Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr1g0206 ATGGATTCTCCAGAAGCTTCGAAGATCAATAACATTTCTTCTTCTCTCTCCACTATCAATGCCGCCACAAACAATCCTTCTGATGAATCCCCTCAAGTTCAAGAATCTCCCTTTTTGAGATTTGTCAACACTCTATCTCCGATAAAGCCTGTCAAGGCTTCTCATGCGACACATGGGTTTCTCGGACTCAATTCTCCACCCCTCGTATTCAAGTCACCACGTATCAGTGCTCCCCACCGTGAAACACAATACTCGGAAAGGCTTGAAGGTACCCATTTATCAGATACAGAAACATCTCAAAGTAACATAGGAGACAACAGTCTTGGTGAAGCTCATAGCGATTTGAAGAAATTGAATTCTCAACTGCCATTGCCAGAGGTGTTTATACCAGTTGCTCAAAAGGATTTTGACCTCAAGAATGACGCGAATACCCAAAGCAGCAGTCCTCCAGCATCTGTCGATGAATATTTGGCTGATCCCGTGGATGATCAAATGTATCCAGTCAACCCAGAAATGGAACAATCTACTGATGCGGTTGGGTCATCATCACTAACTGAGTCGGAGAAAGTTATATTAAAATTTGATAGAAGTGACGGTCCTAGTAACATAGCAGAAGAACTTTTGCCTTTGTTGGAGGAATCTAATATGGTTCATCAAGAAAGGACAGAATATGTTGAAAATCCTGCAACAATAGAAGGGGAGAAAAATGGTGCTGAATTGGTTTCTCAAGAGCACATAAACTTAGGCTCGAGTTCAGGTGCAGATGTTTTTGATAAACAATATTGTCATGATTCACTTCCCCAGTGTACAGGAAATGATCAACGGCATCATAGTGACTGTGCACCTCAATTGATGCCTGATCCTATCCAGGTAGTTAAAGAAGTTGAAAATTGCAGTGAGATGGTGTCAACCTCACAAGTAAATTCAGAGAATATCCCACAAGATGGCTCTGAGTCAATGCAGGCTAGTCTAAAGTATCATGGCATCCGTAGACGCTGCCTGCAATTTGGGGAAGCTGCTTCCGTTGTTCTTGGAAGTAATAAGTCTCATGTGAAATTGAATACAACTTCAAGCAATGCAAAAATGGTTTCTGTGACAGTTTCCAAGCCACCAGGCATTGGGTTGCATTTAAATAGCATTATAAATGCAATGCCACCTAGTTGTGCTTCAACTACAGGTGTGAGATTATCAGATGGTTTACCGGGGTCCAAATCTTCTATAAGTTTGCATATAGTGGAAAACGCAACAAGATCCTCAACTCCGTCCAATATGGATGGTCAATCTTTTATTGATACTAGGAATGAGAGCAATGAAACTGATGCTTCAGTAGTTGCAGATTCTTTCATTTCGGAGTCTCCTATCTTGACAGAATCCATCGACCTATATCCGGCAAATGCACCTGATAAGAGGAGGGTAAGCCCTACAGATGCTGAGGAATTCAACCATCCTAGCACCTCCAGGAAAAAGAAGAAAACAAGTACTGATGACGCCAGTGGACCTAAGACGTGCAACTGTAAGAAGAGTAAATGTTTGAAACTTTACTGTGATTGTTTTGGTGCTGGAATCTTCTGTGGTGACGGTTGTGCTTGCGAAGGCTGTGGTAATAGAGTAGAATTTCAGGATAAAGTTGTTGAAACAAAACAACAAATTGAATCCCGTAATCCACAAGCATTTGCTCCCAAGATTGTACCATGTGCAGCTGATGTTCCACCGAATAATATGGAAGATGTGAATATGACAACACCGGCATCAGCTAGGCACAAAAGAGGTTGCAATTGCAAAAGGTCAAAGTGTACAAAAAAATACTGCGAATGTTTTCAGGCTAATGTTGGATGCTCAACTGGATGTCGATGTGATGGGTGTATGAATGCCTTTGGCAAGAGAGAAGATTTTGTGGCAATGGAACATGCTTCTAGCAATGAAAGGGAGAGCAGCATTGTTGAAGAAGGGTTGGATGACAAACTGCACAAAAGACAGAAAATTGTGACAATCAGGACAGACTTGTTACGACCAGCAAATCACCTCTCACCTGTAACACCATTGTTGCAATGCTCTGACCAAGGCAAGCAGGGTGCAAAGTCCAGACATTCCTCTACAAATTTGACTAAATCTTCTAAAAAACCACGCAGCAGTCTTGCACATTCAGAGTCGAATGATTCTCAGAAGAATGCTCCTCCTACACATTCTTCATCTACAGAAAATGAGTGGATAGATCTTCCACCATACCAGCTCTCCAATAGATGCGGTATTCGCCAGTTGTCTGGGGGCTCTCTTCGTTGGCGCGGTAGTTCACCGATTACCCCAAGCGCCAACTTAGATGATGAATCAGATGGGAAGCTCTTTGACATTCTAGAAGATGAAACACCTGATGTATTGAAGGAAGCTTCAACTCCCATCAAGTCTGTGAAAGCAAATTCTCCAATCCAAAAGCGAGTTTCTCCTCCACAGAGCCATCTACTTCGGATTGGATCAAGCTCCTCAGGTGGCTTGAAAAGTGGCAGGAAATTTATATTGCAATCTGTTCCTTCATTCCCGCCATTGACCCCTTGCGCTGATTCTAAAGTCCTTAATGACAATGAGGATTCGGGTAACAGCACAGATAAAGTGACATAA 2613 0.4237 MDSPEASKINNISSSLSTINAATNNPSDESPQVQESPFLRFVNTLSPIKPVKASHATHGFLGLNSPPLVFKSPRISAPHRETQYSERLEGTHLSDTETSQSNIGDNSLGEAHSDLKKLNSQLPLPEVFIPVAQKDFDLKNDANTQSSSPPASVDEYLADPVDDQMYPVNPEMEQSTDAVGSSSLTESEKVILKFDRSDGPSNIAEELLPLLEESNMVHQERTEYVENPATIEGEKNGAELVSQEHINLGSSSGADVFDKQYCHDSLPQCTGNDQRHHSDCAPQLMPDPIQVVKEVENCSEMVSTSQVNSENIPQDGSESMQASLKYHGIRRRCLQFGEAASVVLGSNKSHVKLNTTSSNAKMVSVTVSKPPGIGLHLNSIINAMPPSCASTTGVRLSDGLPGSKSSISLHIVENATRSSTPSNMDGQSFIDTRNESNETDASVVADSFISESPILTESIDLYPANAPDKRRVSPTDAEEFNHPSTSRKKKKTSTDDASGPKTCNCKKSKCLKLYCDCFGAGIFCGDGCACEGCGNRVEFQDKVVETKQQIESRNPQAFAPKIVPCAADVPPNNMEDVNMTTPASARHKRGCNCKRSKCTKKYCECFQANVGCSTGCRCDGCMNAFGKREDFVAMEHASSNERESSIVEEGLDDKLHKRQKIVTIRTDLLRPANHLSPVTPLLQCSDQGKQGAKSRHSSTNLTKSSKKPRSSLAHSESNDSQKNAPPTHSSSTENEWIDLPPYQLSNRCGIRQLSGGSLRWRGSSPITPSANLDDESDGKLFDILEDETPDVLKEASTPIKSVKANSPIQKRVSPPQSHLLRIGSSSSGGLKSGRKFILQSVPSFPPLTPCADSKVLNDNEDSGNSTDKVT* 871
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr1g0206 870 MobiDBLite consensus disorder prediction 757 771 - -
Mtr1g0206 870 MobiDBLite consensus disorder prediction 844 870 - -
Mtr1g0206 870 MobiDBLite consensus disorder prediction 757 776 - -
Mtr1g0206 870 SMART CXC_2 498 539 IPR033467 -
Mtr1g0206 870 SMART CXC_2 586 627 IPR033467 -
Mtr1g0206 870 MobiDBLite consensus disorder prediction 413 437 - -
Mtr1g0206 870 MobiDBLite consensus disorder prediction 471 496 - -
Mtr1g0206 870 MobiDBLite consensus disorder prediction 465 501 - -
Mtr1g0206 870 PANTHER PROTEIN TESMIN/TSO1-LIKE CXC 4 1 858 - -
Mtr1g0206 870 MobiDBLite consensus disorder prediction 804 831 - -
Mtr1g0206 870 MobiDBLite consensus disorder prediction 94 108 - -
Mtr1g0206 870 ProSiteProfiles CRC domain profile. 499 626 IPR005172 -
Mtr1g0206 870 Pfam Tesmin/TSO1-like CXC domain, cysteine-rich domain 589 624 IPR005172 -
Mtr1g0206 870 Pfam Tesmin/TSO1-like CXC domain, cysteine-rich domain 501 536 IPR005172 -
Mtr1g0206 870 PANTHER PROTEIN TESMIN/TSO1-LIKE CXC 2 1 858 IPR044522 GO:0003700
Mtr1g0206 870 MobiDBLite consensus disorder prediction 714 735 - -
Mtr1g0206 870 MobiDBLite consensus disorder prediction 679 735 - -
Mtr1g0206 870 MobiDBLite consensus disorder prediction 80 110 - -
Mtr1g0206 870 MobiDBLite consensus disorder prediction 679 708 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr1g0206 Mtr-Chr1 2355122 2361475 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr1g0206 324 849 CPP Transcription Factor Family AT3G22780 32.537 2.55e-60 216
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF CPP Mtr1g0206 TCR 8.8e-11 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr1g0206 K21776 - gmx:547664 779.245
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr1g0206 1 2355122 2361475 Mtr1g0206 1 2355122 2361475 ECH
Mtr1g0206 1 2355122 2361475 Mtr3g3294 3 46847949 46849934 PCT