Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr1g0192 ATGGAGAGTAATGAAGTATCAAGAGTTGATAGCTTAAGAAGAGCAAGTAGTTCTAACATATGGAGGAACAATAGCATGAATGTTTTCTCAACGTCTGAACGTGAAGACGATGAAGAAGCTCTTAAATGGGCTGCTATTGAGAGACTTCCTACATATCTAAGGATTAGGAGAAGTATAATCAATAATGAAGAAGGTGAAGGGAGAGAGATTGATATCAAAAAACTTGGATTAACTGAGAGAAAGGTTTTACTAGAGAGACTTGTGAAAATTGCTGAAGAAGATAACGAAAAGTTCTTGTTGAAACTCAAGGAAAGAATCGAAAGAGTTGGACTTGATATTCCAATAGTTGAAGTGAGATTTGAGCATATAAATGTTGAAGCACAAGTTTATGTTGGAGGAAGAGCTTTGCCTTCATTGCTCAACTTCTATGCTAATGTCTTAGAGGGATTCTTAAATTATCTTCATATCATTCCAAGTCCAAAGAAACCATTACATATCCTTCAAAATGTTAGTGGAATCATAAAGCCTCAAAGGATGACATTACTTTTGGGGCCACCAGGCTCTGGAAAGACCACTTTGCTTTTGGCCTTGGCTGGAAAACTTGCTAAAGATTTAAAACAATCTGGGAGAGTAACATACAACGGGAAAGGACTAGACGAGTTTGTTCCACAAAGAACATCCGCTTATATAAGTCAACATGATAATCACATTGGAGAAATGACCGTAAGAGAAACCCTAGCTTTCTCAGCAAGATGTCAAGGGGTTGGACACAATTATGACATGTTGACTGAACTACTAAGAAGAGAGAAGGAAGCAAAGATTAAACCAGATCCTGATGTTGATGCCTATATGAAGGCAGCAGCACTAGAAGGACAGGAGGCAAGTGTGGTAACTGACTATATTCTCAAGATTTTGGGATTGGAAATATGTGCCGACATTATGGTAGGAGATGGAATGATAAGAGGTATTTCAGGAGGGCAGAAAAAGAGAGTCACAACAGGGGAGATGCTGGTTGGACCAATAAGGGTATTGTTCATGGACGAAATATCAACTGGTTTGGACAGTTCAACAACTTTTCAAATAATCAGCTCAATCAGACAATCAATCCATATTCTAAATGGAACCGCACTTGTGTCTCTGCTACAACCAGCACCAGAAACTTATGAATTATTTGATGATATAATACTGCTCACAGATGGACAAATTGTGTATCAAGGACCAAGAGAAAATGTACTAGAGTTTTTCGAGTCAATGGGATTCAAGTGTCCTGAAAGAAAAGGAGTTGCTGATTTCTTACAAGAAGTTACATCAAGAAAAGATCAATGGCAATATTGGGCAAATAAAGATGAACCTTATAGTTTTGTTACTGTCAAGGATTTTGCCGAAGCATTTCAGATATTTCACATAGGTCAAAAACTTGGAGATGAGCTAGCCAATCCTTTTGACAAGTCGAAATGCCATGCAAGTGTCTTGACCACAAAGAAATACGGTGTTAACAAGAAGGAGCTTCTGAAGGCTTGTGCTAGCAGAGAATTTTTGCTTATGAAGCGAAATTCGTTTGTCCACATTTTCAAAGTCACTCAACTTATTTATTTAGCTATCATGACAACAACATTGTTTCTAAGAACTAAGATGCATAAGGATACTGTAGAGGATGGAGGAGCTTACATGGGAGCACTATTTTTCACAGTCACAGTAGCAATGTTCAATGGAATATCAGAACTAAATATGACACTTATGAAACTTCCTGTCTTTTACAAGCAAAGAGATCTTCTTTTCTATCCTTCATGGGCTTATTCTCTTCCACCATGGATTCTAAAAATACCAATAGCTCTCATTGAAGCCGTCATATGGGAAGCCATCACTTACTATGCTATTGGCTATGATCCAAGTTTTGTAAGGCTTTTAAAACAGTACTTGGTAATCCTGCTCATTAACCAGATGGCTACTTCACTATTTCGGTTGATGGCAGCATTAGGAAGGGATGTTATAGTTGCAAGCACTGTTGGGTCATTTGCATTACTAGTAGTTCTGGTTTTGGGAGGATTTGTGATTTCAAGAGAGGACGTGCACAAATGGTTTCTGTGGGGTTATTGGTCGTCACCATTGATGTATGGACAGAATGCTATAGCTGTGAATGAATTTCTTGGACATAGTTGGAGAAAGGTTACCCATAATTCCAATGAAACATTGGGAGTTTTGGTAATGAAAACTCGCGGTTTTTTCCCACAAGCTTATTGGTATTGGATTGGTGTAGGAGCATTGATTGGTTATGTTTTTCTATTCAACTTTTTGTTCACATTGGCCTTACAATATCTCAACCCTTTCAGAAAGGATCAAGCAGGCCTATCTGAAGAGGAATTGCTTGAGAGAGATGCTTCAACAGCTGTAGAATTTACTCAGTTACCGACTCGAAAGAGAATTTCTGAAACAAAAATAGCAGAAGAAGGACTTATGCCATCGAGATCGTTTTCTGCAAGAGTCAGTAAGGATAAAACTAGTATAAGTGGAAGGAGAGGCATGGTTCTTCCTTTTCAACCTCTATCCCTCACTTTTGATGAAATCAGATACGCTGTAGACATGCCTCAGGAAATGAAAAATCAAGGAGTTTCCGAGGATCGTCTCGAACTTTTGAAGGGTATCAATGGCGCCTTTAGGCCTGGAGTACTAACTGCTTTGATGGGTGTAAGTGGTGCCGGAAAGACTACTCTAATGGATGTTTTAGCTGGAAGGAAAACTGGTGGATATATTGATGGAAACATCACAATATCCGGCTATCCAAAGAATCAAAAAACATTTGCTCGCATATCGGGATATTGCGAGCAATTTGATATCCATTCACCTAATGTTACAGTTTATGAATCTTTGTTATATTCGGCATGGCTTCGTTTACCACCTGAAGTTGATCAAGCTACTAGAAAGATGTTTATTGAGGAAGTTATGGAGCTTGTAGAGCTTAATTCATTAAGAGAAGCACTTGTTGGATTGCCAGGCGAGACTGGACTTTCGACCGAACAACGCAAGAGACTAACGATCGCAGTTGAACTTGTAGCGAATCCATCGATAATATTCATGGATGAGCCAACCTCTGGCCTTGATGCTAGAGCAGCTGCAATTGTAATGAGAACAGTGAGGAACACAGTTGACACAGGACGTACTGTTGTTTGCACAATCCATCAGCCAAGTATTGACATATTCGACGCCTTTGATGAGCTTCTACTTATGAAATTGGGAGGTGAGCAAATATATTCTGGTCCATTAGGCCGCCATTGCGCTCATTTGATTCATTACTTTGAGGCTATTGAAGGAGTTCCTAAGATTAAAGATGGTTATAATCCTGCAACATGGATGTTGGAAGTTACATCAGCAGGATCAGAAGCAAATCTTAAGGTCAACTTCACTAACGTTTACAGAAACTCGGAACTATACCGGAGAAACAAACAATTGATCCAGGAATTAAGTATACCTCCTCAAGATTCAAAGGAATTATACTTTGATTCTCAGTATACACAAACTATGTTGTCCCAATGTAAAGCATGCTTGTGGAAACAACATTTATCGTATTGGCGAAACACGTCATATACAGCAGTTAGACTGTTATTTACAACACTGATAGCTTTCTTGTTTGGAATCATATTTTGGAACATTGGCTTGAAAAGGAGAAAGGAGCAAGATCTTTTCAATGCAATGGGATCGATGTATGCTTCGGTTATATTTATTGGAGTACAAAATGGTGCCTCAGTGCAGCCTGTAATAGCAGTTGAGAGAACAGTCTTCTACAGAGAAAGAGCTGCTGGAATGTATTCCGCTTTGCCTTATGCAGCAGCACAGGTTATTATAGAGCTTCCACACATCTTGGTTCAGACCCTAGTATATGGGATCATTGTATATGCTATGATGGGATTTGAGTGGACAGCATCAAAATTCTTTTGGTATATTTTCTTCAATTACTTCACCTTCTTGTACTACACCTTCTATGGTATGATGACCATGGCCATAACTCCAAATCCACATGTTGCTGCCATACTGTCCTCCTCATTCTATGCAATATGGAACCTTTTCTCAGGCTTTATCATTCCCCTATCTAAAATACCAATATGGTGGAAGTGGTTTTATTGGGTTTGTCCTGTTGCATGGACATTGTATGGATTGGTGACTTCTCAATATGGAGACAACATGCAGAAACTTGAGAATGGTCAAAGGGTTGAAGAATTTGTTAAGAGTTACTTTGGTTTTGAACATGACTTCCTAGGAGTGGTTGCAATTGTTGTGGTTAGTTTCTCAGTGTTCTTTGCACTTATCTTCACCTTTGGTATCAAAGCATTCAACTTCCAAAAAAGATGA 4344 0.3886 MESNEVSRVDSLRRASSSNIWRNNSMNVFSTSEREDDEEALKWAAIERLPTYLRIRRSIINNEEGEGREIDIKKLGLTERKVLLERLVKIAEEDNEKFLLKLKERIERVGLDIPIVEVRFEHINVEAQVYVGGRALPSLLNFYANVLEGFLNYLHIIPSPKKPLHILQNVSGIIKPQRMTLLLGPPGSGKTTLLLALAGKLAKDLKQSGRVTYNGKGLDEFVPQRTSAYISQHDNHIGEMTVRETLAFSARCQGVGHNYDMLTELLRREKEAKIKPDPDVDAYMKAAALEGQEASVVTDYILKILGLEICADIMVGDGMIRGISGGQKKRVTTGEMLVGPIRVLFMDEISTGLDSSTTFQIISSIRQSIHILNGTALVSLLQPAPETYELFDDIILLTDGQIVYQGPRENVLEFFESMGFKCPERKGVADFLQEVTSRKDQWQYWANKDEPYSFVTVKDFAEAFQIFHIGQKLGDELANPFDKSKCHASVLTTKKYGVNKKELLKACASREFLLMKRNSFVHIFKVTQLIYLAIMTTTLFLRTKMHKDTVEDGGAYMGALFFTVTVAMFNGISELNMTLMKLPVFYKQRDLLFYPSWAYSLPPWILKIPIALIEAVIWEAITYYAIGYDPSFVRLLKQYLVILLINQMATSLFRLMAALGRDVIVASTVGSFALLVVLVLGGFVISREDVHKWFLWGYWSSPLMYGQNAIAVNEFLGHSWRKVTHNSNETLGVLVMKTRGFFPQAYWYWIGVGALIGYVFLFNFLFTLALQYLNPFRKDQAGLSEEELLERDASTAVEFTQLPTRKRISETKIAEEGLMPSRSFSARVSKDKTSISGRRGMVLPFQPLSLTFDEIRYAVDMPQEMKNQGVSEDRLELLKGINGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYIDGNITISGYPKNQKTFARISGYCEQFDIHSPNVTVYESLLYSAWLRLPPEVDQATRKMFIEEVMELVELNSLREALVGLPGETGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFDAFDELLLMKLGGEQIYSGPLGRHCAHLIHYFEAIEGVPKIKDGYNPATWMLEVTSAGSEANLKVNFTNVYRNSELYRRNKQLIQELSIPPQDSKELYFDSQYTQTMLSQCKACLWKQHLSYWRNTSYTAVRLLFTTLIAFLFGIIFWNIGLKRRKEQDLFNAMGSMYASVIFIGVQNGASVQPVIAVERTVFYRERAAGMYSALPYAAAQVIIELPHILVQTLVYGIIVYAMMGFEWTASKFFWYIFFNYFTFLYYTFYGMMTMAITPNPHVAAILSSSFYAIWNLFSGFIIPLSKIPIWWKWFYWVCPVAWTLYGLVTSQYGDNMQKLENGQRVEEFVKSYFGFEHDFLGVVAIVVVSFSVFFALIFTFGIKAFNFQKR* 1448
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr1g0192 1447 Pfam Plant PDR ABC transporter associated 720 781 IPR013581 -
Mtr1g0192 1447 Gene3D - 154 458 IPR027417 -
Mtr1g0192 1447 Pfam ABC-transporter N-terminal 72 142 IPR029481 -
Mtr1g0192 1447 Gene3D - 864 1099 IPR027417 -
Mtr1g0192 1447 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 865 1089 IPR027417 -
Mtr1g0192 1447 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 163 424 IPR027417 -
Mtr1g0192 1447 Pfam ABC transporter 167 349 IPR003439 GO:0005524
Mtr1g0192 1447 Pfam ABC transporter 878 1030 IPR003439 GO:0005524
Mtr1g0192 1447 PANTHER ABC-2 AND PLANT PDR ABC-TYPE TRANSPORTER FAMILY PROTEIN 10 1447 - -
Mtr1g0192 1447 PANTHER ATP-BINDING CASSETTE TRANSPORTER 10 1447 - -
Mtr1g0192 1447 SMART AAA_5 887 1079 IPR003593 -
Mtr1g0192 1447 SMART AAA_5 176 401 IPR003593 -
Mtr1g0192 1447 Pfam ABC-2 type transporter 1176 1388 IPR013525 GO:0016020|GO:0140359
Mtr1g0192 1447 Pfam ABC-2 type transporter 503 715 IPR013525 GO:0016020|GO:0140359
Mtr1g0192 1447 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 850 1102 IPR003439 GO:0005524
Mtr1g0192 1447 Pfam ABC-2 type transporter 382 433 IPR043926 GO:0140359
Mtr1g0192 1447 CDD ABCG_PDR_domain2 847 1085 IPR034003 -
Mtr1g0192 1447 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 151 424 IPR003439 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr1g0192 Mtr-Chr1 2199677 2209270 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr1g0192 888 1062 Calmodulin-binding Proteins AT2G36910 26.630 2.56e-06 50.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr1g0192 K08711 - gmx:100810505 2529.59
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr1g0192 1 2199677 2209270 Mtr1g0192 1 2199677 2209270 ECH
Mtr1g0192 1 2199677 2209270 Mtr3g3950 3 53223044 53230706 PCT