Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr1g0245 ATGAATCATAACCTGCAAAGTTTCTTGGAAACTTTTCCTGGTATTTATTCCGGGGCAATGGTTGGGATGAGTCGTGGTAGTAATACTGCTTCTTTGCCAACATTTCCCGGCAGTGAGAGGGCAAGGGAATCTTTTTCTTCTAGAGGGCAATTCTGTGTTACAAGCCCTGCTTCTGGTTTAAATTTTTGGAGCTCAAATATGCAATCGAAATCAAAATCGGCTTTTGAATGCTTCTCAGCTAAGTATGCAACTCCTTCTGTGAGTGGGTGTCCTCGGGTCTTCTGCATGGGAAAAAGTGGCCATCTTCTTCTAAGCAATACTGGGCATCTTGGTATTGTTTGCTCATGTCACTGTTGCCACATGTCTATACTCAAGTTTTGTGAGCATTCAGGGTTACACGGTGTCAACCCGGGGAATGCTGTTCGCATGGAAAGCGGAGAGACCATTGCACAGTGGCAGAAGTTGTATTTCTTAAAATCTGGGATTATATCTTCGGGAAATGAGAGTGAATGGGACTGGCCAGAAGTATTTTCAACAACCAGCCATCTGATGAAATCCAATGCATCTGCATCTGATATGTCGAAGGGTGATTTCTCAAATATTCTCAATTCGGCTACAGTCACATTAAGAAAACAACCGATATCAAACGAGGATGGTCACAATATTCCACTCAAGGGTTTGAACGCTTTTACGCAGAACAACCTGTATGACCAGGTGAAAAGCCAGATAATGAAATCTAATATGGCTATTTGTACACCTGCACCAAACTTCGTTGGAGCTCAACTGAATGATGGTTGTCAGCCTATACCTCCTTTCCTTGATTCTCTGAAAAGCAATGAATACTTGCCAATTACCCAGTCTACACAAATTCCAACAAACCTTCTAAAAGAGCATGAATGTATCAAAAAGAAGAATGTAAAGACTGGTCTACTAGGAAAAGATGTAACTTCCTCTAACATTGAGCTTAGGCTTGGTCAACCACCTTGGGCTGGAAATCTAGTTGATTCGTTTGTAGAATCACCATTGTTTACCTTTGCCAGTTCTCCGAAACTGCATTCCCTGATGCAGATGACTAATAACCTTAGCAGGGAGGAGGAATTACAAAATAGTTTTAGTCGTGCTGCCGGTTCATTCGAAATGCCCCTAAACTATATGTCTGGATGTAGTATTAATTCAGATGCTGCTATAGCTAGTTCACAAACTGACAATGTGGCCACGAGTTCATTGTTTTTACCATTTCCACAATTTAGTTCTCAACCCAAGGGGACAACAAATGCTTGTAAAAATTTGGTGAATGGTGGTATAATGCCCATGAACCTGCATTCTGAATACGATACTGTGCAATTTGGTTCTTCTAATGTTGACTGGAATAGTAATGGTCACAAAGGAAGGCAATCAAATGATTCTGCACTGGAATTCAATAAATATTTGGACAATGATAATGGTGAAAGGTTTGGTGAAGATTCCTGTACCAAAGTAAATTCTGGATTTGAAGTAAATCAGTTCATGGAATTTGGCTCTATCAGAAGAACTATTGATGGTAGTGGTAGCTGTACTCCAGTTGTTAATAGAAAGATATATGAATCAAGCTTTCCATCAGATACATCCGTGGGTGCAAATGCTTTGCTAGCCTCAAAAAATGTATCTTCTTTTGGACGAAACAATCATTTGACTTTGGGGACAGTTGTTCCATTTGTAGGAAATTTGAAGAGTCTTCCCTATCCTGTTTCAAGCTCTGCATCAAATCAAAATCCTACTTCACTGCAACAACAGGGTATTAATATGGATACTTGCATGATTGATGAAAATACGAGGTTGCTTCCATTGACCCAGATGCCGGAGTCATCCAAGCAACAACAAGCTTTGTATTTTCATGATATGAATCAAAAGCTAGGGAAATCAGGTATTGCAGAACCCCAGAACTATATATACAAGGCTTCAGTACCTGAGCTGGGTTCTTCTGGTGCATCATTGAAATTTCCCCAAAATAGGGGGACTTGTGGGAATCTTGAGATTACTGATGGTTTGAACAGATATTGTGATTTCTCTGCCTTAACACCAACACCTTTACAATCTAAACAAAAGGAATCGCAATGTAAAAATTCCTACGATCTTCAAAATGATGGGCCGTATTTGAGCCTTGGAATGACCAGATCAAGTAGAAAATGCTCTGAGAAACAATCAGATGTATATTTGTTAGGCAAATATGTTAGTGCTGCTCGAGAAAATTGTTGCAGAAACAATGTTTGCACTGGAATTGGACCCTCTTGTGATACTGCAAAAGAAAAGTATGCAGATGTTAATGGTGTGACCTCTTTTAAGATAGCTTCAGAGTGTGGTAGAGATCAGAATGCTCCGAAGAATAAAAATATCTACTTCGATCCAAGTGGATTAGGTTCTCATGGCACAGTAAAAAATGGCTCTCATACACCTCAATGGAGAGATGTGCCAAGCAAGATCAGGAAACCATCACGTGATACAACACTTTTAGATCAGATGGCTACTGTATTTGAAGGACAAGACGGTGCTCAAGTGGGAAACATTTCTGCCAAACCTTTGGAAAAAATTATTGGTACGGAAGCCTTGTTGAAAGAGCAGGATTTTTTTTATGTTTCTTCTGGATGTTCTGCTCCCGTTGTTTATCAGGCCTCTGTGATGGAGGCGAACAAGGTTAATTCTTATACTGTAGATCCTACAAATGCTGGTTGTATTGAGAAACTTGTGCGTGACGAGGGGTCAGGAATTGATAAAGGCTGGTCATCTGATTTGATTGAAAGTGAAAGAAGTGCCGAGTTTGCAGGCTCAACCATTGGGAGTGACTTGAAAAAAGGTTATCTGAGAATCCTAAATGATCAACCATGCCAGAGTCTCCTTGATGATATTAAACTGTTGGATTCTTTGATTTGGAAGAAAAGGCAGGACCAAAATCATATAATAGTTAGTGCTGATTGTAGAACCAATCCATCTCAAAAAGTCAAGGGCTTTAAAGGAAAAAAGCAAAAGAGAAATGAGGCAAGAATTCCGGATGCTTCATTGCTTCCTGGAATCTCTTCCTCATCTGACAACCAGAATGGTACAAGTGCTGGAGCTTTTGATCCCCCTTCTAGTTTATCTGAAGAAATGCAATTTTACCATTCAACTAGCCAGCAAAGATCAGCTAACAAGGCTTATATTGTTCAACCTAATACTAATCATAAACTCTCTTCATTTCCATCTGAATTTCCCTCTTGTAAGAATCATCTAAACAAGCGTTACAACGATGAAGATAGCTATGAGTCAGAATCAATTTCAGATGTGGAGTTTCACACGTTACCTGGAATTTCTAGAATGAAGAAATCAAGGAAGGATTTAGCTTCTGATTTCTTCGGACAATTTCAAACTCAAGAAACATCACATGAGGAACCTAATAATGCTAAGCAAATATCATCTTCTAGCAGAAAAGGAAGTGCTCATAGAATCAAAAGGGTAGTAGTGTGTGGAAAGTATGGGGAAATATGTAGCGAATTATCAATTACAGAAGTACCAAAACCAGCAAAAATTGTCTCCCTAAGCGAGGTCCTTAGAACTTCCAAAAGATGTAGTATGGTCCCACCAATTGAAACACCCAGACTAACTACAAAAAAGAAATGGAGGAGATTGGGCTTTGGAAAAAGTTTGGGGCATAGCTGTACAAAATCTGGTTTAAAAGCTAAGAAGGATGACAAACCTGTAGACACAATAGTTTGCAATGAAACAATTTCTATGGAAGGTTTTGAGAGTGGCAACAAGCAAAATGTTTACAAACAGAAGAAAGATACCAACGAATGGCAGAGTGATATTGTACATAGGGCTTATTCTCCATTGAAGGTTAAGAGCAGAAAAATTCAGAAACTGCGCAGCATTAATGAAATTACTGCTAAAGAAACCCAAATGCTGGATATTTTGGAGTATGCAGAAGATCACGAGCTTGATTTGTGTAACAAAAGAAGTAAAATCTCTGTTCAAGAACACACAGACATGTCCTTCATTAATTCAGATTCTTTCTGCTGCGTCCGTCGAAGGCCAATCAGTGATGAACTTAACAGTTCATTGAAGTGTAATAAATGTCTAATTAAAGTGCATCAGGATTGCTATGGTATTAAAGCATTGCCCGAACGAGGTTGTTGGTGTTGTAGACCATGCCAAACAAATTCAAAAGATATTAACCTGTTGCTAAATGAAACTGAGGGAATTAACGACGAGAAAGTTGAATTTTATGGAAGATGTGGGCTTCATGGTATTGGCCCTGAATGTCAGTCTGCATATGATCCTACCGATGTGATGGGCAGTCGAGCGGAAAAGGAATTTACCTGTGCTAGGGCAGAGGGTTACAAGGGCCGTAGATGGGATGGTATCTATAATAATCATTGTAGTGCCCTGAAACGCCGGGGTGGATGCCTTATTCCGGACGAACAGTTGAATGCTTGGATTCACATAAATGTGCGAAAATTGCGTTCACAAGGAATTCCAAAATTTCCAGATTCAGATATTGAGCATGATCCTCGGAAAGAATATGCTTGGTACAAACAAGTGAAGGGCTGGAAAAATCTTGTTGTATACAAATCTGGGATACATGGCCTTGGTCTTTATACTTCTCAGTGCATATATAGGGGTAGAATGGTTGTAGAGTATGTCGGTGAAATTGTGGGACAACGTGTGGCTGATAAAAGAGAGATTGAATACATATCTGGAAGGAAACTTCAGTACAAAAGTGCCTGCTACTTCTTTAAGATAGACAAAGAACATATAATTGATGCCACGAGGAAAGGGGGGATCGCTCGATTTGTTAACCATTCATGTCTGCCAAATTGCGCGGCAAAAGTGATTACCGTCAGGCGTCTGAAGAAGGTTGTCTTCTTTGCGGAGAGGGACATATTACCTGGTGAAGAGATTACTTACGATTACAACTTTAACCGAGAAGATGATGAAAAGAAAATTCCATGTTATTGCAATTCAAAAAATTGCAGGCGCTCTCTGAACTGA 5001 0.3963 MNHNLQSFLETFPGIYSGAMVGMSRGSNTASLPTFPGSERARESFSSRGQFCVTSPASGLNFWSSNMQSKSKSAFECFSAKYATPSVSGCPRVFCMGKSGHLLLSNTGHLGIVCSCHCCHMSILKFCEHSGLHGVNPGNAVRMESGETIAQWQKLYFLKSGIISSGNESEWDWPEVFSTTSHLMKSNASASDMSKGDFSNILNSATVTLRKQPISNEDGHNIPLKGLNAFTQNNLYDQVKSQIMKSNMAICTPAPNFVGAQLNDGCQPIPPFLDSLKSNEYLPITQSTQIPTNLLKEHECIKKKNVKTGLLGKDVTSSNIELRLGQPPWAGNLVDSFVESPLFTFASSPKLHSLMQMTNNLSREEELQNSFSRAAGSFEMPLNYMSGCSINSDAAIASSQTDNVATSSLFLPFPQFSSQPKGTTNACKNLVNGGIMPMNLHSEYDTVQFGSSNVDWNSNGHKGRQSNDSALEFNKYLDNDNGERFGEDSCTKVNSGFEVNQFMEFGSIRRTIDGSGSCTPVVNRKIYESSFPSDTSVGANALLASKNVSSFGRNNHLTLGTVVPFVGNLKSLPYPVSSSASNQNPTSLQQQGINMDTCMIDENTRLLPLTQMPESSKQQQALYFHDMNQKLGKSGIAEPQNYIYKASVPELGSSGASLKFPQNRGTCGNLEITDGLNRYCDFSALTPTPLQSKQKESQCKNSYDLQNDGPYLSLGMTRSSRKCSEKQSDVYLLGKYVSAARENCCRNNVCTGIGPSCDTAKEKYADVNGVTSFKIASECGRDQNAPKNKNIYFDPSGLGSHGTVKNGSHTPQWRDVPSKIRKPSRDTTLLDQMATVFEGQDGAQVGNISAKPLEKIIGTEALLKEQDFFYVSSGCSAPVVYQASVMEANKVNSYTVDPTNAGCIEKLVRDEGSGIDKGWSSDLIESERSAEFAGSTIGSDLKKGYLRILNDQPCQSLLDDIKLLDSLIWKKRQDQNHIIVSADCRTNPSQKVKGFKGKKQKRNEARIPDASLLPGISSSSDNQNGTSAGAFDPPSSLSEEMQFYHSTSQQRSANKAYIVQPNTNHKLSSFPSEFPSCKNHLNKRYNDEDSYESESISDVEFHTLPGISRMKKSRKDLASDFFGQFQTQETSHEEPNNAKQISSSSRKGSAHRIKRVVVCGKYGEICSELSITEVPKPAKIVSLSEVLRTSKRCSMVPPIETPRLTTKKKWRRLGFGKSLGHSCTKSGLKAKKDDKPVDTIVCNETISMEGFESGNKQNVYKQKKDTNEWQSDIVHRAYSPLKVKSRKIQKLRSINEITAKETQMLDILEYAEDHELDLCNKRSKISVQEHTDMSFINSDSFCCVRRRPISDELNSSLKCNKCLIKVHQDCYGIKALPERGCWCCRPCQTNSKDINLLLNETEGINDEKVEFYGRCGLHGIGPECQSAYDPTDVMGSRAEKEFTCARAEGYKGRRWDGIYNNHCSALKRRGGCLIPDEQLNAWIHINVRKLRSQGIPKFPDSDIEHDPRKEYAWYKQVKGWKNLVVYKSGIHGLGLYTSQCIYRGRMVVEYVGEIVGQRVADKREIEYISGRKLQYKSACYFFKIDKEHIIDATRKGGIARFVNHSCLPNCAAKVITVRRLKKVVFFAERDILPGEEITYDYNFNREDDEKKIPCYCNSKNCRRSLN* 1667
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr1g0245 1666 MobiDBLite consensus disorder prediction 989 1037 - -
Mtr1g0245 1666 ProSiteProfiles SET domain profile. 1521 1642 IPR001214 GO:0005515
Mtr1g0245 1666 MobiDBLite consensus disorder prediction 1126 1147 - -
Mtr1g0245 1666 PANTHER HISTONE-LYSINE-N-METHYLTRANSFERASE 2 KMT2 FAMILY MEMBER 67 1394 - -
Mtr1g0245 1666 PANTHER HISTONE-LYSINE-N-METHYLTRANSFERASE 2 KMT2 FAMILY MEMBER 1396 1666 - -
Mtr1g0245 1666 SUPERFAMILY FYVE/PHD zinc finger 1334 1390 IPR011011 -
Mtr1g0245 1666 CDD SET_SETD1-like 1523 1662 - -
Mtr1g0245 1666 SMART set_7 1521 1648 IPR001214 GO:0005515
Mtr1g0245 1666 Pfam SET domain 1532 1642 IPR001214 GO:0005515
Mtr1g0245 1666 SUPERFAMILY SET domain 1516 1662 IPR046341 -
Mtr1g0245 1666 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 1326 1394 IPR013083 -
Mtr1g0245 1666 ProSiteProfiles Post-SET domain profile. 1650 1666 IPR003616 -
Mtr1g0245 1666 Pfam PHD-finger 1357 1387 - -
Mtr1g0245 1666 Gene3D SET domain 1504 1666 IPR046341 -
Mtr1g0245 1666 SMART PostSET_3 1650 1666 IPR003616 -
Mtr1g0245 1666 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE TRITHORAX 1396 1666 - -
Mtr1g0245 1666 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE TRITHORAX 67 1394 - -
Mtr1g0245 1666 MobiDBLite consensus disorder prediction 1013 1037 - -
Mtr1g0245 1666 Pfam Tify domain binding domain 108 155 IPR032308 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr1g0245 Mtr-Chr1 2732902 2751303 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr1g0245 1523 1662 C2H2 Transcription Factor Family AT2G23740 34.591 4.75e-18 89.4
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Mtr1g0245 SET 9.3e-19 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr1g0245 - - mtr:MTR_1g012870 2607.02
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr1g0245 1 2732902 2751303 Mtr1g0245 1 2732902 2751303 ECH