Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr1g0200 ATGTACACCATTCTATACAGTTTTTGCACAAAAAGACCAGAATTAGGTGCCAAGCTGTTTTTGGCTTGGGCTGGTTGGGTTTGTGTTTGGACATCATTGTTGCTGATGCTGCTTGCAATTTTCAATGCATGTTCAATTATCACTAGGTTTACTAGGGTTGCAGAGGAATTATTTGCCATGTTAATTACTGTTCTTTTCATGCAACAGGCTATAGAGGGAATCCTAAGTGAGTTCAAGATACCGAAGGCTGAAAATCCCTTGTTAGAGGAATATAAATTTCATTGGTGCTATACAAATGGATTACTTGCAATCATTTTCTCTTTTGGGTTACTTTTCACTGCCATGGTAAGTAGAAGTGCAAGAAAATGGCGATATTTAACAGGGTGCATACGAGGTGTCATCGCAGATTATGGTGTTCCAATTATGGTAGTATGTTGGACTGCACTATCTTATACCATACCGAGCAAAGTTCCATCTGGTGTTCCTAGAAGGTTGCTTTGTCCACTTCCTTGGGAACCTGAATCTCTCTACCACTGGACTGTAGTTAAGGATATGGGAAAGATACCCTTGCCATACATCTTTGGGGCATTTATTCCAGCAGTTATGATAGCAGGTTTATACTTTTTTGATCATAGTGTAGCTTCCAAGATGGCTCAACAGAAGGAATTCAACCTTCAAAAACCATCTGCTTACCACTATGATGTTTTTCTTCTTGGAATAATGACTCTTATTTGCGGCATTCTTGGTCTCCCTCCAGTAAATGGAGTCCTTCCTCAGTCCCCTATGCATACTAAGAGTTTAGCGACTCTTAGAAGGCAGTTGATCCGAAGGAAGTTGGTTAAGAGTGCCAAGGAATGCATTAAGCAACAAGGAAGCAACTCTGAATTATACGGAAAAATGCGAGCCGTGTTTATAGAAATGGATGCCGCACCTACCGTAAGTATTGTTAAAGAGTTGGAGACTTTGAAGGAGGCTGTAATGAAAACTAACGAAAAAAATGGTACAAACGAAAAATTCGATCCTATTAAACATATAGATGCCTATTTTCCTGTTAGAGTTAATGAGCAAAGAATGAGCAACTTGTTGCAGTCTCTCCTTATCGCTTTATCACTTTTAGCCGTTCCTATCATCAAAAGGATACCTACCTCCGTTCTTTGGGGATATTTTGCTTATATGGCAATTGATAGTCTCCCAGGGAACCAATTTTGGGAAAGGATATTGCTTCTTTTCATCAGCCCCAGAAGGCACTACAAAATTTTGGAAGGCTCTCATGCCTCATTTGTAGAGTCAGTACCATACAAGACAATAGCTACATTTACAGTTTTACAGTTTCTATATTTTGCAATCTGTTATGGATTGACATGGATACCTATTGGTGGAATATTGTTTCCATTACCTTTCTTCCTTCTCATAGCTATAAGAGAGAGATTGCTTCCAAAGTTATTCGATGCAAACTATCTTCAAGAATTAGATGCTTCTGAATATGAGGAAATTATTGGTGCTCCACATAATATACCACTAATGGAAAAAGATGTGCGTACTAGTACCGATAATGATACCTCAGAAGAAGATTATTATGATGCAGAGTTATTGGATGAGATGACAACTAATAGGGGAGAATTGAAATGCAGAACAGTAAACCAAAATGATAGTAGAAGCTAA 1662 0.3851 MYTILYSFCTKRPELGAKLFLAWAGWVCVWTSLLLMLLAIFNACSIITRFTRVAEELFAMLITVLFMQQAIEGILSEFKIPKAENPLLEEYKFHWCYTNGLLAIIFSFGLLFTAMVSRSARKWRYLTGCIRGVIADYGVPIMVVCWTALSYTIPSKVPSGVPRRLLCPLPWEPESLYHWTVVKDMGKIPLPYIFGAFIPAVMIAGLYFFDHSVASKMAQQKEFNLQKPSAYHYDVFLLGIMTLICGILGLPPVNGVLPQSPMHTKSLATLRRQLIRRKLVKSAKECIKQQGSNSELYGKMRAVFIEMDAAPTVSIVKELETLKEAVMKTNEKNGTNEKFDPIKHIDAYFPVRVNEQRMSNLLQSLLIALSLLAVPIIKRIPTSVLWGYFAYMAIDSLPGNQFWERILLLFISPRRHYKILEGSHASFVESVPYKTIATFTVLQFLYFAICYGLTWIPIGGILFPLPFFLLIAIRERLLPKLFDANYLQELDASEYEEIIGAPHNIPLMEKDVRTSTDNDTSEEDYYDAELLDEMTTNRGELKCRTVNQNDSRS* 554
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr1g0200 553 PANTHER BORON TRANSPORTER 6-RELATED 1 552 - -
Mtr1g0200 553 Pfam HCO3- transporter family 98 272 IPR011531 GO:0006820|GO:0016021
Mtr1g0200 553 Pfam HCO3- transporter family 3 80 IPR011531 GO:0006820|GO:0016021
Mtr1g0200 553 Pfam HCO3- transporter family 351 442 IPR011531 GO:0006820|GO:0016021
Mtr1g0200 553 PANTHER ANION EXCHANGE PROTEIN 1 552 IPR003020 GO:0005452|GO:0006820|GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr1g0200 Mtr-Chr1 2274119 2278378 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr1g0200 1 553 Antiporters AT1G15460 66.071 0.0 773
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr1g0200 K24194 - gmx:100808880 832.787
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr1g0200 1 2274119 2278378 Mtr1g0200 1 2274119 2278378 ECH
Mtr3g3942 3 53160067 53164747 Mtr1g0200 1 2274119 2278378 ECH
Mtr1g0200 1 2274119 2278378 Mtr3g3942 3 53160067 53164747 PCT