Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr1g0228 ATGAGAAATCATTGGCCTCTTTTCCATATTGTGAATACCCTATGGTTATGTTTGTGTATCATACTTTTGTCAGAAGTAGTTTTGGTTTCGGCTAGTATTCAACGGATTGGAAAGATCTCACCTGGATTTGAAGGCTCTCAAATGAATTGGATTGATAGGAATGGAAAATTTCTTGTGTCAAACAAACAAGAATTTGGTTTTGGCTTTATCACAACTTCAAATGACAACACATTGTTTCTACTTGCAATAGTCCACATGGATAGCACAAAAGTTGTTTGGACTGCAAATAGAGAATCTCCTGTTTCTAATTCTGATAAGTTTGTGTTTGATGAAGAGGGTAATGCTTTTTTACAAAAAGGAAAAAATTCAGTTTGGTCAACAAATACAAGTGGCATGAAAGTTTCTTCAATGGAATTACAAGACAATGGAAATTTAGTTTTGCTTGGAAATGATAGTAATGTGATTTGGCAAAGTTTTGATCATCCAACAGATACATTATTACCAATGCAAAAATTCACCAAAGGAATGAAACTTATCAGTGAACCTGATTCTAACAATTTCACCTATGTCCTCGAAATTGAATCACATTCTGGTAATGTTCTTCTTTCCACAGGTTTACAATCTCCACAGCCTTATTGGTCTATGCAAAATGATATCCGAAAAATACCTAATGAAAACGGCGACGAGGTAAATTTTGCAACTCTTGATGCAAATTCATGGAAGTTCTATGACAAAAGGAAATCATTGTTGTGGCAATTTATTTTTTCTGATGCTGCAAATGCAACTTGGATAGCAGTTTTAGGAAGTGATGGCTTCATAACTTTCACCAATCTTAAAAATAAAGGCTCAAGTGGTTCATCGACAACAAGAATACCTCAAGATTCTTGTAGTACACCACAACCTTGTGGACCTTATAACATATGCATTGGTGACAAAAAATGCAGTTGCCCTTCTGTTCTTAGCTCCAGTCCTAGCTGTGAACCGGGTTTTGTTTCGCCTTGTAACTCGAAAAGTTCCGTTGAGCTTGTTAAAGGTGATGATGGACTCAATTACTTTGCACTTGGATTTCTTCCACCTTCTTTGAAAACCGATTTGATTGGTTGCAAAAATTCTTGCAGTGAAAACTGCTCATGTCTTGCTATGTTCTTTCAAAGCAGTTCAGGAAACTGTTACCTTTTAGATAGGATTGGAAGCTTTGTGAAAACTGATAATGATTCTGGCTTTGCCTCTTACATTAAAGTCTCAAGAGACGGAAGTAGTGACACAGAAACAGACACAGCAGAAAGTAGAAACAGGAATGTGCAGACAATAGTTGTTGTGATCATTGTAATAGTAACATTGTTTGTCATTTCTGGCATGATTTATGTGGGACTAAAATGCTCAAAGAAAAAGGAAAATTTGCCTGAATCTCTGGTCGAGAATTCAGACGGTGATGACGATTTCTTGAAGAGTTTAACTAGTATGCCGATCCGTTTCAGCTACAACAATTTAGAAACTGCGACGAATAACTTCTCGGTGAAGTTAGGTCAAGGTGGTTTCGGTTCGGTATATAAAGGAATTCTAAAAGATGAAACTCAAATAGCTGTGAAGAAATTGGAAGGAATTGGTCAAGGGAAGAAAGAATTTAAGGTTGAAGTTAGCACAATTGGAAGCATTCATCACAATCATTTGGTAAGGCTTAAAGGTTTTTGTGCTGAAGGATCTCATAAACTTCTTGTTTATGAATATATGGAAAATGGTTCATTGGATAAATGGATATTCAAAAAAAATAAAGAATTATCTTTGGATTGGAACACAAGGTACAAAATTGCAGTAGGAACAGCCAAAGGACTAGCTTATTTGCATGAAGATTGTGACTCAAAGATTGTTCATTGTGATATTAAACCAGAAAATGTGCTTTTAGATGATAATTTTGAAGCCAAAGTTTCCGATTTCGGTCTTGCGAAGCTCATGAACCGTGAACAAAGCCATGTTTTTACAACAATGAGAGGAACAAGAGGTTATTTAGCACCAGAATGGATCACAAACTATGCTATATCAGAGAAAAGTGATGTTTATAGCTATGGAATGGTGTTGTTAGAGATTATTGGAGGAAGGAAAAACTATGATCCTAAAGAAAATTCGGAGAAATCGCATTTTCCTTCTTTTGCTTATAAGATGATGGAACAAGGGAAGATGGAAGATTTAATTGACTCTGAGGTGAAAATATGTGAAAATGATGTGAGAGTTGAGATTGCTTTGAATGTTGCATTTTTGTGTATACAAGAAGATATGTGTTTGAGGCCTTCTATGAATAAAGTTGTACAAATGCTTGAGGGTCTATGTGATGTTCCTAAGGTACCAAATGGGTCTCCATTAGGTTCTAAATTTTATTTAAATTTGCTTAGACCAACAAGTGAGAGTGGGACTTCTTCAGAACCAACAGAGGTGAATAGTGATGCATATCTCTCGGCTGTTAGACTTTCAGGGCCAAGATAA 2478 0.3588 MRNHWPLFHIVNTLWLCLCIILLSEVVLVSASIQRIGKISPGFEGSQMNWIDRNGKFLVSNKQEFGFGFITTSNDNTLFLLAIVHMDSTKVVWTANRESPVSNSDKFVFDEEGNAFLQKGKNSVWSTNTSGMKVSSMELQDNGNLVLLGNDSNVIWQSFDHPTDTLLPMQKFTKGMKLISEPDSNNFTYVLEIESHSGNVLLSTGLQSPQPYWSMQNDIRKIPNENGDEVNFATLDANSWKFYDKRKSLLWQFIFSDAANATWIAVLGSDGFITFTNLKNKGSSGSSTTRIPQDSCSTPQPCGPYNICIGDKKCSCPSVLSSSPSCEPGFVSPCNSKSSVELVKGDDGLNYFALGFLPPSLKTDLIGCKNSCSENCSCLAMFFQSSSGNCYLLDRIGSFVKTDNDSGFASYIKVSRDGSSDTETDTAESRNRNVQTIVVVIIVIVTLFVISGMIYVGLKCSKKKENLPESLVENSDGDDDFLKSLTSMPIRFSYNNLETATNNFSVKLGQGGFGSVYKGILKDETQIAVKKLEGIGQGKKEFKVEVSTIGSIHHNHLVRLKGFCAEGSHKLLVYEYMENGSLDKWIFKKNKELSLDWNTRYKIAVGTAKGLAYLHEDCDSKIVHCDIKPENVLLDDNFEAKVSDFGLAKLMNREQSHVFTTMRGTRGYLAPEWITNYAISEKSDVYSYGMVLLEIIGGRKNYDPKENSEKSHFPSFAYKMMEQGKMEDLIDSEVKICENDVRVEIALNVAFLCIQEDMCLRPSMNKVVQMLEGLCDVPKVPNGSPLGSKFYLNLLRPTSESGTSSEPTEVNSDAYLSAVRLSGPR* 826
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr1g0228 825 Gene3D - 49 161 IPR036426 -
Mtr1g0228 825 PIRSF SRK 11 821 IPR024171 GO:0004674
Mtr1g0228 825 MobiDBLite consensus disorder prediction 800 825 - -
Mtr1g0228 825 SMART serkin_6 502 771 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr1g0228 825 CDD B_lectin 51 162 IPR001480 -
Mtr1g0228 825 PANTHER G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-KINASE SD2-5 1 825 - -
Mtr1g0228 825 ProSitePatterns Protein kinases ATP-binding region signature. 508 531 IPR017441 GO:0005524
Mtr1g0228 825 ProSiteProfiles Bulb-type lectin domain profile. 43 160 IPR001480 -
Mtr1g0228 825 PANTHER G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD2-5 1 825 - -
Mtr1g0228 825 ProSitePatterns Serine/Threonine protein kinases active-site signature. 622 634 IPR008271 GO:0004672|GO:0006468
Mtr1g0228 825 CDD PAN_AP_plant 363 415 - -
Mtr1g0228 825 Pfam D-mannose binding lectin 91 173 IPR001480 -
Mtr1g0228 825 SMART blect_4 49 162 IPR001480 -
Mtr1g0228 825 Gene3D Phosphorylase Kinase; domain 1 472 576 - -
Mtr1g0228 825 CDD STKc_IRAK 508 774 - -
Mtr1g0228 825 Pfam Protein kinase domain 506 769 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr1g0228 825 SUPERFAMILY Protein kinase-like (PK-like) 483 772 IPR011009 -
Mtr1g0228 825 Gene3D Transferase(Phosphotransferase) domain 1 577 780 - -
Mtr1g0228 825 SUPERFAMILY alpha-D-mannose-specific plant lectins 91 180 IPR036426 -
Mtr1g0228 825 ProSiteProfiles Protein kinase domain profile. 502 774 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr1g0228 Mtr-Chr1 2568752 2572267 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr1g0228 481 782 Receptor kinase-like Gene Family AT5G20050 46.395 1.17e-87 283
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_SD-2b Mtr1g0228 Pkinase 1.6e-50 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr1g0228 - - gmx:100787500 1168.68
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr1g0228 1 2568752 2572267 Mtr1g0228 1 2568752 2572267 ECH
Mtr3g3907 3 52914792 52917743 Mtr1g0228 1 2568752 2572267 ECH
Mtr1g0228 1 2568752 2572267 Mtr3g3907 3 52914792 52917743 PCT