Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr1g0296 ATGGCATTGTTCCGTAAGTTCTTCTATAAGAAACCCCCTGATGGGCTTCTTGAAATCACTGAAAGGGTTTATGTCTTCGATTACTGCTTTACCACGGATGTTATAGACGAAGACGAATACAAAGTGTATATAGGAGGAATAATTAGGCAAATTCGCGAGCACTTCCCCGACGCTTCATTTATGGTGTTCAACATGAGGGAAGGAGAAAACCAAAGCCATATATCAAACATTTTGTGTGACTATGACATGACCGTGATGGACTATCCTAGACAGTACGAAGGTTGTCCATTACTTACCATGGAGATGATCCATCATTTCTTAAGATCAGGTGAAAATTGGCTACAACTCGGGAATCAAAATATCGTTTTGATGCATTGCGAACGAGGTGGGTGGCCTGTCTTAGCATTTATGCTGGCAGCACTATTGATTTATAGAAAAATGTATACAGGGGAGCAGAAAACACTTGACATGATATATAAGCAAGCGCCTCGGGAACTTTTGCAGTTGATGTCACCGTTGAATCCATTACCTTCACAATTGAGGTATCTTCAATACATATCAAGAAGAAATGTTGGTTCGGAATGGCCTCCTCTGGATAGAGCACTTACATTGGACTGCGTAATTATAAGACAAATTCCTAATATGGATGGAGAGGGTGGTTGTCGTCCTATATTTAGGATATATGGACAGGACCCCTTTATTCCTGCAAATCGGAGTCCCAAAGTTCTCTTTTCTACTCCAAAAAGGAGCAAACTTGTTCGGCACTATAAACAGGCTGATTGTGAACTTGTTAAGATTGACATCCATTGTCATGTTCAAGGCGATGTTGTACTTGAGTGTATTAGTCTGGACAGTGATGTGGAACGAGAACAAATGATGTTCCGGGTGATGTTTAATACAGCATTCATAAGATCAAATATTTTGATGCTTAACCGCGATGAAATCGACATATTATGGAATACTAAAGATCACTTCCCTAAAAATTTCAGAGTAGAGGTTCTTTTCTCAGATATGGAGGCTTCTTCATCTTCTGTTATTTCAGTTGATCTTCCTCGTATTGAGGAGAAAGAAGGTCTACCTGTTGAAGCATTCGCTAAAGTTAAGGAAATTTTCAGCAATGTTGAGTGGCTCGATTCGAAGACAGATGTAGCAAATGTGCTCCAACAGATCACAGCATCGAATATGCTTCTAGAAAGATTGGACAGTGGAGCTTCTGCTTCAACAAGCACCTTGCTAAACGAGTCATTGTCCGGAAGATTAAAATTTGATTCAAAGTCACAAAGCCAAACAAACAGTCCCAAATCTTCTGTTCATGAGGAACGTTCCGTGTCTCCATTGCAATTGTCCGAGGATGTTCCTATGGATAAAATGATTAAACCAGTAAAAATAGAGGAACTGTCAGCAGAGAAAATCAAGACTCCTGCAAGTTTAGGTCCAGCGAGCGAACCTATTCCTTCATTTGTTCTGTCAAAAGATTCAGATTCTACTAAAAAGGAGTCTGAATCATCAGAACCAAAAAAGTCACTCGAAAATGATCCTGAATTTCCTGCTTCCACGGCTCAGGTAGAACAATCTATCCCCTTAATTGAACCATCAATAGATGCAGGTTCCACGAAAAAGAAGACTGGATCATTGGAATCTGAGAAAAAGAATATTGAATCATTAGCATCAAAGGCGGTATTGGAAAATGACACCATGTTTCCTGCATCTGAATCTAATATTAATGCAATTTCTATGAAAAATATTAGACTGTTAAGATCAAAAGAAAAGGAGATTGAATCATTATTCTCAGAGGCACTGTTGGAAAAGGATCACATAGTTAAATTTGAACCGAAGACGCTGCTGGAAGTTGATACAAATAGTCCGAGATCTGCAGGTCAAGAGAAATTTTCAGTGTCCTCATTTGAATCAATTGGGGATGCTGCAATGGAAAAGAAGAAAGAAGCTTTAGGTTTAACGGCATCACCAGAAAATAACATCAAGACTCCTGCACCAACAGATTCAAGTCCTACTGAAATGAAGATTGAATCATTAGAATCAAAGGCACCAGTGGAAAATGATACCAAGTTTCCCATGTGTCCAGCTCAAACGAAACAATCTATTCCTTTAATTGAACCATCCACAAAAGCTAATTCATTGGAAAAGATGGAGAAATTAGAGTCAAAGGAAAAGGATATTGAATTGTTAGAATCAAAGTCATTGTTGGAAAATGATACCAAGGGGGAGCAATCGGTTCCTCTAATTCAAACATCGAAGGATGCAAGTTCAATGAAAACGGTGACTGAGAAGTCAGAATCAACGGTGTTGTCAGAAACTGATATCAGGAGTCCAACATCCAAGGTTGATAATAAACAAATTAGTCCCTTAATTGAACCCTCCATTGATGCAAAATCAATTAAAAAGAAGATTGACCCTCAACAATTGCAGGTTTCACTTCAGCTACCAACCCAATCTATAATAATTTCTCCACGGATACATCAAGCTATTCGACCTGCTTCTGCTTCTTATTCTTCTACCTCCTTGCTAGGTTCGCCTGTAGCCATCTCAAGATATCAGGGTTCACCATCAGCTCTTGGAATAACAACTGTGTTGCAAGATCATACACCGATGGATATCAAAGAAGAAATCACTCATGCAGTGTCGATATCTCCTCCTTCAGACTCAAAGGCGCCAAAGTCTGTAGAGCCTTGTTCTACAAGTATTCCTACAACATCATCACTGGAATTGCTTCCATCTTCGCCGTTGAAGTCTTCAGACTCAAAGGAGCTAAATTCTGTAGAGCCTTGTTCTACAAGTATTCCTACAACATCTTCATCACCGGAATTGCTTCCATCTTCGCCATTGAAGTCTTCAGACTCACAGGGGCCAAAGTATGTAGAACTTTGTTCTACAAGTATTCCTACGACATCATCATCACCGGAATTGCTTCCATCTTCGCCATTGAAGTCTTCAGACTCAAAGGTGTCAAAGTCTGTAGAGCTTTGTTCTACAAGTATTCCTACAACATCATCATCATCGGAATTCCTTCCGTCTTCACCGCTGAAGTCTTCAGACTCAAAGGTGCCAAAGTCTGTAGAGCCTTGTTCTACAAGTATTCCTACAACATCATCACCACCGGAATTTCTTCCATCTTCGCCGTTGAAATCTTCAGACTCAAAGGCGCTAAAGTCTGCAGAGCTTTGTTCTACAAGTATTCCTGCAACATCTTCATCACCGGAATTGCTTCCATCTTCGCCGTTGAAGTTTTCAGACTCAAAGGCCTTAAAGTCTGTAGAGCCTTGTTCTACAAGTATTCCTACAACATCATCACCGCGGGAATTGCTTCCTTCTTCGCCGTTGAAGAGTTTAGACTCAAAGGCGCTAAAGTCTGCAGAGCCTTGTTCTACAAGTATTCCTACAACATTATCACCGGAATTGCTTCCTTCTTCGCCGTTGAAGTCTTCATCAGTGGATCCTCTTGCTGCCATTATTCCTATTCCTCCACCTCCTCCTCCTCAGCAAAGTGAAAATTCAATGCATGATACAAATCAGATATCATCGGCTATTCCTCCTCCCCCTCCCCCTCCATTCCTTCCTGAAACATCTTTTTCCACTGTAGAAGATTCATTAAAACATCCTCCCCCTCATCCACCGCCTCCACCACCACCACCTCCATCTTCAACCGGACAAACATCATCATCTTCAATACCTCCTCCTCCACTTCCTCCTCTACGGAGTATGAACAACTCTGTTGCTATGTCTGGTCCCCCTCCTCCACCTCCACCACCAGGCACCACACCTGGTTCCACTTCTACACCATTAGCGCCGCCACCACCTCCTCCGCCTGGTTTTGCAATCCAAAATTCTCTGTCTAATGGCCCTACAAATATTCCACCCGTACCCCCACCTCCTTCTCCTTCTGCCAATGGATTATCAAACTCTGCTGCCTCACCACAGTCTCGTGCAATTCCTGGACCACCTGGAACTGCACCTCCAATTCCTGGACCACCTGGGAATGTGCCTCCAATTCCTGGACCACCTTCCGGTGCATTTGGCGCAAAGGGACGCGGATTACTACGTACTAATGCGAAAACTCAAACTAAAAGAAGCAATCTGAAACCTTACCATTGGTTAAAGTTAACAAGGGCCATGCATGGTAGCTTGTGGGCCGAGACACAGAAACTTGATGAAGCTTCTAGGGCTCCAGAGTTTGACATGTCAGAACTTGAGACTCTTTTCTCTGCAAATAATCCAAGTTCTAGTCATGAAAAAGGAGGAAAATCAAATCGCCGTGGCTCGGGCCAGAAACCTGACAAAGTTCAACTAATTGAACTCAGGCGGGCGTATAACTGTGAGATTATGCTTACAAAAGTTAAAATCCCATTGCCTGATTTAATGGGTCATGTTCTCGCATTGGACGATTCCGTGTTGTATGTTGATCAGGTTGAGAACCTCATAAAGTTCTGTCCGACTAAAGAAGAGATGGACCAGCTCAAGGCATACACTGGAGATAAGGAAAATTTGGGGAAGTGTGAACAGTTCTTCTTAGAATTAATGAAAGTTCCAAGAGTGGAAAGCAAGCTAAGAGTTTTCTGTTTTAAGATGCAATTCTGCTCTCAGGTTTCAGAACTCAAAAGAGACTTGAATATCGTAAATTCTGCATCTGAAGAGATAAGGAATTCGGTCAAATTGAAAAGAATCATGCAGACCATTCTTTCTCTTGGCAATGCTTTGAATCATGGAACTGCAAGAGGTTCTGCTGTTGGGTTCCGTTTGGATAGTCTTCTTAAACTCACTGATACACGAGCCCGAAACAACAAAATGACCCTCATGCATTATCTTTGTAAGGTGCTTGCTGAAAAGCTTCCGGAACTTTTAGATTTCTCCAAAGACCTGGTCAATTTGGAGGGTGCAACCAAGATACAATTGAAATATTTGGCAGAAGAAATGCAAGCTATTAGTAAAGGACTGGAGAAAGTAATTCAAGAATTGTCGGCATCAGAGAATGATGGACCCGTGTCAGAAGTCTTCTGCCAGATTCTGAAAGAATTTCTTAGTGATGCTGAAGCTGAAGTGAGGTCTTTGGCTCAGCTTTATACCAATGTGGGTAGAAACGCGGATGCATTAGCATCATACTTCGGAGAAGACCCACAACGTTGCCCATTTGAACAAGTTGTAGCAACTCTGATGAACTTTGTGAGGATGTTCATCCGAGCACATGACGAAAATGTCAAGCAGATTGAATATGAAAAAAAGAAAGCAGACAAGGAAGCAGCAGAAAATGAAAAGTCGAAGCTAGCTAGAAATGAATCTGGACATATGATGAGGACCTCCATCAAGAGTGGTAATATTAAATAG 5337 0.4158 MALFRKFFYKKPPDGLLEITERVYVFDYCFTTDVIDEDEYKVYIGGIIRQIREHFPDASFMVFNMREGENQSHISNILCDYDMTVMDYPRQYEGCPLLTMEMIHHFLRSGENWLQLGNQNIVLMHCERGGWPVLAFMLAALLIYRKMYTGEQKTLDMIYKQAPRELLQLMSPLNPLPSQLRYLQYISRRNVGSEWPPLDRALTLDCVIIRQIPNMDGEGGCRPIFRIYGQDPFIPANRSPKVLFSTPKRSKLVRHYKQADCELVKIDIHCHVQGDVVLECISLDSDVEREQMMFRVMFNTAFIRSNILMLNRDEIDILWNTKDHFPKNFRVEVLFSDMEASSSSVISVDLPRIEEKEGLPVEAFAKVKEIFSNVEWLDSKTDVANVLQQITASNMLLERLDSGASASTSTLLNESLSGRLKFDSKSQSQTNSPKSSVHEERSVSPLQLSEDVPMDKMIKPVKIEELSAEKIKTPASLGPASEPIPSFVLSKDSDSTKKESESSEPKKSLENDPEFPASTAQVEQSIPLIEPSIDAGSTKKKTGSLESEKKNIESLASKAVLENDTMFPASESNINAISMKNIRLLRSKEKEIESLFSEALLEKDHIVKFEPKTLLEVDTNSPRSAGQEKFSVSSFESIGDAAMEKKKEALGLTASPENNIKTPAPTDSSPTEMKIESLESKAPVENDTKFPMCPAQTKQSIPLIEPSTKANSLEKMEKLESKEKDIELLESKSLLENDTKGEQSVPLIQTSKDASSMKTVTEKSESTVLSETDIRSPTSKVDNKQISPLIEPSIDAKSIKKKIDPQQLQVSLQLPTQSIIISPRIHQAIRPASASYSSTSLLGSPVAISRYQGSPSALGITTVLQDHTPMDIKEEITHAVSISPPSDSKAPKSVEPCSTSIPTTSSLELLPSSPLKSSDSKELNSVEPCSTSIPTTSSSPELLPSSPLKSSDSQGPKYVELCSTSIPTTSSSPELLPSSPLKSSDSKVSKSVELCSTSIPTTSSSSEFLPSSPLKSSDSKVPKSVEPCSTSIPTTSSPPEFLPSSPLKSSDSKALKSAELCSTSIPATSSSPELLPSSPLKFSDSKALKSVEPCSTSIPTTSSPRELLPSSPLKSLDSKALKSAEPCSTSIPTTLSPELLPSSPLKSSSVDPLAAIIPIPPPPPPQQSENSMHDTNQISSAIPPPPPPPFLPETSFSTVEDSLKHPPPHPPPPPPPPPSSTGQTSSSSIPPPPLPPLRSMNNSVAMSGPPPPPPPPGTTPGSTSTPLAPPPPPPPGFAIQNSLSNGPTNIPPVPPPPSPSANGLSNSAASPQSRAIPGPPGTAPPIPGPPGNVPPIPGPPSGAFGAKGRGLLRTNAKTQTKRSNLKPYHWLKLTRAMHGSLWAETQKLDEASRAPEFDMSELETLFSANNPSSSHEKGGKSNRRGSGQKPDKVQLIELRRAYNCEIMLTKVKIPLPDLMGHVLALDDSVLYVDQVENLIKFCPTKEEMDQLKAYTGDKENLGKCEQFFLELMKVPRVESKLRVFCFKMQFCSQVSELKRDLNIVNSASEEIRNSVKLKRIMQTILSLGNALNHGTARGSAVGFRLDSLLKLTDTRARNNKMTLMHYLCKVLAEKLPELLDFSKDLVNLEGATKIQLKYLAEEMQAISKGLEKVIQELSASENDGPVSEVFCQILKEFLSDAEAEVRSLAQLYTNVGRNADALASYFGEDPQRCPFEQVVATLMNFVRMFIRAHDENVKQIEYEKKKADKEAAENEKSKLARNESGHMMRTSIKSGNIK* 1779
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr1g0296 1778 Gene3D Protein tyrosine phosphatase superfamily 12 191 IPR029021 -
Mtr1g0296 1778 MobiDBLite consensus disorder prediction 1204 1221 - -
Mtr1g0296 1778 MobiDBLite consensus disorder prediction 1317 1341 - -
Mtr1g0296 1778 Pfam C2 domain of PTEN tumour-suppressor protein 200 336 IPR014020 -
Mtr1g0296 1778 ProSiteProfiles Formin homology-2 (FH2) domain profile. 1355 1755 IPR015425 -
Mtr1g0296 1778 PANTHER FORMIN-J 1 688 - -
Mtr1g0296 1778 PANTHER FORMIN-J 1206 1770 - -
Mtr1g0296 1778 MobiDBLite consensus disorder prediction 421 455 - -
Mtr1g0296 1778 MobiDBLite consensus disorder prediction 1122 1149 - -
Mtr1g0296 1778 MobiDBLite consensus disorder prediction 1406 1432 - -
Mtr1g0296 1778 Pfam Formin Homology 2 Domain 1357 1729 IPR015425 -
Mtr1g0296 1778 MobiDBLite consensus disorder prediction 474 524 - -
Mtr1g0296 1778 SMART it6_source 1103 1774 IPR015425 -
Mtr1g0296 1778 Gene3D Formin, FH2 domain 1374 1767 IPR042201 -
Mtr1g0296 1778 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 12 187 IPR029021 -
Mtr1g0296 1778 ProSiteProfiles C2 tensin-type domain profile. 199 338 IPR014020 -
Mtr1g0296 1778 MobiDBLite consensus disorder prediction 881 1050 - -
Mtr1g0296 1778 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 201 338 IPR035892 -
Mtr1g0296 1778 MobiDBLite consensus disorder prediction 650 700 - -
Mtr1g0296 1778 MobiDBLite consensus disorder prediction 1089 1109 - -
Mtr1g0296 1778 MobiDBLite consensus disorder prediction 752 781 - -
Mtr1g0296 1778 SUPERFAMILY Formin homology 2 domain (FH2 domain) 1430 1756 - -
Mtr1g0296 1778 MobiDBLite consensus disorder prediction 655 675 - -
Mtr1g0296 1778 Coils Coil 712 732 - -
Mtr1g0296 1778 Coils Coil 1730 1762 - -
Mtr1g0296 1778 MobiDBLite consensus disorder prediction 1064 1078 - -
Mtr1g0296 1778 MobiDBLite consensus disorder prediction 1246 1278 - -
Mtr1g0296 1778 MobiDBLite consensus disorder prediction 492 511 - -
Mtr1g0296 1778 MobiDBLite consensus disorder prediction 1064 1348 - -
Mtr1g0296 1778 SMART PTEN_C2_2 197 337 IPR014020 -
Mtr1g0296 1778 MobiDBLite consensus disorder prediction 1746 1763 - -
Mtr1g0296 1778 Gene3D - 196 341 - -
Mtr1g0296 1778 MobiDBLite consensus disorder prediction 421 443 - -
Mtr1g0296 1778 MobiDBLite consensus disorder prediction 1746 1778 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr1g0296 Mtr-Chr1 3304188 3315512 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr1g0296 755 867 FH2 protein (formin) Gene Family AT2G25050 36.752 1.88e-07 54.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr1g0296 - - cam:101501499 1323.53