Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr1g0172 ATGAAGGTCCTGCAAGTATTAATAATACTTGCTGCATTAGCACATTTGATAGAAGCAGTTGCATTTACACTTGCATCTGATCAACCTAAACAAGTCCTACCAGGCTGCAATTACACCTGTGGAGGTGTAAAAGTTCCATATCCATTTGGCATAGGAAATTCAACAGCACAAGATCATACACCATGTTACATAAATTCCAAATTTATGCTCACTTGTACAGACAATTCCAAATTAATTTATGGTAAGAATATACAAGTCCTAGACATAAATCCCCAAGGTCAAATGGAAATGAGATTTTTCGTCTCACATCTCTGTACGAATAGTAGTAGTAATAGTAATAATAATACCGAAAAAGCAAATAAACCTTCTCTCAGAGTTTCTTCCCTCGCAATTTCAAGCACAGACAACAAATTCATAACAGTTGGTTGTGACAGTTTCGGATATCTCAACAGTAATTTCAAGGGTGCCACTTATTCTACAGGATGCTTAACAAGATGTTATGATTTTGATACTAAAATGGTAATTGGAAATAACACTGGAAAGTGCACAGGTTTAGGTTGTTGTGAAGTTGATATTCCTCCACTTATGAAAAATATCACCATACAAGCATTTAAATTCTCACCTTCTACACTATCTATGGAAAATTCTTGTAGCTATTCCTTTATTGCAAAACAAGGATCCTATAATTTTTCTGTAGAACATATTAAGAAACTGCCTTATAACACTTTCCCTATGGTTGTTAATTGGGTTGTTACAAATGAATCATGTCGAATAGCCCAAACTACAAATAGCTATGCCTGCAAGGAAAATAGTGAATGTGTTGATAAAGATTCAGATTATGACGGTTACAGATGCAAGTGTTTGGCAGGTTTTGAAGGAAATCCATACGTTCCCGGAGGCTGTAGAGACATTAATGAATGTGCGACATCAAATCATACATGCCTAAGTGAAGCAAATTGTAATAACACTGTTGGGAGTTACAATTGTTTCTGTCCGAACTCGCAATTTGGAAATGGAACAAGTTTAGGAGGATGCAAACTACCTGATCGAAATACATATCAAATAGTACCAACAACTGTCCTTGGAGTAGGAGCAGTATTTATTGTTCTATTTCTGTGCATAATTTCCTACTTAATTTACCAAAAAAGGAAACTTGTCAAATTGAAAGAGAAATTCTTTAGGCAGAATGGAGGTTCTATTTTGGAACATAAACTTCGTCAAAGGAAAGACTCGTCTCAAATAACTCACATTTTCGAAGAAAATGAACTAAGGAAAGCCACTAACAAATTTGATGAGAGCTTAATCATAGGTAAAGGAGGTTTTGGTACAGTTTACAAAGGGGAACTTGATGATAATAGAATTGTTGCTATCAAAAAGTCTAAAACAATAGACAAAAGCCAAATTGAACAATTCATTAATGAGGTGGATGTTGTCTCTCAAATAAATCACAGAAATGTGGTCAAACTCTTAGGGTGTTGTCTAGAAACAGAAGTTCCTTTGTTGGTTTATGAGTTTGTTAGCAATGGTACTCTTTCTGAATTTATTCACACAAAAGGTAAGACGAATGATCCAACTTGGAAGACTCGTCTTAAGATAGCCGCAGAGGTAGCTGAGGCTCTGTCATATCTACATTCATATGCCTCAACACCCATCATCCATAGAGATGTCAAGAGTGATAACATTCTCTTAGATGGAACCAACACCGCCAAAGTGTCGGATTTTGGAGCTTCAAGATTGGTTCCACTTGATCAAACTGAAATAGCCACAATGGTGCAAGGAACTATTGGCTACTTAGATCCAGAGTATATGCAAACAAGTCAATTAACTGAAAAAAGTGATGTCTATAGCTTTGGAGTAGTTCTTGTGGAGTTGCTGACGGGGGAGAAACCTTTTTGTTTTGGTAGGCCGGAAGAAAGAAGAAGTCTTGCTATGCATTTTCTATCTTGCTTGAAAAAGGATAATGTATTTGAAGTTATTCAAGATGGTTTGTGGAATGAAGAAAACAAACAAGAGATCAAGGAGGTGGCTGTTCTTGCGGCGAAGTGTTTGAGACTTAGAGGGGAAGAAAGACCAAGCATGAAGGAAGTGGCTATGGAATTGGAGGGAATGAGGTTAATGAATAAGCACTCTTGGATCAATGATGACTCAAATGTAGAGGAGAGTAGGTACTTGCTTCATGAATCATCATCTAGCCTTTATGAACCTGGTGATAGCAGCAAACATGGAGATATCGGATATGACAGCTTGAAAGATCACGTACTGATAACATTGGATGATGGCAGATGA 2286 0.3679 MKVLQVLIILAALAHLIEAVAFTLASDQPKQVLPGCNYTCGGVKVPYPFGIGNSTAQDHTPCYINSKFMLTCTDNSKLIYGKNIQVLDINPQGQMEMRFFVSHLCTNSSSNSNNNTEKANKPSLRVSSLAISSTDNKFITVGCDSFGYLNSNFKGATYSTGCLTRCYDFDTKMVIGNNTGKCTGLGCCEVDIPPLMKNITIQAFKFSPSTLSMENSCSYSFIAKQGSYNFSVEHIKKLPYNTFPMVVNWVVTNESCRIAQTTNSYACKENSECVDKDSDYDGYRCKCLAGFEGNPYVPGGCRDINECATSNHTCLSEANCNNTVGSYNCFCPNSQFGNGTSLGGCKLPDRNTYQIVPTTVLGVGAVFIVLFLCIISYLIYQKRKLVKLKEKFFRQNGGSILEHKLRQRKDSSQITHIFEENELRKATNKFDESLIIGKGGFGTVYKGELDDNRIVAIKKSKTIDKSQIEQFINEVDVVSQINHRNVVKLLGCCLETEVPLLVYEFVSNGTLSEFIHTKGKTNDPTWKTRLKIAAEVAEALSYLHSYASTPIIHRDVKSDNILLDGTNTAKVSDFGASRLVPLDQTEIATMVQGTIGYLDPEYMQTSQLTEKSDVYSFGVVLVELLTGEKPFCFGRPEERRSLAMHFLSCLKKDNVFEVIQDGLWNEENKQEIKEVAVLAAKCLRLRGEERPSMKEVAMELEGMRLMNKHSWINDDSNVEESRYLLHESSSSLYEPGDSSKHGDIGYDSLKDHVLITLDDGR* 762
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr1g0172 761 ProSiteProfiles Protein kinase domain profile. 430 712 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr1g0172 761 SMART egfca_6 303 346 IPR001881 GO:0005509
Mtr1g0172 761 ProSitePatterns Aspartic acid and asparagine hydroxylation site. 320 331 IPR000152 -
Mtr1g0172 761 SMART egf_5 306 346 IPR000742 -
Mtr1g0172 761 SMART egf_5 255 302 IPR000742 -
Mtr1g0172 761 PANTHER WALL-ASSOCIATED RECEPTOR KINASE-LIKE 21 24 730 IPR045274 GO:0007166
Mtr1g0172 761 PANTHER WALL-ASSOCIATED RECEPTOR KINASE 2-LIKE ISOFORM X2 24 730 - -
Mtr1g0172 761 ProSiteProfiles EGF-like domain profile. 303 341 IPR000742 -
Mtr1g0172 761 SUPERFAMILY EGF/Laminin 303 338 - -
Mtr1g0172 761 ProSitePatterns Calcium-binding EGF-like domain signature. 303 329 IPR018097 GO:0005509
Mtr1g0172 761 CDD EGF_CA 303 332 - -
Mtr1g0172 761 Gene3D Phosphorylase Kinase; domain 1 395 505 - -
Mtr1g0172 761 Gene3D Transferase(Phosphotransferase) domain 1 506 725 - -
Mtr1g0172 761 Pfam Protein tyrosine and serine/threonine kinase 435 700 IPR001245 GO:0004672|GO:0006468
Mtr1g0172 761 ProSitePatterns Protein kinases ATP-binding region signature. 436 459 IPR017441 GO:0005524
Mtr1g0172 761 Pfam Wall-associated receptor kinase galacturonan-binding 36 94 IPR025287 GO:0030247
Mtr1g0172 761 ProSitePatterns Serine/Threonine protein kinases active-site signature. 551 563 IPR008271 GO:0004672|GO:0006468
Mtr1g0172 761 SMART serkin_6 430 712 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr1g0172 761 Pfam Calcium-binding EGF domain 303 334 IPR001881 GO:0005509
Mtr1g0172 761 SUPERFAMILY Protein kinase-like (PK-like) 412 701 IPR011009 -
Mtr1g0172 761 CDD STKc_IRAK 436 703 - -
Mtr1g0172 761 Gene3D Laminin 254 341 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr1g0172 Mtr-Chr1 1904078 1906942 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr1g0172 16 761 Receptor kinase-like Gene Family AT1G21230 45.789 0.0 586
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_WAK Mtr1g0172 PK_Tyr_Ser-Thr 2.3e-53 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr1g0172 - - gmx:106795446 915.605