Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr1g0171 ATGGAAGTGTTAAACATAAACATCTCCACAGCTGAAATGGACGTGTTATTTGACGTCTCTAAGTACTGCAGTGTTGATAATTATACTAAACCTACGCTTACTAGTGATTCATATGTCTTTTCAAGCAAAGAAAACAAATTTGTAACCGTTGGTTATGACAGTTACGGTTATTTTAATAGTTACGATGGTGAAAACGAGCATTCAACAACAGGGTGCTTAACAAGCGTTATTGGTCATGAAAGATTGATTAATAATGGAACATGTTCGGGTATAGGGTGTTGCCAAGTTGATATTCCTCCTAGAATGAGATATATAAGTATACAAGCTACTAATTTCAACAAAAACTCATCCGATTTTTGTAGCTATGCATTTGTTGCTAAGAATGGTAGCTATAGTTTTTCATCCACTCATTTATCACAAGGTTTACCTTTCAACCGATCACCTGTGGTTCTTGACTGGACCATTGAGGACAACAACTGCAGTACAGCTCCCTCCAATAATATGGGAATCTTCAATTACTATGGGTGCAAGAACAATAGCTATTGTGATGACAAGGATAAAGATTTTGGTTACCGATGCATTTGTAATCAAGGTTTTGAAGGAAATCCTTATGAACCCAATATTGGCTGCACAGACACTGACGAATGTGAAAAAAACAAACATGGTTGCAAAACTAAAGCAAATTGTAAAAACACCATTGGAAATTACACATGTTTCTGTCCCCGGGGGCAATCTGGAGATGGAACAAAGGAAAGAGGGTGCCAGACAAAAGCAACTCCAATATTACCACTCACTGTTATTGGAGTAGGAGCAACGCTTATTCTTCTTTTGGTTGGGACATTCTCGTACTTAATATACCATAAAAGGAAATTCATCAAAATGAAAGAGAAATTCTTTGAGCAGAATGGTGGTCTGATTTTAAAACAAAAACTCTCAACAAGAGAAGACTCCTCAACTGAAAGCACTAAAATATTCACACAAGATCAGCTAAACAAGGCCACCAAAGACTTTGACGAGAATTTAATCATTGGCAAAGGTGGTTTTGGTACTGTTTACAAAGGATTTCTAGATGATAAAAGAATCGTTGCTATCAAAAAATCAAAAATAATAGATAGAAGCCAAATCAATCAATTCATTAATGAGGTAATTATTCTCTCTCAAATAAATCATAGGAATGTTGTCAAACTCTTGGGGTGTTGTTTAGAGACAGAAGTTCCTTTGTTGGTTTATGAATTTGTTACCAATGGCACCCTTTCTGGTTTTATACACACACAAAGTAATAAGGTGAATAATGAAACATGGAAAACTCGTCTTAAGATAGCCGCAGAGGTAGCTGAATCTTTGTCATATCTACATTCATATGCCTCAATACCTATTATCCATAGAGATGTCAAGTGTGATAACATTCTCTTAGATGGAACCAACACTGCCAAAGTGTCAGATTTTGGAGCTTCAAGATTGGTTCCAATTGATCAAACTGAAGTAGCCACAATGGTGCAAGGAACTATTGGCTACTTAGATCCAGAGTATATGCAAACAAGTCAATTAACTGAAAAAAGTGATGTCTATAGCTTTGGAGTAGTTCTTGTAGAGTTGCTAACGGGGGAGAAACCTTTTTGTTTTGGTAGGCCGGAAGAGAGAAGAAGTCTTGCTATGTATTTTCTATCTTGCTTGAAAAAGGATAATGTGTTTGAAGTTATTCAAGATGGTTTGTGGAATGAAGAAAACAAACAAGAGATCAAGGAGGTGGCTGTTCTTGCGGCGAAGTGTTTGAGACTTAGAGGGGAAGAAAGACCAAGCATGAAGGAAGTGGCTATGGAATTGGAGGGAATGAGGTTAATGAATAAGCACTCTTGGATCAACGATGACTCAAATGTAGAGGAGAGTAGGTACTTGCTTCATGAATCATCATCTAGCCTTTATGAACCTGGTGATAGCATCACACATGGAGATATCGGATATGACAGCTTGAAAGACCATGTACTGATAGCATTGGATGATGGCAGATGA 2010 0.3716 MEVLNINISTAEMDVLFDVSKYCSVDNYTKPTLTSDSYVFSSKENKFVTVGYDSYGYFNSYDGENEHSTTGCLTSVIGHERLINNGTCSGIGCCQVDIPPRMRYISIQATNFNKNSSDFCSYAFVAKNGSYSFSSTHLSQGLPFNRSPVVLDWTIEDNNCSTAPSNNMGIFNYYGCKNNSYCDDKDKDFGYRCICNQGFEGNPYEPNIGCTDTDECEKNKHGCKTKANCKNTIGNYTCFCPRGQSGDGTKERGCQTKATPILPLTVIGVGATLILLLVGTFSYLIYHKRKFIKMKEKFFEQNGGLILKQKLSTREDSSTESTKIFTQDQLNKATKDFDENLIIGKGGFGTVYKGFLDDKRIVAIKKSKIIDRSQINQFINEVIILSQINHRNVVKLLGCCLETEVPLLVYEFVTNGTLSGFIHTQSNKVNNETWKTRLKIAAEVAESLSYLHSYASIPIIHRDVKCDNILLDGTNTAKVSDFGASRLVPIDQTEVATMVQGTIGYLDPEYMQTSQLTEKSDVYSFGVVLVELLTGEKPFCFGRPEERRSLAMYFLSCLKKDNVFEVIQDGLWNEENKQEIKEVAVLAAKCLRLRGEERPSMKEVAMELEGMRLMNKHSWINDDSNVEESRYLLHESSSSLYEPGDSITHGDIGYDSLKDHVLIALDDGR* 670
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr1g0171 669 Pfam EGF domain 216 249 IPR024731 -
Mtr1g0171 669 PANTHER WALL-ASSOCIATED RECEPTOR KINASE-LIKE 21 34 638 IPR045274 GO:0007166
Mtr1g0171 669 SMART egf_5 215 255 IPR000742 -
Mtr1g0171 669 SMART egf_5 159 211 IPR000742 -
Mtr1g0171 669 CDD STKc_IRAK 343 611 - -
Mtr1g0171 669 PANTHER WALL-ASSOCIATED RECEPTOR KINASE 2-LIKE ISOFORM X2 34 638 - -
Mtr1g0171 669 ProSiteProfiles EGF-like domain profile. 212 255 IPR000742 -
Mtr1g0171 669 ProSitePatterns Protein kinases ATP-binding region signature. 343 366 IPR017441 GO:0005524
Mtr1g0171 669 ProSitePatterns Aspartic acid and asparagine hydroxylation site. 229 240 IPR000152 -
Mtr1g0171 669 Gene3D Phosphorylase Kinase; domain 1 303 412 - -
Mtr1g0171 669 Gene3D Transferase(Phosphotransferase) domain 1 413 626 - -
Mtr1g0171 669 SMART serkin_6 337 620 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr1g0171 669 ProSitePatterns Calcium-binding EGF-like domain signature. 212 238 IPR018097 GO:0005509
Mtr1g0171 669 ProSiteProfiles Protein kinase domain profile. 337 620 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr1g0171 669 Pfam Wall-associated kinase 86 196 IPR013695 GO:0004674|GO:0016021
Mtr1g0171 669 SUPERFAMILY Protein kinase-like (PK-like) 319 609 IPR011009 -
Mtr1g0171 669 Gene3D Laminin 156 254 - -
Mtr1g0171 669 Pfam Protein tyrosine and serine/threonine kinase 342 608 IPR001245 GO:0004672|GO:0006468
Mtr1g0171 669 SMART egfca_6 212 255 IPR001881 GO:0005509
Mtr1g0171 669 SUPERFAMILY EGF/Laminin 211 249 - -
Mtr1g0171 669 ProSitePatterns Serine/Threonine protein kinases active-site signature. 459 471 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr1g0171 Mtr-Chr1 1888729 1892988 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr1g0171 1 669 Receptor kinase-like Gene Family AT1G21230 44.978 1.94e-179 526
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_WAK Mtr1g0171 PK_Tyr_Ser-Thr 6e-52 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr1g0171 - - mtr:MTR_1g010240 1137.87