Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Mtr1g0297 | ATGGCTATTAGAATGGATGAAAAGGTGGAAACTCTTGAATTAGAGTTACAACAAGTGAGAGAGGAGAACAATACTCTAAGATTCATGCTTGAAGTTATGAGTATAAAGTGTACAAAGCTTGAATCTCATCTTCAAGATATCAAAAAGGAAGAACATAGGGGAATCATAAGTTCAAATCATCAAATTGAGTCAATACCTAACATTGATTCAAGCAAAAGAGCAAGACTAGAGTTTCCCACAGCACAAAAGCCTCTACAAGTCTTTGTACGAACTCAACCTAATGATGAAAGTTTGATAATAAAAGATGGCTATCAATGGAGGAAGTATGGTCAAAAGGTTACCAAAGACAATGCTTCTCCTAGAGCTTACTTTAGGTGCTCCATGGCTCCTAGTTGCCCAGCAAAAAAGAAGGTGCAAAAATGCATACATGATAGGTCTATCCTTGTTGCAACATATGATGGAGAGCACAGCCATGGTGTCCCTAATGAGTCATTTAAACCATCTTCATCCACACCTAAAGGTTCATCAATATCTAATAAATTACCAACAAGATTAAGTGACAAAGAAGCCATAAGCACCAGAATTTGTGAGAATGTCATGCAACAGTTTGGCGTTGAAAGGCACATTAAAATTGAAGAATATGCAAGTTCCCTAATCAAAGATCCTGACTTCACTGCAGCATTAGCTGAAGCAGTTGCTCGAACCATCACTGATCAAGAACATAAGCGACAAGGTCTAGATCTCAATTTGAATCTTTCAGAAGAGTGA | 768 | 0.3763 | MAIRMDEKVETLELELQQVREENNTLRFMLEVMSIKCTKLESHLQDIKKEEHRGIISSNHQIESIPNIDSSKRARLEFPTAQKPLQVFVRTQPNDESLIIKDGYQWRKYGQKVTKDNASPRAYFRCSMAPSCPAKKKVQKCIHDRSILVATYDGEHSHGVPNESFKPSSSTPKGSSISNKLPTRLSDKEAISTRICENVMQQFGVERHIKIEEYASSLIKDPDFTAALAEAVARTITDQEHKRQGLDLNLNLSEE* | 256 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Mtr1g0297 | 255 | Coils | Coil | 2 | 29 | - | - | |
Mtr1g0297 | 255 | Pfam | WRKY DNA -binding domain | 101 | 158 | IPR003657 | GO:0003700|GO:0006355|GO:0043565 | |
Mtr1g0297 | 255 | SMART | WRKY_cls | 100 | 160 | IPR003657 | GO:0003700|GO:0006355|GO:0043565 | |
Mtr1g0297 | 255 | ProSiteProfiles | WRKY domain profile. | 95 | 161 | IPR003657 | GO:0003700|GO:0006355|GO:0043565 | |
Mtr1g0297 | 255 | PANTHER | WRKY TRANSCRIPTION FACTOR 36-RELATED | 5 | 236 | IPR044810 | GO:0003700 | |
Mtr1g0297 | 255 | MobiDBLite | consensus disorder prediction | 162 | 181 | - | - | |
Mtr1g0297 | 255 | Gene3D | WRKY domain | 86 | 162 | IPR036576 | GO:0003700|GO:0006355|GO:0043565 | |
Mtr1g0297 | 255 | PANTHER | WRKY TRANSCRIPTION FACTOR 49 | 5 | 236 | - | - | |
Mtr1g0297 | 255 | SUPERFAMILY | WRKY DNA-binding domain | 96 | 161 | IPR036576 | GO:0003700|GO:0006355|GO:0043565 | |
Mtr1g0297 | 255 | MobiDBLite | consensus disorder prediction | 158 | 181 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Mtr1g0297 | Mtr-Chr1 | 3315765 | 3317601 | Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Mtr1g0297 | 72 | 241 | WRKY Transcription Factor Family | AT1G80840 | 42.623 | 4.11e-45 | 152 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TF | WRKY | Mtr1g0297 | WRKY | 6e-22 | CL0274 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Mtr1g0297 | - | - | mtr:MTR_1g013790 | 495.352 |