Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr1g0265 ATGACGGAGCTTGATGTTGATTCTAGGCCGGAAACATTTTCACAACCAATAAATGTTGCCGGAATGGATGAGGTTCAAGGGGAATGGGAGTTGGATGATCTTGTTAATGATTTGCACAAAGAATGGAGTCAACATGAAGGGAAGAAGGCAGTGTCACAAAAATATGTTGAATTTATGTTGAACAACAAAGCTAGTGAGGACAATCAAAAGAAGCACGCTGATAGGGTGAAGGATAGTAATAATCCGGGTCCTTGGAGCATTGATTGGCTTGCAAACCAGCAGTCTATAGCGGATGGTGGTATTGTTTTCACATCCTCGCACAATAATGGCAAGAGCGGAGATTTTAAGGCTGAAGCTGTTTACGGTCAGATGAATGATCAGTTTCCTATAGGAATGCGAGTTCTTGCGGTTGATGATGATAGAACATGTCTCAAGATTTTGGAGAAACTTCTCCAAAGGTGTCAATACCATGTAACCACTGCTCAAAACGCGATAACGGCGTTGAACCTGTTGAGAGAAAACAAAAGCAATTTTGACCTAGTAATCAGCAATGTTCATATGCCAGACATGGACGGATTTAAGCTTCTTGAGCTTGTTGGACTTGAGATGGACCTACCTGTCATCATGTTTTCTGCGAATGATGATCCGAAGATGGTGATGAAAGGAATTGAACACGGTGCTTGTGATTATCTGCTGAAACCTGTTAGACTGAAAGAGGTACAGATCATTTGGCAGCATGTAATCAGGAAGAAGAAAACTCGAACTGTTTGGTCCGCTGATTTACACCGCAAGTTTGTTGTTGCGGTTAATCAATTAGGCGTTGACAAGGCTGTACCCAAAAAGATTCTTGAACTGATGAATGTTGAAAATCTGACAAGGGAAAAGGTGGCCAGCCATCTCCAGAAGTATAGACTCTATCTAAAAAGAATTAGTTGTGCGGAAGACAAACAAGATCATATGGCAGCAGCCTTAGCTAGTAGTTCAGATGCATCCTATTTAAGAAGTGGAGTTGGAGGACATTTGCATACATTGAATGGCTCTACACAGTTTCATAACCATTATAATCCTTTCAGATCATTTCCATCTGGTGGAGGTATGATTAGTAGTTTCAACACGCCTAATAACGTGAATATGCATGGATTGCCTTCTTCTGGAACTCTTCAGCCGATTCAGACACATAATTTAAACAACTCAACAGATGATCAGCTAAAGTTCCAATCGGCCCTAACTCGCGGCAATCCAAATGATGTTCAAAGAGATATCTCTATTAGTCCTATCCAAAACATGACCAATAACCTCCCAAATTTCAGTTTCACAAACAATCCCTTGATGTTAGAAGGAAATCCTCAAGAAAAACAAATAGGTGAAGGATACAAAAATTTAGCATCTCAGAATTCACAGTATTTCTCTTTACTTGAAAACAGAAGGTGCAATCGTATTTGGTCAAGCACAATGCAACTACCTGGAACAAGCTCTTATCTTCCAAGAGAATCTTTTAACCATGCTGCTATGCCTCATCTGTCATTTCAAGGTTGGGATAATAACAATAATCATGATGGAAGTCACCATTCTTCTAATGTGATCGGCAATTCAATAGGCTCTTCTATGATTCCTGGTATGAATGTTGTTGAACAAGAAGGAAACTTGGACTACAATTATGGTGATTCGGTACAATGA 1677 0.3995 MTELDVDSRPETFSQPINVAGMDEVQGEWELDDLVNDLHKEWSQHEGKKAVSQKYVEFMLNNKASEDNQKKHADRVKDSNNPGPWSIDWLANQQSIADGGIVFTSSHNNGKSGDFKAEAVYGQMNDQFPIGMRVLAVDDDRTCLKILEKLLQRCQYHVTTAQNAITALNLLRENKSNFDLVISNVHMPDMDGFKLLELVGLEMDLPVIMFSANDDPKMVMKGIEHGACDYLLKPVRLKEVQIIWQHVIRKKKTRTVWSADLHRKFVVAVNQLGVDKAVPKKILELMNVENLTREKVASHLQKYRLYLKRISCAEDKQDHMAAALASSSDASYLRSGVGGHLHTLNGSTQFHNHYNPFRSFPSGGGMISSFNTPNNVNMHGLPSSGTLQPIQTHNLNNSTDDQLKFQSALTRGNPNDVQRDISISPIQNMTNNLPNFSFTNNPLMLEGNPQEKQIGEGYKNLASQNSQYFSLLENRRCNRIWSSTMQLPGTSSYLPRESFNHAAMPHLSFQGWDNNNNHDGSHHSSNVIGNSIGSSMIPGMNVVEQEGNLDYNYGDSVQ* 559
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr1g0265 558 Pfam Response regulator receiver domain 134 240 IPR001789 GO:0000160
Mtr1g0265 558 Pfam Myb-like DNA-binding domain 255 304 IPR001005 -
Mtr1g0265 558 SUPERFAMILY Homeodomain-like 250 309 IPR009057 -
Mtr1g0265 558 Gene3D - 129 252 - -
Mtr1g0265 558 PANTHER TWO-COMPONENT RESPONSE REGULATOR 251 551 IPR045279 GO:0009736
Mtr1g0265 558 PANTHER TWO-COMPONENT RESPONSE REGULATOR 124 253 IPR045279 GO:0009736
Mtr1g0265 558 ProSiteProfiles Response regulatory domain profile. 133 248 IPR001789 GO:0000160
Mtr1g0265 558 CDD REC_typeB_ARR-like 134 248 - -
Mtr1g0265 558 Gene3D - 253 311 - -
Mtr1g0265 558 SMART REC_2 132 244 IPR001789 GO:0000160
Mtr1g0265 558 SUPERFAMILY CheY-like 131 254 IPR011006 -
Mtr1g0265 558 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 249 308 IPR017930 -
Mtr1g0265 558 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 252 305 IPR006447 GO:0003677
Mtr1g0265 558 PANTHER TWO-COMPONENT RESPONSE REGULATOR 251 551 - -
Mtr1g0265 558 PANTHER TWO-COMPONENT RESPONSE REGULATOR 124 253 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr1g0265 Mtr-Chr1 2931053 2935168 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr1g0265 126 454 Response Regulator Gene Family AT4G31920 44.020 1.02e-92 293
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-ARR-B Mtr1g0265 Response_reg 1.3e-22 CL0304
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr1g0265 - K14491 mtr:MTR_1g013170 612.838