Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr1g0173 ATGAAAGTGATAAAGATGAAGCATGTGTATGTGTTAGCCATGGTGGTAGTACTGGTAGGAACAACAGTTGCAGCTGATTCAGCAACAAATACTTGCAGTCACACTTGTGGAGGTCAAGAAATTCCATATCCATTTGGCATAGATGACAACAACACCTCATCAGAGTGTTTCTTGGGTCGTAGATTAATTCCGCTCACTTGCAATGAATCCAAAATATACGCCGGTGACATGGAAGTGTTAAACATAGACATCTTCAATGCTCAAATCGAAGCGTCATTTTACGTCTCTAAATATTGCGGTGTTCATAATTATAATAAACCTAGGCTTAACAGTGGTTCATATATCATTTCAAGCAAAGAAAACAAATTTATAACTGTTGGTATTAACAGTTTCGGTTATTTTAATAGTTACCGTGGTGGTGAAAACAAGTATTCAACTGGGTGTTTAACAAGATCTTTTGGTCTTCCAAGATTGATTGATAATGAAACATGTTCGGGTATAGGGTGCTGCCAAGTTGATATTCCTCCTAAAATGTGGAATATAAGCATAGAAGCTTATAATTTCAACCAAAATTCATCACTATATTGTAGCTATGCATTTGTTGTCAAGAATGGTAGCTATACTTTTTCTACCAATCATTTATCACCAAAAGGTTTTCGTTACGAGGAATTACCTGTGGTTCTTGACTGGACCATTGGTGAGGAAAACTGCAGTACAGCTTCTTCCAAGAAGAATGGAGTCAACTATGGGTGCAAGAACAATAGTCATTGTGATGACAAGGACACATATTTTGGTTACCGATGCCATTGCAATCAAGGTTTTGAAGGAAATCCTTATCATCCCAATGGCTGCACAGACATTAACGAATGTGAAAAAGACCTATTACATGATTGCAAAACTAAAGCATATTGTAACAACACCGATGGGAAATACAATTGTTTCTGTCCAAAGGGGTATTCCGGGAATGGAACAAAGGAAGTAGGGTGCCAACTTGATGATGAAAATGCAAATTCAATAGTACTACTGATTGTCCTTGGAGTAGGAATAACATTTATTCTTCTCTTTTTGGGAACATTCTCGTACTTAATGTACCATAAGAGGAAATTCATCAAAATGAAAGAGAAATTCTTCGAACAGAATGGTGGTTTGATTTTGAAACAAAAACTCTCAACAAGAGAAGACTCCTCCTCTCAAACAAGACAAGACTCCTCAACTCAAAGTGCTAAAATATTCACACAAGATCAGCTAAACAAGGCAACCAAAAACTTCGACGAGAATTTAATCATTGGCAAAGGTGGTTTTGGTACCGTTTTCAAAGGACTTCTAGATGATAAAAGAATCGTTGCTATCAAAAAATCAAAAATAATAGATAGAAGCCAAATCGATCAATTCATTAATGAGGTGGTTGTTCTCTCTCAAATAAATCATAGGAATGTTGTCAAACTCTTGGGGTGTTGTTTAGAGACAGAAGTTCCTTTGTTGGTTTATGAATTTGTTACCAATGGCACCCTTTCTGGTTTTATACACACACAAAGTAATAAGGTGAATAATGAAACATGGAAAACTCGTCTTAAGATAGCCGCAGAGGTAGCTGAAGCTTTGTCATATCTACATTCATATGCCTCAATACCCATCATCCATAGAGATGTCAAGAGTGATAACATTCTCTTAGATAGAACCAACACCGCCAAAGTATCGGATTTTGGAGCTTCAAGATTGGTTCCACTTGATCAAACTGAAATAGCCACAATGGTGCAAGGAACTATTGGCTACTTAGATCCAGAGTATATGCAAACAAGTCAATTAACTGAAAAAAGTGATGTCTATAGCTTTGGAGTAGTTCTTGTAGAGTTGCTGACGGGGGAGAAACCTTTTTGTTTTGGTAGGCCGGAAGAGAGAAGAAGTCTTGCCATGCATTTCCTATCTTGTTTGAAAAACGATAATGTGTTTGAAGTTATTCAAGATGGTTTGTGGAATGAAGAAAACAAACAAGAGATCAAGGAGGTGGCTGTTCTTGCGGCGAAGTGTTTGAGACTTAGAGGGGAAGAAAGACCAAGCATGAAGGAAGTGGCTATGGAATTGGAGGGAATGAGGTTAATGAATAAGCACTCTTGGATCAATGATGACTCAAATGTAGAGGAGAGTCGGTTCTTGCTTCATGAATCATCATCTAGCTTTTATGAACCTGGTGATAGCATCACACATGGAGATATCGGATATGACAGCTTGAAAGACCATGTACTGATAGCATTGGATGATGGCAGATGA 2268 0.3761 MKVIKMKHVYVLAMVVVLVGTTVAADSATNTCSHTCGGQEIPYPFGIDDNNTSSECFLGRRLIPLTCNESKIYAGDMEVLNIDIFNAQIEASFYVSKYCGVHNYNKPRLNSGSYIISSKENKFITVGINSFGYFNSYRGGENKYSTGCLTRSFGLPRLIDNETCSGIGCCQVDIPPKMWNISIEAYNFNQNSSLYCSYAFVVKNGSYTFSTNHLSPKGFRYEELPVVLDWTIGEENCSTASSKKNGVNYGCKNNSHCDDKDTYFGYRCHCNQGFEGNPYHPNGCTDINECEKDLLHDCKTKAYCNNTDGKYNCFCPKGYSGNGTKEVGCQLDDENANSIVLLIVLGVGITFILLFLGTFSYLMYHKRKFIKMKEKFFEQNGGLILKQKLSTREDSSSQTRQDSSTQSAKIFTQDQLNKATKNFDENLIIGKGGFGTVFKGLLDDKRIVAIKKSKIIDRSQIDQFINEVVVLSQINHRNVVKLLGCCLETEVPLLVYEFVTNGTLSGFIHTQSNKVNNETWKTRLKIAAEVAEALSYLHSYASIPIIHRDVKSDNILLDRTNTAKVSDFGASRLVPLDQTEIATMVQGTIGYLDPEYMQTSQLTEKSDVYSFGVVLVELLTGEKPFCFGRPEERRSLAMHFLSCLKNDNVFEVIQDGLWNEENKQEIKEVAVLAAKCLRLRGEERPSMKEVAMELEGMRLMNKHSWINDDSNVEESRFLLHESSSSFYEPGDSITHGDIGYDSLKDHVLIALDDGR* 756
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr1g0173 755 Pfam Protein tyrosine and serine/threonine kinase 428 694 IPR001245 GO:0004672|GO:0006468
Mtr1g0173 755 SUPERFAMILY EGF/Laminin 285 324 - -
Mtr1g0173 755 Pfam Wall-associated kinase 161 271 IPR013695 GO:0004674|GO:0016021
Mtr1g0173 755 ProSitePatterns Protein kinases ATP-binding region signature. 429 452 IPR017441 GO:0005524
Mtr1g0173 755 Gene3D Plasmodium vivax P25 domain 227 336 - -
Mtr1g0173 755 Gene3D Transferase(Phosphotransferase) domain 1 499 712 - -
Mtr1g0173 755 ProSiteProfiles Protein kinase domain profile. 423 706 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr1g0173 755 ProSitePatterns Serine/Threonine protein kinases active-site signature. 545 557 IPR008271 GO:0004672|GO:0006468
Mtr1g0173 755 Pfam Calcium-binding EGF domain 286 329 IPR001881 GO:0005509
Mtr1g0173 755 ProSitePatterns Calcium-binding EGF-like domain signature. 286 313 IPR018097 GO:0005509
Mtr1g0173 755 PANTHER WALL-ASSOCIATED RECEPTOR KINASE 2-LIKE ISOFORM X2 19 724 - -
Mtr1g0173 755 Gene3D Phosphorylase Kinase; domain 1 384 498 - -
Mtr1g0173 755 PANTHER WALL-ASSOCIATED RECEPTOR KINASE-LIKE 21 19 724 IPR045274 GO:0007166
Mtr1g0173 755 CDD STKc_IRAK 429 697 - -
Mtr1g0173 755 ProSitePatterns Aspartic acid and asparagine hydroxylation site. 304 315 IPR000152 -
Mtr1g0173 755 SMART serkin_6 423 706 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr1g0173 755 SUPERFAMILY Protein kinase-like (PK-like) 398 695 IPR011009 -
Mtr1g0173 755 SMART egfca_6 286 330 IPR001881 GO:0005509
Mtr1g0173 755 ProSiteProfiles EGF-like domain profile. 286 330 IPR000742 -
Mtr1g0173 755 Pfam Wall-associated receptor kinase galacturonan-binding 32 89 IPR025287 GO:0030247
Mtr1g0173 755 SMART egf_5 236 285 IPR000742 -
Mtr1g0173 755 SMART egf_5 289 330 IPR000742 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr1g0173 Mtr-Chr1 1914704 1918519 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr1g0173 4 755 Receptor kinase-like Gene Family AT1G21230 42.968 0.0 552
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_WAK Mtr1g0173 PK_Tyr_Ser-Thr 3.3e-52 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr1g0173 - - mtr:MTR_1g010260 1465.67