Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr1g0183 ATGAGGGAGAGCAAAATGGACAAAGAAAATGGTGTGAATGTGAGGGTGACTCGAGCAAGGGCAAGAGCTTTGAAGGAGCCTTCAAGAAATGAACAAGCTGTTGTTGTTGGACTCAAAGATGTGACCAACATTTCTGCAAAATCACATAAGCGTACTCATACATCAAATTTTCAGAAGAAAGAAGGTTCTAAGAAGAGAAAGACCAATGTAGCTTCAGAAGATGATGTCTCCTTGCAAGTTTGGACAATCAAAGAGGATGCAAAGAAAGAGTTAGCTAAAGATTCTTCAACATCAACAATGACAAAGAAAGAGTCCCTGCAAGTGCAGCCTTCTGTGGAAAATTCCCTGCTTTCAATGCAGGACACACTAAACTCTCCAAATACAGAGATAAATTTGATATGTGAGAAACTAAGTGCCTCAGTTGGGTTGGGAATTGTGGACATTGATTCAAAGTTAAGGGATTCTCCTATTTGGACTTCATATGCCCCTGATATATACACTAATATTCATGTCAGAGAGTGTGAAAGGAGGCCATTAGCCAATTACATGGAAACTTTGCAGCAAGACATCACTCCCGGCATGAGGGGAATTCTGGTTGACTGGCTTGTGGAGGTTGCTGATGAGTTTAAACTAGTTCCAGACACACTTTACCTTGCTGTGAATCTCATTGATCGATTCCTTTCCCAACGTTTGATTACCAAACGAAGGCTGCAGTTGCTTGGTATTACTTGCATGCTGATTTCATCTAAGTATGAAGAGATTTGTGCTCCTGGAGTTGAAGACTTTTGCGTCATCACAGATAATACATACTCCAGACAAGAGGTATTGAAAATGGAGAAAGAGGTTCTAAATCTTCTGCATTTTCAATTAGCTGTTCCCACAATCAAGACATTTCTCAGGAGGTTTATCCAAGTAGCACAAACTTCTTCCAAGGTTGCTCAAGCTGACCTGGAATTTCTGGCAAACTATTTAGCAGAGCTAGCACTTGTTGAATACAGCTTCTTGCAGTTTCAACCTTCCAAGATAGCTGCATCTTCTGTGTTACTTGCAAGATGGACCCTCAACCAGTCAGAGCATCCATGGAATCCAACTCTGGAACACTATACAAATTACAAAGCATCAGAGCTGAAAACTACTGTCCTTGAACTAATAGATTTGCAACTTAACACCAAACGCTGTCGTCTCAATGCAGTACGTGAAAAATATCAACATCAGAAGTTCAATAGTGTGGCGAATTTGTCTCCGAAACCGGTGGAATATCTTTTCTAG 1269 0.4066 MRESKMDKENGVNVRVTRARARALKEPSRNEQAVVVGLKDVTNISAKSHKRTHTSNFQKKEGSKKRKTNVASEDDVSLQVWTIKEDAKKELAKDSSTSTMTKKESLQVQPSVENSLLSMQDTLNSPNTEINLICEKLSASVGLGIVDIDSKLRDSPIWTSYAPDIYTNIHVRECERRPLANYMETLQQDITPGMRGILVDWLVEVADEFKLVPDTLYLAVNLIDRFLSQRLITKRRLQLLGITCMLISSKYEEICAPGVEDFCVITDNTYSRQEVLKMEKEVLNLLHFQLAVPTIKTFLRRFIQVAQTSSKVAQADLEFLANYLAELALVEYSFLQFQPSKIAASSVLLARWTLNQSEHPWNPTLEHYTNYKASELKTTVLELIDLQLNTKRCRLNAVREKYQHQKFNSVANLSPKPVEYLF* 423
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr1g0183 422 SUPERFAMILY Cyclin-like 292 415 IPR036915 -
Mtr1g0183 422 SUPERFAMILY Cyclin-like 156 290 IPR036915 -
Mtr1g0183 422 Pfam Cyclin, C-terminal domain 293 415 IPR004367 -
Mtr1g0183 422 SMART Cyclin_C_2 293 416 IPR004367 -
Mtr1g0183 422 MobiDBLite consensus disorder prediction 55 71 - -
Mtr1g0183 422 MobiDBLite consensus disorder prediction 43 71 - -
Mtr1g0183 422 PANTHER CYCLIN-A2-4 32 422 - -
Mtr1g0183 422 PANTHER CYCLINS 32 422 IPR039361 -
Mtr1g0183 422 Gene3D - 178 291 - -
Mtr1g0183 422 SMART cyclin_7 200 284 IPR013763 -
Mtr1g0183 422 SMART cyclin_7 297 385 IPR013763 -
Mtr1g0183 422 ProSitePatterns Cyclins signature. 195 226 IPR006671 -
Mtr1g0183 422 PIRSF Cyclin_A_B_D_E 1 420 IPR039361 -
Mtr1g0183 422 CDD CYCLIN 292 383 IPR013763 -
Mtr1g0183 422 Gene3D - 164 412 - -
Mtr1g0183 422 CDD CYCLIN 194 283 IPR013763 -
Mtr1g0183 422 MobiDBLite consensus disorder prediction 89 110 - -
Mtr1g0183 422 Pfam Cyclin, N-terminal domain 164 290 IPR006671 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr1g0183 Mtr-Chr1 2075313 2080602 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr1g0183 13 422 Core Cell Cycle Gene Families AT5G25380 49.409 3.48e-125 368
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr1g0183 K06627 - gmx:100777132 495.738
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr1g0183 1 2075313 2080602 Mtr3g3961 3 53342260 53347830 PCT