Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr1g0255 ATGTTCCATCTATCTTCACATGTTTTCATAGAAACAATGAAAATGAAGCTTCTTTTTATGTTCTTCCTTATTCCTCACAAACCCATTTGGATTCTTGCCTCTATAGTACACCCTCTTGTTCCCTCTCCTCAAATTTCACCAATTCTTACATCAATCGCTGTATCTGCTTCCTCTCCAGATATTCATGTGGGGGATGAACATCAAAATATGGATTCACACAAGAAAAAGGTAATGGCTTTTGTGGCAGCTAGCACTGGACTTGGTGCTATCATTTTGTGTTTGTTAAGCTTCTGGATTTTTTACATCAAGTATTCTTCAAAATCCAAAAAGAAAAACCTTCAAAACTCAGATGGTGAAAAAGGGCTTGGTTTAGTTCCATTTTTGAGTAAATTCAGTTCTGTGAAGATGGTTGGTAAGAAAGGGTGTGTTCCAATCATTGACTATAAGCAATTAGAAAAAGCCACTGGAAATTTCAAGGAAAGTAACATCATAGGTGAGGGTGGTTTTGGATGTGTTTACAAGGCTAGGTTGGATGATAATTTAGATGTTGCCATCAAGAAGTTGAACTGTGAATGTCAATATGCTGAGAGAGAATTTGAGAATGAGGTGGATTTGTTAAGTAAAATTCAACATCCAAATGTAATTTCTCTACTGGGCTGTAGCAGTAATGAGGATTCAAGGTTTATTGTCTATGAGTTGATGCAAAATGGATCATTGGAAACTCAATTACATGGACCATCTCATGGCTCAGCATTGACTTGGCATATGAGGATGAAGATTGCTCTTGACACAGCTAGAGGTTTAAAATATCTGCATGAGCACTGCTACCCTGCAGTGATCCATAGAGATCTGAAATCTTCTAATATTCTTTTAGATGCAAACTTCAATGCCAAGCTTTCTGATTTTGGTCTTGCAATAACTGATGGGTCCCAAAACAAGAATAACATCAAGCTTTCAGGCACATTGGGGTATGTTGCCCCGGAGTATCTTTTAGATGGTAAATTGACAGATAAAAGTGATGTGTATGCTTTTGGAGTTGTGCTTCTTGAGCTTCTATTAGGAAGAAAGCCTGTGGAAAAACTTACACCATCTCAATGCCAGTCTATTGTCACATGGGCCATGCCACAGCTCACAGACAGATCCAAGCTTCCAAACATTGTGGATAATGTGATTAAGAATACAATGGATCCTAAGCACTTATACCAGGTTGCTGCTGTGGCTGTATTATGTGTGCAGCCAGAGCCGTGTTACCGCCCTTTGATTGCAGATGTTCTACACTCCCTCATCCCTCTTGTACCTGTTGAGCTTGGAGGAACACTCAGAGTTTCACAAGTGACGCAGCAACCTAAGAATTCTAGTTAA 1362 0.3913 MFHLSSHVFIETMKMKLLFMFFLIPHKPIWILASIVHPLVPSPQISPILTSIAVSASSPDIHVGDEHQNMDSHKKKVMAFVAASTGLGAIILCLLSFWIFYIKYSSKSKKKNLQNSDGEKGLGLVPFLSKFSSVKMVGKKGCVPIIDYKQLEKATGNFKESNIIGEGGFGCVYKARLDDNLDVAIKKLNCECQYAEREFENEVDLLSKIQHPNVISLLGCSSNEDSRFIVYELMQNGSLETQLHGPSHGSALTWHMRMKIALDTARGLKYLHEHCYPAVIHRDLKSSNILLDANFNAKLSDFGLAITDGSQNKNNIKLSGTLGYVAPEYLLDGKLTDKSDVYAFGVVLLELLLGRKPVEKLTPSQCQSIVTWAMPQLTDRSKLPNIVDNVIKNTMDPKHLYQVAAVAVLCVQPEPCYRPLIADVLHSLIPLVPVELGGTLRVSQVTQQPKNSS* 454
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr1g0255 453 PANTHER BNAA04G14780D PROTEIN 53 449 - -
Mtr1g0255 453 SMART serkin_6 158 429 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr1g0255 453 ProSitePatterns Protein kinases ATP-binding region signature. 164 187 IPR017441 GO:0005524
Mtr1g0255 453 PANTHER OS01G0750732 PROTEIN 53 449 - -
Mtr1g0255 453 Gene3D Transferase(Phosphotransferase) domain 1 234 433 - -
Mtr1g0255 453 Pfam Protein tyrosine and serine/threonine kinase 161 396 IPR001245 GO:0004672|GO:0006468
Mtr1g0255 453 SUPERFAMILY Protein kinase-like (PK-like) 139 428 IPR011009 -
Mtr1g0255 453 ProSiteProfiles Protein kinase domain profile. 158 429 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr1g0255 453 CDD STKc_IRAK 164 431 - -
Mtr1g0255 453 Gene3D Phosphorylase Kinase; domain 1 128 233 - -
Mtr1g0255 453 ProSitePatterns Serine/Threonine protein kinases active-site signature. 279 291 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr1g0255 Mtr-Chr1 2845784 2850312 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr1g0255 28 374 Receptor kinase-like Gene Family AT1G80640 45.580 8.48e-97 293
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-X Mtr1g0255 Pkinase 6.9e-49 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr1g0255 - - gmx:100812044 703.745
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr1g0255 1 2845784 2850312 Mtr3g3874 3 52573529 52578526 PCT