Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Mtr1g0170 | ATGCCACAAGACACTAAAAAGGCCTATCATTTTTCTTCTACTAAATTTGTGATTCAATTCAAGGCAATGCATCCATTGATAATGGTTTCATTAGCACTTTTGATAGAAACAGTTGCATCTGATCAACCTAAACAAGTCCTACCAGGCTGCAATTACACCTGTGGAGATTTAACAATTCCATATCCATTTGGCATAGGAAATTCAACAGCACAACATCATACACCATGTTACATGGATTCAAAATTTGAACTCACCTGTGTAAACAACTCAAAATTAATTCGGCCTAGGGGTATCGAAGTCCTGGACATAAATCCCCAAGGTCAAGTGGAAATGAAATTTTCAGTCTCACATCTTTGTTCGAATGGTAGTAGTAGTAGTAATAATACTGAAGAAGCAAATAGAGCTTATCTCATAGTTTCTCCTCACACAATTTCAAGTACGGAAAACAAATTCATAACCGTTGGTTGCGACAGTTACGGATATCTCAACAGTAATTTCACAGGTGGCACTTATTCAACAGGGTGCTTAACAAGATGTTATGATTTTAAACCTAAAATAGTAATTGGGAATAACACTGGAAAATGCACAGGTTTAGGGTGTTGCCAAGTGGATATTCCTTCTAGTATGAAAAATATCACAATTGAAGCATTTAAATTCCCAACTTCTACCCTATCTAAGGAAAATTCTTGTAGCTATTCCTTTATTGCAAAACAAGGATCCTATAAATTTTCTGTAGACCATATAAATAATCTACCTAATGAAACTTTCCCCTTGGTTATTAATTGGGCTATTACAAATGAATCATGTCAAATAGCTCACACTACAAATAGCTACGCCTGCAAGAAAAATAGTGAATGTGTCGATGACGATCCAGATTATGATGGTTACAGATGCAAGTGTTTACAAGGTTTTGAAGGAAATCCATACCTTCCTGGAGGCTGCACAGACATTGACGAATGTGCAACAAAAACTCATGTATGCAAAAATAAAGCAAATTGTAATAACACTTTGGGGAGTCACACTTGTTTTTGTCCCAAGGGGCAAACCGGAAATGGAACAAAGGAAGGAGGGTGCCAGAAAGTTCATCTAAATGCAACTCGAATAGTACTTCCTACTGTCCTTGGAGCAGGAGCATTATTTATGATTTTCTTCTTAATATACCAAAGAAGGAAATTTATCAAATTGAAAGAGAAGTTCTTTAGGCAGAATGGAGGTTCTATTTTGGAACAAAAACTTCTTCAAAGAAAAGACTCGTCTCAAATAGCTCACATTTTCAAAGAAAATGAACTAAGGAAAGCTACTAACAACTTTGATGAGAGCTTAATCATAGGTAGAGGAGGTTTTGGTACAGTTTTCAAAGGGGAACTTGATGATAATAGAATTGTGGCTATCAAAAAGTCCAAAACAATAGACGAAAGCCAAATTGAACAATTCATTAACGAGGTGGATGTTGTCTCTCAAATAAATCACAGGAATGTGGTCAAACTCTTGGGGTGTTGTCTAGAAACAGAAGTTCCTTTGTTGGTTTATGAGTTTGTTAGCAATGGTACTCTTTCTGAATTTCTTCGCACACAAGGTAAGACGAACGATCTTACTTGGAAAACTCGTCTTAGGATAGCTGTTGAGGTAGCTGGAGCTCTGTCATATCTGCATTCAGCTGCCTCAATACCCATTATCCATAGAGATGTCAAGAGTGCTAACATTCTCTTAGATGGAACCAACACCGCTAAAGTGTCAGATTTTGGAGCATCAAGGTTGATTCCACTTGATCAAACTGAAGTAGCCACAATGGTGCAAGGAACTATTGGCTACTTGGATCCAGAGTATATGCAAACAAGCCAATTAACTGAGAAAAGTGATGTATATAGCTTTGGAGTAGTTCTTGTGGAGCTGCTAACGGGGGAGAAACCTTTTTGTTTTGGTAGGCCGGAAGAGAGAAGAAGTCTTGCTACGCACTTTTTATCTTGCTTGAAAAAGGATAATGTGTTTGAAGTTATTCAAGATGGTTTGTGGAATGAAGAAAACAAACAAGTGATCATGGAGGTGGCTGTTCTTGCGGCGAACTGTTTGAGACTTATAGGGGAGGAAAGACCAAGCATGAAGGAAGTGGCTATGGAATTGGAGGGAATGAGGTTAATGGATAAGCACTCTTGGATCAATGCAGACCTTAATGTAGAGGAGAGTCCACTACTTGCTTCATGA | 2202 | 0.3783 | MPQDTKKAYHFSSTKFVIQFKAMHPLIMVSLALLIETVASDQPKQVLPGCNYTCGDLTIPYPFGIGNSTAQHHTPCYMDSKFELTCVNNSKLIRPRGIEVLDINPQGQVEMKFSVSHLCSNGSSSSNNTEEANRAYLIVSPHTISSTENKFITVGCDSYGYLNSNFTGGTYSTGCLTRCYDFKPKIVIGNNTGKCTGLGCCQVDIPSSMKNITIEAFKFPTSTLSKENSCSYSFIAKQGSYKFSVDHINNLPNETFPLVINWAITNESCQIAHTTNSYACKKNSECVDDDPDYDGYRCKCLQGFEGNPYLPGGCTDIDECATKTHVCKNKANCNNTLGSHTCFCPKGQTGNGTKEGGCQKVHLNATRIVLPTVLGAGALFMIFFLIYQRRKFIKLKEKFFRQNGGSILEQKLLQRKDSSQIAHIFKENELRKATNNFDESLIIGRGGFGTVFKGELDDNRIVAIKKSKTIDESQIEQFINEVDVVSQINHRNVVKLLGCCLETEVPLLVYEFVSNGTLSEFLRTQGKTNDLTWKTRLRIAVEVAGALSYLHSAASIPIIHRDVKSANILLDGTNTAKVSDFGASRLIPLDQTEVATMVQGTIGYLDPEYMQTSQLTEKSDVYSFGVVLVELLTGEKPFCFGRPEERRSLATHFLSCLKKDNVFEVIQDGLWNEENKQVIMEVAVLAANCLRLIGEERPSMKEVAMELEGMRLMDKHSWINADLNVEESPLLAS* | 734 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Mtr1g0170 | 733 | SMART | egfca_6 | 316 | 359 | IPR001881 | GO:0005509 | |
Mtr1g0170 | 733 | Gene3D | Transferase(Phosphotransferase) domain 1 | 513 | 726 | - | - | |
Mtr1g0170 | 733 | Pfam | Protein tyrosine and serine/threonine kinase | 443 | 707 | IPR001245 | GO:0004672|GO:0006468 | |
Mtr1g0170 | 733 | Gene3D | Phosphorylase Kinase; domain 1 | 402 | 512 | - | - | |
Mtr1g0170 | 733 | ProSitePatterns | Protein kinases ATP-binding region signature. | 443 | 466 | IPR017441 | GO:0005524 | |
Mtr1g0170 | 733 | Pfam | Calcium-binding EGF domain | 316 | 358 | IPR001881 | GO:0005509 | |
Mtr1g0170 | 733 | ProSiteProfiles | EGF-like domain profile. | 316 | 359 | IPR000742 | - | |
Mtr1g0170 | 733 | CDD | EGF_CA | 316 | 350 | - | - | |
Mtr1g0170 | 733 | SMART | serkin_6 | 437 | 719 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Mtr1g0170 | 733 | SUPERFAMILY | Protein kinase-like (PK-like) | 419 | 708 | IPR011009 | - | |
Mtr1g0170 | 733 | Gene3D | Laminin | 266 | 358 | - | - | |
Mtr1g0170 | 733 | CDD | STKc_IRAK | 443 | 710 | - | - | |
Mtr1g0170 | 733 | SMART | egf_5 | 268 | 315 | IPR000742 | - | |
Mtr1g0170 | 733 | SMART | egf_5 | 319 | 359 | IPR000742 | - | |
Mtr1g0170 | 733 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 558 | 570 | IPR008271 | GO:0004672|GO:0006468 | |
Mtr1g0170 | 733 | PANTHER | WALL-ASSOCIATED RECEPTOR KINASE 2-LIKE ISOFORM X2 | 30 | 729 | - | - | |
Mtr1g0170 | 733 | SUPERFAMILY | EGF/Laminin | 316 | 351 | - | - | |
Mtr1g0170 | 733 | PANTHER | WALL-ASSOCIATED RECEPTOR KINASE-LIKE 21 | 30 | 729 | IPR045274 | GO:0007166 | |
Mtr1g0170 | 733 | ProSiteProfiles | Protein kinase domain profile. | 437 | 719 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Mtr1g0170 | 733 | Pfam | Wall-associated receptor kinase galacturonan-binding | 50 | 108 | IPR025287 | GO:0030247 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Mtr1g0170 | Mtr-Chr1 | 1864347 | 1867448 | Tandem |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Mtr1g0170 | 26 | 718 | Receptor kinase-like Gene Family | AT1G21230 | 46.424 | 0.0 | 573 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
PK | RLK-Pelle_WAK | Mtr1g0170 | PK_Tyr_Ser-Thr | 1.5e-53 | CL0016 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Mtr1g0170 | - | - | gsj:114381577 | 852.818 |