Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr1g0278 ATGTTGAATTCTCCTTCATCTTGTTCCTCAAACATCATTAATCAGTCCAAAAATATCCTTGTTCTTTTTTCACTACTCCTTGTTCTCTCTTACCTTCCAAAAACAAACTCACTTTTGTTCAACATAACAAACTTTGATGATCCAACAGTTGCATCAAACATGTCATACCAAGGTGATGGAAAATCCACCAATGGTTCCATTGATCTCAACAAAGTAAGTTACCTTTTCCGTGTAGGAAGAGCATTCTATTCACAACCTTTACATTTATGGGACAAAAAAACCAACACTCTCACAAGTTTCACCACACGTTTTTCTTTTACAATTGATAAACTAAATGACACTACATACGGTGATGGTTTTGTGTTTTACTTGGCACCTTTAGGTTATCAAATACCACCTAATTCAGCTGGTGGTGTTTATGGTCTTTTTAATGCTACTACTAATAGTAACTTTGTTATGAACTATGTTGTTGGTGTTGAGTTTGATACTTTTGTTGGTCCCACTGATCCACCAATGAAACATGTTGGTATTGATGATAATGCTTTGACTTCTGTTGCTTTTGGGAAATTTGATATTGATAAGAATCTTGGTAGGGTATGTTATGTTTTGATTGATTATAATTCTGATGAGAAGATGTTGGAAGTTTTTTGGTCTTTTAAGGGAAGGTTTGTGAAAGGTGATGGAAGTTATGGGAATTCTTCAATTTCTTATCAAATTGATCTTATGAAGAAGTTGCCTGAATTTGTTAATATTGGATTTTCGGCTTCAACAGGTCTTTCTACCGAAAGTAATGTTATTCATTCGTGGGAGTTCAGTTCGAATCTGGAGGATTCAAACTCTACCACGAGTTTGGTGGAGGGAAATGATGGAAAAGGGTCGTTGAAAACGGTTATTGTTGTCGTTGCTGTGATTGTTCCGGTTATTTTGGTATTTTTGATAGCCAGTATTGTTGGTTGGGTGATAGTGAAGAGGAAAAGGAAGAATTGTGATGAAGGGCTTGATGAATATGGTATACCATTTCCGAAGAAATTTGATTTGGATAAAGCAACAATACCTAGAAGATTTGAATATAGTGAATTAGTTGCAGCTACTAATGGTTTTGATGATGATAGAATGCTTGGAAGAGGAGGATATGGACAAGTTTACAAAGGTGCTTTGAGTTATTTAGGAAAGATTGTTGCTGTGAAGAGGATTTTTGCCGATTTTGAGAATTCAGAAAGAGTTTTCATCAATGAGGTTAGGATTATAAGCCGTTTGATACATAGAAACTTGGTTCAATTTATTGGTTGGTGTCATGAACAAGATGAGTTACTTTTGGTTTTTGAGTACATGCCTAATGGAAGCCTTGACACACATTTGTTTGGTGACAAGAAAAGTTTGGCTTGGGAAGTAAGGTACAAGGTTGCATTAGGTGTCGCGAACGCGCTTCGTTACCTTCATGACGATGCTGAGCAATGTGTTCTTCATCGGGATATTAAGTCAGCTAATGTGTTGCTGGACACTGATTTCAGCACAAAACTCGGTGATTTCGGGATGGCGAAACTAGTTGATCCAATGTTGAGGACTCAAAGAACAGATGTAGTCGGAACATATGGTTATTTAGCACCTGAATATATCAATGGAGGAAGGGCTAGTAAAGAATCTGACATGTATAGTTTTGGAATTGTTGCTTTGGAGCTAGCAACTGGGAGAAGGTTTTTTCAAGATGGTGACTTTCATGTTCCTTTGATGAATTGGGTTTGGGGACTTTATGTGGAAGGAAATCTTATGTGTGCTGCTGATGAAAAATTGAATATGGAGTTTGATGTTAGTGAAATGAAGAGTTTGCTTATTGTAGGGTTATGGTGTACTCATTCAAATGATAAAGAAAGACCTAAGGCTTATGAAGTAATTAAGGTTCTTCAACTTGAAATGGCATTACCTGAACTTCCACTTGATATGCATGATCGTGCTCCTCCTATTGTACCTTTTAGGCAATCCAATGGTCCCTCAATGGCACCACCTATGACTAACAGTCTTATTACTTCTGGAAGATAG 2037 0.3687 MLNSPSSCSSNIINQSKNILVLFSLLLVLSYLPKTNSLLFNITNFDDPTVASNMSYQGDGKSTNGSIDLNKVSYLFRVGRAFYSQPLHLWDKKTNTLTSFTTRFSFTIDKLNDTTYGDGFVFYLAPLGYQIPPNSAGGVYGLFNATTNSNFVMNYVVGVEFDTFVGPTDPPMKHVGIDDNALTSVAFGKFDIDKNLGRVCYVLIDYNSDEKMLEVFWSFKGRFVKGDGSYGNSSISYQIDLMKKLPEFVNIGFSASTGLSTESNVIHSWEFSSNLEDSNSTTSLVEGNDGKGSLKTVIVVVAVIVPVILVFLIASIVGWVIVKRKRKNCDEGLDEYGIPFPKKFDLDKATIPRRFEYSELVAATNGFDDDRMLGRGGYGQVYKGALSYLGKIVAVKRIFADFENSERVFINEVRIISRLIHRNLVQFIGWCHEQDELLLVFEYMPNGSLDTHLFGDKKSLAWEVRYKVALGVANALRYLHDDAEQCVLHRDIKSANVLLDTDFSTKLGDFGMAKLVDPMLRTQRTDVVGTYGYLAPEYINGGRASKESDMYSFGIVALELATGRRFFQDGDFHVPLMNWVWGLYVEGNLMCAADEKLNMEFDVSEMKSLLIVGLWCTHSNDKERPKAYEVIKVLQLEMALPELPLDMHDRAPPIVPFRQSNGPSMAPPMTNSLITSGR* 679
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr1g0278 678 CDD STKc_IRAK 373 635 - -
Mtr1g0278 678 ProSiteProfiles Protein kinase domain profile. 367 640 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr1g0278 678 SUPERFAMILY Concanavalin A-like lectins/glucanases 38 276 IPR013320 -
Mtr1g0278 678 Gene3D Phosphorylase Kinase; domain 1 352 443 - -
Mtr1g0278 678 ProSitePatterns Serine/Threonine protein kinases active-site signature. 487 499 IPR008271 GO:0004672|GO:0006468
Mtr1g0278 678 CDD lectin_legume_LecRK_Arcelin_ConA 40 275 IPR001220 GO:0030246
Mtr1g0278 678 PANTHER - 39 648 - -
Mtr1g0278 678 Pfam Legume lectin domain 38 280 IPR001220 GO:0030246
Mtr1g0278 678 ProSitePatterns Protein kinases ATP-binding region signature. 373 396 IPR017441 GO:0005524
Mtr1g0278 678 ProSitePatterns Legume lectins beta-chain signature. 157 163 IPR019825 -
Mtr1g0278 678 Gene3D - 35 286 - -
Mtr1g0278 678 PANTHER LECTIN RECEPTOR KINASE 39 648 - -
Mtr1g0278 678 MobiDBLite consensus disorder prediction 656 678 - -
Mtr1g0278 678 SUPERFAMILY Protein kinase-like (PK-like) 351 648 IPR011009 -
Mtr1g0278 678 SMART serkin_6 367 639 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr1g0278 678 ProSitePatterns Legume lectins alpha-chain signature. 245 254 IPR000985 -
Mtr1g0278 678 Gene3D Transferase(Phosphotransferase) domain 1 444 650 - -
Mtr1g0278 678 Pfam Protein kinase domain 368 631 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr1g0278 678 MobiDBLite consensus disorder prediction 663 678 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr1g0278 Mtr-Chr1 3100248 3102595 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr1g0278 18 647 Receptor kinase-like Gene Family AT5G10530 45.312 1.93e-179 524
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_L-LEC Mtr1g0278 Pkinase 3.6e-51 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr1g0278 - - gmx:100791220 879.011