTTGGTGACCGTTTGCTTGTTGCAAATGTTGGGGACTCCAGAGCTGTTATATGCAGGGGTGGAAATGCCATTGCTGTGTCCCGAGACCACAAACCAGACCAAACCGACGAGAGGCAAAGGATAGAAGATGCGGGAGGCTTTGTTATGTGGGCTGGAACTTGGAGAGTCGGTGGTGTTCTTGCTGTTTCTCGTGCATTTGGTGATAGACTCCTTAAGCAATACGTTGTTGCTGATCCGGAAATCCAGGAAGAAAAGGTTGATAGCTCTCTTGAATTTCTTATATTGGCTAGTGATGGACTATGGGATGTTGTCTCAAATGAGGAAGCTGTTGCTATGATTAAACCAATTGAGGATGCAGAAGAAGCAGCAAAGAGGCTGATGAAAGAAGCGTATCAGAGAGGTAGTTCTGACAACATTACTTGTGTCGTCGTTCGTTTCCTGATGAACAATCAAGGTTCTTCGTCTCGTAATAGCTCTGGCTAA 1014 0.425 MITWNLFQARITSTHAILLSFLLHFLAKEAVVSENLVEYSTCDMGYLNSVLSPSSQVHAADDTPVSGGGLSQNGKFSYGYASSPGKRSSMEDFYETRIDGINGEVVGLFGVFDGHGGARAAEYVKQNLFSNLISHPKFISDTKSAIADAYTHTDSEFLKSENNQNRDAGSTASTAILVGDRLLVANVGDSRAVICRGGNAIAVSRDHKPDQTDERQRIEDAGGFVMWAGTWRVGGVLAVSRAFGDRLLKQYVVADPEIQEEKVDSSLEFLILASDGLWDVVSNEEAVAMIKPIEDAEEAAKRLMKEAYQRGSSDNITCVVVRFLMNNQGSSSRNSSG* 338
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr1g0306 337 ProSiteProfiles PPM-type phosphatase domain profile. 77 323 IPR001932 -
Mtr1g0306 337 ProSitePatterns PPM-type phosphatase domain signature. 108 116 IPR000222 GO:0043169
Mtr1g0306 337 SMART PP2C_SIG_2 93 323 IPR001932 -
Mtr1g0306 337 Gene3D - 69 328 IPR036457 -
Mtr1g0306 337 PANTHER PHYTOCHROME-ASSOCIATED PROTEIN PHOSPHATASE TYPE 2C 46 331 - -
Mtr1g0306 337 PANTHER ALPHABET, ISOFORM E-RELATED 46 331 - -
Mtr1g0306 337 Pfam Protein phosphatase 2C 105 316 IPR001932 -
Mtr1g0306 337 SMART PP2C_4 67 321 IPR001932 -
Mtr1g0306 337 CDD PP2Cc 76 323 IPR001932 -
Mtr1g0306 337 SUPERFAMILY PP2C-like 71 323 IPR036457 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr1g0306 Mtr-Chr1 3478812 3484386 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr1g0306 44 334 PP2C-type Phosphatase Gene Family AT4G31750 90.136 0.0 535
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr1g0306 K17506 - gmx:547661 579.711
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr1g0306 1 3478812 3484386 Mtr1g0306 1 3478812 3484386 ECH