Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr1g0287 ATGGCTGGTTCATCTTCTTGTTCTCTTTTGGTTCTTTTTGTTCTGTTTGGTTGTGCTTTTGCAGCTAAGGATATCTTGCTTGGTGGCAAAACTGATGCATGGAAGGTTCCTTCTTCGGAATCTGATTCTCTCAACAAATGGGCTTCAAGTGTTCGTTTTCAAGTTGGAGACCATCTAATTTTGAAATATGAAGCTGGAAAAGACTCTGTTTTGCAAGTGAGTAAGGAAGATTATGATAGCTGCAACATCTCAAAACCCATCAAACATTACAATGATGGGAACACAAAAGTGAGATTTGATCATTCTGGTCCATACTACTACATCAGTGGAGAAAAGGGTCACTGTGAGAAGGGTCAGAAGCTTACTGTTGTTGTAATGAGTCTAAAAGGGGGAAGTAGGCCCATTGTTGCTTTTTCACCATCACCTTCACCAGCTGAGGTTGAAGGTCCAGCTGCCTCTGCTGTTGCTCCAGCTCCAACAAGTGGTGCTGCTGTTTTGCAAGGTGGTGGTGTTTTTGTGGCTGTAGGAGTGTTTGTTGCCATGTGGCTTTTCTGA 555 0.4288 MAGSSSCSLLVLFVLFGCAFAAKDILLGGKTDAWKVPSSESDSLNKWASSVRFQVGDHLILKYEAGKDSVLQVSKEDYDSCNISKPIKHYNDGNTKVRFDHSGPYYYISGEKGHCEKGQKLTVVVMSLKGGSRPIVAFSPSPSPAEVEGPAASAVAPAPTSGAAVLQGGGVFVAVGVFVAMWLF* 185
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr1g0287 184 Gene3D - 22 130 IPR008972 -
Mtr1g0287 184 PANTHER EARLY NODULIN-LIKE PROTEIN 3 7 178 - -
Mtr1g0287 184 PANTHER BLUE COPPER PROTEIN 7 178 IPR039391 GO:0009055
Mtr1g0287 184 Pfam Plastocyanin-like domain 34 119 IPR003245 GO:0009055
Mtr1g0287 184 CDD OsENODL1_like 23 126 IPR041846 -
Mtr1g0287 184 ProSiteProfiles Phytocyanin domain profile. 23 127 IPR003245 GO:0009055
Mtr1g0287 184 SUPERFAMILY Cupredoxins 22 126 IPR008972 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr1g0287 Mtr-Chr1 3160496 3161706 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr1g0287 9 184 Phytocyanin Superfamily AT4G31840 48.864 3.90e-57 176
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr1g0287 - - gmx:100527857 196.438
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr1g0287 1 3160496 3161706 Mtr1g0287 1 3160496 3161706 ECH