Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr1g0282 ATGGGAACAACTCTCAGCATTCCTAAAACTGAAAAGTTCTCAGAAGATGGTGAAAATGACAATCTTAGATATGGTTTATCATCTATGCAAGGTTGGCGTGCAACAATGGAAGATGCACATGCGGCGCATCTTGATGTGGATTCATCCACTTCGTTTTTCGGTGTATATGATGGTCATGGAGGTAAGGCGGTTGCAAAGTTTTGTGCCAAGCACCTTCACCAACAGGTGCTCAAGAGTGAAGAATACATAGCTGGAGATGTTGGAACATCTCTTACGAAAGCATTTTTGAGAATGGATGAGATGATGCGTGGTCAAAGGGGATGGAGGGAATTAGCAGTCTTAGGTGATAAGGTAAAAGGGTTCAATGGAATAATTGAAGGATTGATTCGGTCTCCAAGAAGCAATGATAATAAGGACCAAAGTGATGATTGGGCCTTTGAGAAGGGGCCTCATTCAGACTTTGATGGACCAAATTCAGGAAGCACTGCTTGTGTTGCAATCATTAGAAACAACCTACTTTTTGTTGCGAATGCTGGTGATTCACGCTGCGTAATATCTAGGAATGGTCAGGCATACAATTTATCTAGAGATCACAAACCTGAGCTTGTGATTGAGAAGGAAAGAATCTATAAAGCTGGTGGTTTTATTCATGCAGGACGAATTAATGGGAGTTTAAATCTTGCAAGAGCTATAGGTGACGTGGACTTCAAAAATAATAGATTTCTTTCTGCTGAAAAACAAGTTGTGACCGCCAATCCAGACATAAACATTGTCGACCTTCACGACGAAGATGAGTTTATAGTGATAGCTTGTGATGGCATATGGGATTGCCTATCAAGCCAACAATTGGTAGATTTTGTACGTCAAGAACTTCTCTTGGAAACCAAACTCTCTGAGGTTTGTGAAAGAGTGCTAGACCGGTGTTTAGCGCCATCTTTGGCTGTTGGTGATGGATGCGATAACATGACAATGATCTTGGTGCAGTTCAAAAAACCGCTACAAACCAGTGCACCAGCTCAAGAACAATCATCTTCAAATGAACAAGATGCATCTGAACCAACTTTGGAGAACAGTTGA 1077 0.4141 MGTTLSIPKTEKFSEDGENDNLRYGLSSMQGWRATMEDAHAAHLDVDSSTSFFGVYDGHGGKAVAKFCAKHLHQQVLKSEEYIAGDVGTSLTKAFLRMDEMMRGQRGWRELAVLGDKVKGFNGIIEGLIRSPRSNDNKDQSDDWAFEKGPHSDFDGPNSGSTACVAIIRNNLLFVANAGDSRCVISRNGQAYNLSRDHKPELVIEKERIYKAGGFIHAGRINGSLNLARAIGDVDFKNNRFLSAEKQVVTANPDINIVDLHDEDEFIVIACDGIWDCLSSQQLVDFVRQELLLETKLSEVCERVLDRCLAPSLAVGDGCDNMTMILVQFKKPLQTSAPAQEQSSSNEQDASEPTLENS* 359
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr1g0282 358 ProSitePatterns PPM-type phosphatase domain signature. 52 60 IPR000222 GO:0043169
Mtr1g0282 358 Pfam Protein phosphatase 2C 142 311 IPR001932 -
Mtr1g0282 358 Pfam Protein phosphatase 2C 23 104 IPR001932 -
Mtr1g0282 358 CDD PP2Cc 23 329 IPR001932 -
Mtr1g0282 358 SUPERFAMILY PP2C-like 3 330 IPR036457 -
Mtr1g0282 358 SMART PP2C_4 13 327 IPR001932 -
Mtr1g0282 358 PANTHER PROTEIN PHOSPHATASE 2C 1 341 IPR015655 GO:0004722|GO:0006470
Mtr1g0282 358 PANTHER PROTEIN PHOSPHATASE 2C 60 ISOFORM X1-RELATED 1 341 - -
Mtr1g0282 358 MobiDBLite consensus disorder prediction 132 157 - -
Mtr1g0282 358 SMART PP2C_SIG_2 28 329 IPR001932 -
Mtr1g0282 358 MobiDBLite consensus disorder prediction 132 150 - -
Mtr1g0282 358 Gene3D - 1 330 IPR036457 -
Mtr1g0282 358 ProSiteProfiles PPM-type phosphatase domain profile. 23 329 IPR001932 -
Mtr1g0282 358 MobiDBLite consensus disorder prediction 335 358 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr1g0282 Mtr-Chr1 3124141 3128933 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr1g0282 1 332 PP2C-type Phosphatase Gene Family AT2G25070 74.096 0.0 533
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr1g0282 K17499 - gmx:100793667 574.318