Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr1g0204 ATGGCAAAGAAGAAAAACTCCATGGTGTTTATGGATGTGTCTGTAGATGGGGATCCTTATGAAAAAATGGTTTTTGAGCTTTTCTACGATGTTGCTCCAAAGACTGCCGAAAATTTTCGTGCACTGTGTACCGGAGAAAAAGGAGTAAGTCCTAATACTGGAAAATCACTGCACTACAAGGGTTCTTTCTTCCATCAGATCTTAAAAGGCTCCATTGTTAAGGGTGGAGACTTTATCAATCGAAATGGGACTGGTGGAGAGAGCATATACCCCAAGTTCCCAGACGAGTCTCCTAGGCTAAAGCATGATTCTCCAGGCCTTCTATCTATGGCGATTGCTGATCGTGACACTCTTGGTTCACATTTTATCATCACTTTGAAAGCTGATCACCATCTTGATAGGAAGCATGTGGTTTTTGGCAAGCTTGTGCAGGGGTATGATATATTGAAGAAAATTGAAGATGTAGGCAATGAAGAAGGACTACCAACCGTAACTGTCAAAATAATTAATAGCGGTGAACACAATGAGGATGGAAAGAAGACACACAAGTCAAAAATTGGAAAGAATGCATCTTCTGAAGCAAATAGTCATGAAGTGCGGAGAAAGGGAAAGCATAAAAAATCTTCAGGAGACAGAAGGAAGAAGAGAAAACATTACTCATCAGAATCAGATAGTTCCTCAGATTCCGACTTGGAATCTTCTGAAAGTGATAGTGACTCTGACTCAGATTTGTCCTCGTCATCTTACACAAGTTCATCTAGCGATGACAGGCGAAGGAAAAGAAAGAGATCTAGGAAAGATAAACATAGACATGGAAAAAGAAGAGATAAACGTCGAGAAAAGAGGCGAAGGAAACAAGATAAGAGATCAAAACGTAAATCAAGGAGGGAATCAGGCAGTCATTCTGATGCAGATAGTGCAAGTAAGAGTAACGATAATTCTAACGGCAAAGGTCTTGATACTCAAGAGAAAATTCTGAAGCAAAAAGATCATTCTCAGATAGCTGCTGAAGTCCAGTCATCCTCAGTTTTGGAGAAAGAATTACCTCCACTGAATCATAAAAAGAGGGACGGGGTGGGCATGCTAGATGAGGAAGAATTACCAAAAGAAAATGGAGCGCAGCCTAGCAACGGCATCAGGGCCAACTATAGACCTGACAGAAGTGAAGAGAGGCAGCATGACGTGATGGATGATAATCCAGGAAAATCTAGGAGTCGAAGCATGAGTCCTAAGCAAACCGTGAGCAAGAGTATGAGTATTAGTCCCAAGTGTGTGTGCAAAAGCCCGAGCATTAGTCCAAAGAGGAGGTTTAGCAGAAGTCCAAGTGGTAGTAAAAGTCCTCGTGCTCCATCGCAGAGGAGTTTGAGCAGGAGTCCTGTTAGAAGCATAAGCAGGAGTCTAAACAGAAACGTCAGCAGAAGCCCCGTGAGAGGGAGGAAGGGGAGAAGTATCAGTAGAAGCCCTATGAGAACAACACACATTCATAAAAGTGTCAGCAAGAGCCCTGTGAGAAGTCCCGATCGTAGAAGTCTTAGCAAGAGCCCTGCCAGATCTGTTTCTCAAAGCCGCAGGAGTTCTGCCAGAGTATCATCACGAAGAACAGTCAGTAGGAGTCCTGTAAGAATGTCAAGAAAGAGCATAAGCAGGAGTCCAGTTAGATCATCTGCCAGAAGTCTCAGCAGAAGTTCCGGCCGAGTTCCTTTGAGAAGCATTAGCCGAAGTCCTGTCAGAGTGGCAAGCAGAGGCAATCACCGCAGCTATTCCAGGAGTCGTAGCCCTGTTCGTAGGGCAAGGACACCTCGTGGGAGGAGTCTGTCGAAGAGTGTGTCACCTGATGCTTCACCAAAACGTATCAGAAGGGGAAGAGGTTTCAGTGAAAGATACTCTTATGCTAGAAGGTATAGAACCCCCTCTCGGTCTCCTGTGAGGTACCGCTATAATGGAAGGAATGACCGTGACAGATATTCAGGATACAGAAGGTACTCCCCTAGGCGTTTTAGGAGCCCACCGCCACGGAGAAGAACTCCACCAAGGTACCGGAGTAGGAGAAGCAGGACACCGTCTGTATCACGAAGCCCACCTTACCGAGCACGAAGGTATAGCCCAAGCCCTAGCCCAGTTCGCAACCGCTCACCTTCTCGTGTGAATAGGCGTGCGTCATCATCCCTCAGCAGGAGTCCATCTCGATCCAGGTCTTCTGTGGAATCACTATCTCCAAGGAAGCTAAGCAAAGATAACAGGTCAAGGTCTCCTTCTAGAAGCTCAGACGGAAAGAAAGGCCTGGTCTCTTATGGAAATGGTTCTCCTGATTCAAGCTAA 2319 0.4541 MAKKKNSMVFMDVSVDGDPYEKMVFELFYDVAPKTAENFRALCTGEKGVSPNTGKSLHYKGSFFHQILKGSIVKGGDFINRNGTGGESIYPKFPDESPRLKHDSPGLLSMAIADRDTLGSHFIITLKADHHLDRKHVVFGKLVQGYDILKKIEDVGNEEGLPTVTVKIINSGEHNEDGKKTHKSKIGKNASSEANSHEVRRKGKHKKSSGDRRKKRKHYSSESDSSSDSDLESSESDSDSDSDLSSSSYTSSSSDDRRRKRKRSRKDKHRHGKRRDKRREKRRRKQDKRSKRKSRRESGSHSDADSASKSNDNSNGKGLDTQEKILKQKDHSQIAAEVQSSSVLEKELPPLNHKKRDGVGMLDEEELPKENGAQPSNGIRANYRPDRSEERQHDVMDDNPGKSRSRSMSPKQTVSKSMSISPKCVCKSPSISPKRRFSRSPSGSKSPRAPSQRSLSRSPVRSISRSLNRNVSRSPVRGRKGRSISRSPMRTTHIHKSVSKSPVRSPDRRSLSKSPARSVSQSRRSSARVSSRRTVSRSPVRMSRKSISRSPVRSSARSLSRSSGRVPLRSISRSPVRVASRGNHRSYSRSRSPVRRARTPRGRSLSKSVSPDASPKRIRRGRGFSERYSYARRYRTPSRSPVRYRYNGRNDRDRYSGYRRYSPRRFRSPPPRRRTPPRYRSRRSRTPSVSRSPPYRARRYSPSPSPVRNRSPSRVNRRASSSLSRSPSRSRSSVESLSPRKLSKDNRSRSPSRSSDGKKGLVSYGNGSPDSS* 773
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr1g0204 772 MobiDBLite consensus disorder prediction 433 473 - -
Mtr1g0204 772 MobiDBLite consensus disorder prediction 645 660 - -
Mtr1g0204 772 MobiDBLite consensus disorder prediction 588 602 - -
Mtr1g0204 772 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 27 42 IPR002130 GO:0000413|GO:0003755
Mtr1g0204 772 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 64 76 IPR002130 GO:0000413|GO:0003755
Mtr1g0204 772 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 106 121 IPR002130 GO:0000413|GO:0003755
Mtr1g0204 772 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 121 133 IPR002130 GO:0000413|GO:0003755
Mtr1g0204 772 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 134 149 IPR002130 GO:0000413|GO:0003755
Mtr1g0204 772 MobiDBLite consensus disorder prediction 704 737 - -
Mtr1g0204 772 MobiDBLite consensus disorder prediction 512 569 - -
Mtr1g0204 772 ProSiteProfiles Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain profile. 10 173 IPR002130 GO:0000413|GO:0003755
Mtr1g0204 772 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE CYP63 1 365 - -
Mtr1g0204 772 MobiDBLite consensus disorder prediction 402 426 - -
Mtr1g0204 772 MobiDBLite consensus disorder prediction 348 370 - -
Mtr1g0204 772 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE 1 365 - -
Mtr1g0204 772 MobiDBLite consensus disorder prediction 304 321 - -
Mtr1g0204 772 Pfam Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD 11 171 IPR002130 GO:0000413|GO:0003755
Mtr1g0204 772 MobiDBLite consensus disorder prediction 383 401 - -
Mtr1g0204 772 MobiDBLite consensus disorder prediction 738 754 - -
Mtr1g0204 772 MobiDBLite consensus disorder prediction 172 772 - -
Mtr1g0204 772 MobiDBLite consensus disorder prediction 200 214 - -
Mtr1g0204 772 MobiDBLite consensus disorder prediction 172 187 - -
Mtr1g0204 772 MobiDBLite consensus disorder prediction 258 295 - -
Mtr1g0204 772 MobiDBLite consensus disorder prediction 665 685 - -
Mtr1g0204 772 SUPERFAMILY Cyclophilin-like 4 175 IPR029000 -
Mtr1g0204 772 MobiDBLite consensus disorder prediction 613 633 - -
Mtr1g0204 772 Gene3D - 1 174 IPR029000 -
Mtr1g0204 772 MobiDBLite consensus disorder prediction 755 772 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr1g0204 Mtr-Chr1 2336451 2344323 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr1g0204 25 171 U-box Gene Family AT5G67530 38.000 6.38e-18 86.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr1g0204 K09566 - jre:109001815 587.8
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr1g0204 1 2336451 2344323 Mtr1g0204 1 2336451 2344323 ECH