Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr1g0170 ATGCCACAAGACACTAAAAAGGCCTATCATTTTTCTTCTACTAAATTTGTGATTCAATTCAAGGCAATGCATCCATTGATAATGGTTTCATTAGCACTTTTGATAGAAACAGTTGCATCTGATCAACCTAAACAAGTCCTACCAGGCTGCAATTACACCTGTGGAGATTTAACAATTCCATATCCATTTGGCATAGGAAATTCAACAGCACAACATCATACACCATGTTACATGGATTCAAAATTTGAACTCACCTGTGTAAACAACTCAAAATTAATTCGGCCTAGGGGTATCGAAGTCCTGGACATAAATCCCCAAGGTCAAGTGGAAATGAAATTTTCAGTCTCACATCTTTGTTCGAATGGTAGTAGTAGTAGTAATAATACTGAAGAAGCAAATAGAGCTTATCTCATAGTTTCTCCTCACACAATTTCAAGTACGGAAAACAAATTCATAACCGTTGGTTGCGACAGTTACGGATATCTCAACAGTAATTTCACAGGTGGCACTTATTCAACAGGGTGCTTAACAAGATGTTATGATTTTAAACCTAAAATAGTAATTGGGAATAACACTGGAAAATGCACAGGTTTAGGGTGTTGCCAAGTGGATATTCCTTCTAGTATGAAAAATATCACAATTGAAGCATTTAAATTCCCAACTTCTACCCTATCTAAGGAAAATTCTTGTAGCTATTCCTTTATTGCAAAACAAGGATCCTATAAATTTTCTGTAGACCATATAAATAATCTACCTAATGAAACTTTCCCCTTGGTTATTAATTGGGCTATTACAAATGAATCATGTCAAATAGCTCACACTACAAATAGCTACGCCTGCAAGAAAAATAGTGAATGTGTCGATGACGATCCAGATTATGATGGTTACAGATGCAAGTGTTTACAAGGTTTTGAAGGAAATCCATACCTTCCTGGAGGCTGCACAGACATTGACGAATGTGCAACAAAAACTCATGTATGCAAAAATAAAGCAAATTGTAATAACACTTTGGGGAGTCACACTTGTTTTTGTCCCAAGGGGCAAACCGGAAATGGAACAAAGGAAGGAGGGTGCCAGAAAGTTCATCTAAATGCAACTCGAATAGTACTTCCTACTGTCCTTGGAGCAGGAGCATTATTTATGATTTTCTTCTTAATATACCAAAGAAGGAAATTTATCAAATTGAAAGAGAAGTTCTTTAGGCAGAATGGAGGTTCTATTTTGGAACAAAAACTTCTTCAAAGAAAAGACTCGTCTCAAATAGCTCACATTTTCAAAGAAAATGAACTAAGGAAAGCTACTAACAACTTTGATGAGAGCTTAATCATAGGTAGAGGAGGTTTTGGTACAGTTTTCAAAGGGGAACTTGATGATAATAGAATTGTGGCTATCAAAAAGTCCAAAACAATAGACGAAAGCCAAATTGAACAATTCATTAACGAGGTGGATGTTGTCTCTCAAATAAATCACAGGAATGTGGTCAAACTCTTGGGGTGTTGTCTAGAAACAGAAGTTCCTTTGTTGGTTTATGAGTTTGTTAGCAATGGTACTCTTTCTGAATTTCTTCGCACACAAGGTAAGACGAACGATCTTACTTGGAAAACTCGTCTTAGGATAGCTGTTGAGGTAGCTGGAGCTCTGTCATATCTGCATTCAGCTGCCTCAATACCCATTATCCATAGAGATGTCAAGAGTGCTAACATTCTCTTAGATGGAACCAACACCGCTAAAGTGTCAGATTTTGGAGCATCAAGGTTGATTCCACTTGATCAAACTGAAGTAGCCACAATGGTGCAAGGAACTATTGGCTACTTGGATCCAGAGTATATGCAAACAAGCCAATTAACTGAGAAAAGTGATGTATATAGCTTTGGAGTAGTTCTTGTGGAGCTGCTAACGGGGGAGAAACCTTTTTGTTTTGGTAGGCCGGAAGAGAGAAGAAGTCTTGCTACGCACTTTTTATCTTGCTTGAAAAAGGATAATGTGTTTGAAGTTATTCAAGATGGTTTGTGGAATGAAGAAAACAAACAAGTGATCATGGAGGTGGCTGTTCTTGCGGCGAACTGTTTGAGACTTATAGGGGAGGAAAGACCAAGCATGAAGGAAGTGGCTATGGAATTGGAGGGAATGAGGTTAATGGATAAGCACTCTTGGATCAATGCAGACCTTAATGTAGAGGAGAGTCCACTACTTGCTTCATGA 2202 0.3783 MPQDTKKAYHFSSTKFVIQFKAMHPLIMVSLALLIETVASDQPKQVLPGCNYTCGDLTIPYPFGIGNSTAQHHTPCYMDSKFELTCVNNSKLIRPRGIEVLDINPQGQVEMKFSVSHLCSNGSSSSNNTEEANRAYLIVSPHTISSTENKFITVGCDSYGYLNSNFTGGTYSTGCLTRCYDFKPKIVIGNNTGKCTGLGCCQVDIPSSMKNITIEAFKFPTSTLSKENSCSYSFIAKQGSYKFSVDHINNLPNETFPLVINWAITNESCQIAHTTNSYACKKNSECVDDDPDYDGYRCKCLQGFEGNPYLPGGCTDIDECATKTHVCKNKANCNNTLGSHTCFCPKGQTGNGTKEGGCQKVHLNATRIVLPTVLGAGALFMIFFLIYQRRKFIKLKEKFFRQNGGSILEQKLLQRKDSSQIAHIFKENELRKATNNFDESLIIGRGGFGTVFKGELDDNRIVAIKKSKTIDESQIEQFINEVDVVSQINHRNVVKLLGCCLETEVPLLVYEFVSNGTLSEFLRTQGKTNDLTWKTRLRIAVEVAGALSYLHSAASIPIIHRDVKSANILLDGTNTAKVSDFGASRLIPLDQTEVATMVQGTIGYLDPEYMQTSQLTEKSDVYSFGVVLVELLTGEKPFCFGRPEERRSLATHFLSCLKKDNVFEVIQDGLWNEENKQVIMEVAVLAANCLRLIGEERPSMKEVAMELEGMRLMDKHSWINADLNVEESPLLAS* 734
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr1g0170 733 SMART egfca_6 316 359 IPR001881 GO:0005509
Mtr1g0170 733 Gene3D Transferase(Phosphotransferase) domain 1 513 726 - -
Mtr1g0170 733 Pfam Protein tyrosine and serine/threonine kinase 443 707 IPR001245 GO:0004672|GO:0006468
Mtr1g0170 733 Gene3D Phosphorylase Kinase; domain 1 402 512 - -
Mtr1g0170 733 ProSitePatterns Protein kinases ATP-binding region signature. 443 466 IPR017441 GO:0005524
Mtr1g0170 733 Pfam Calcium-binding EGF domain 316 358 IPR001881 GO:0005509
Mtr1g0170 733 ProSiteProfiles EGF-like domain profile. 316 359 IPR000742 -
Mtr1g0170 733 CDD EGF_CA 316 350 - -
Mtr1g0170 733 SMART serkin_6 437 719 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr1g0170 733 SUPERFAMILY Protein kinase-like (PK-like) 419 708 IPR011009 -
Mtr1g0170 733 Gene3D Laminin 266 358 - -
Mtr1g0170 733 CDD STKc_IRAK 443 710 - -
Mtr1g0170 733 SMART egf_5 268 315 IPR000742 -
Mtr1g0170 733 SMART egf_5 319 359 IPR000742 -
Mtr1g0170 733 ProSitePatterns Serine/Threonine protein kinases active-site signature. 558 570 IPR008271 GO:0004672|GO:0006468
Mtr1g0170 733 PANTHER WALL-ASSOCIATED RECEPTOR KINASE 2-LIKE ISOFORM X2 30 729 - -
Mtr1g0170 733 SUPERFAMILY EGF/Laminin 316 351 - -
Mtr1g0170 733 PANTHER WALL-ASSOCIATED RECEPTOR KINASE-LIKE 21 30 729 IPR045274 GO:0007166
Mtr1g0170 733 ProSiteProfiles Protein kinase domain profile. 437 719 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr1g0170 733 Pfam Wall-associated receptor kinase galacturonan-binding 50 108 IPR025287 GO:0030247
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr1g0170 Mtr-Chr1 1864347 1867448 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr1g0170 26 718 Receptor kinase-like Gene Family AT1G21230 46.424 0.0 573
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_WAK Mtr1g0170 PK_Tyr_Ser-Thr 1.5e-53 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr1g0170 - - gsj:114381577 852.818