Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr1g0289 ATGGCAGGGAGGCATTGTTACAAGGATGTGCTCCCATTCACGGCAATGGTTGCAATAGAGTGCACAAACGTTGGTGTCAGTGTTCTATTCAAAGCAGCTACTCAAAAAGGGTTGAGTTACTATGTCTTCATTGCCTATTCATTTGTTGTCTCCACTCTTGTTCTCCTTTTGCCTCTCCCCTTCTTTATCAAATGGTCAAGAGGGCTTCCTCCTTTGAACATGTCTCTAATCTTCAGAATTTTTCTCCTTGGAGTTTTGGGAGTTGTAGCTCAGCTTTTTGGATATAAAGGACTTGAATACACAACACCTACTCTTGCTTCATCTCTTTCCAACCTTATACCTGCTTTTACATTCATCCTAGCTATCATTTTCAGGATGGAGAAGGTAAAATTAAGGTGGAAAAGCAGTCAAGCAAAAATCCTGGGTTCTACGGTATCAATATTAGGTGCTCTCACAGTTGTTCTTTATAAGGGTCCAATAATCATACCCTCACCATCAACACAATCACCACCTATTATTCATTCTCCAATCACTTCTTCAACAACAGAATCAAATTGGATTCTTGGTGGATCTCTACTTGTTATTGAGTTTCTTATTGTTCCAATATGGTACATTATTCAGACTACAGTCATAAAAGAATATCCAGCAGAGATTATTGTGGTATTTTTATACAACTTATGTGGAGTACTAGTATCTATACCAATATGCTTACTACTAGAACCAAACTTGAGTGCTTGGAAGATAAATCCTGATATAACAATGATCTCCATCATATGCTCGGGATTCTTTTCTACAGGACTAAGTTGTTTGGTTCATACTTGGGGACTCCATATTAAAGGCCCTGTGTATATATCACTCTTTAAGCCTTTGTCAATAGCTATTGCTGCATCTTTTAGTGCTATATTTCTTGGTGATGCACTGCATTTTGGAACTGTTGTTGGAGCAGTAATAATATCGATAGGATTTTATGCTGTTTTATGGGGGAAATCCAAAGAAGAATCGAATGATGAGTTTGACATAGGTAGAGTTCCACTTCCATCAAATAGCAAGACTCCTTTGTTGAAGGTCTCAAATGTGATAGAGTAG 1086 0.3794 MAGRHCYKDVLPFTAMVAIECTNVGVSVLFKAATQKGLSYYVFIAYSFVVSTLVLLLPLPFFIKWSRGLPPLNMSLIFRIFLLGVLGVVAQLFGYKGLEYTTPTLASSLSNLIPAFTFILAIIFRMEKVKLRWKSSQAKILGSTVSILGALTVVLYKGPIIIPSPSTQSPPIIHSPITSSTTESNWILGGSLLVIEFLIVPIWYIIQTTVIKEYPAEIIVVFLYNLCGVLVSIPICLLLEPNLSAWKINPDITMISIICSGFFSTGLSCLVHTWGLHIKGPVYISLFKPLSIAIAASFSAIFLGDALHFGTVVGAVIISIGFYAVLWGKSKEESNDEFDIGRVPLPSNSKTPLLKVSNVIE* 362
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr1g0289 361 SUPERFAMILY Multidrug resistance efflux transporter EmrE 226 331 - -
Mtr1g0289 361 PANTHER WAT1-RELATED PROTEIN 10 334 IPR030184 GO:0016021|GO:0022857
Mtr1g0289 361 SUPERFAMILY Multidrug resistance efflux transporter EmrE 47 156 - -
Mtr1g0289 361 Pfam EamA-like transporter family 193 326 IPR000620 GO:0016020|GO:0016021
Mtr1g0289 361 Pfam EamA-like transporter family 25 154 IPR000620 GO:0016020|GO:0016021
Mtr1g0289 361 PANTHER WAT1-RELATED PROTEIN 10 334 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr1g0289 Mtr-Chr1 3169628 3172549 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr1g0289 1 361 Nodulin-like Gene Family AT5G40240 52.473 5.89e-130 375
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr1g0289 - - mtr:MTR_1g014510 656.366