Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr1g0144 ATGTTCTCCAATTCCCAATTCGATTCCTCCAACGCCTTCTCCGGCGGCGGATTCATGTCCTCGCAACCCAACGATTCTTCTCCGGCACCGACTAAAAGTCGCGATTCTCAGGGTTTGATTCCGGTTACGGTGAAGCAGATAAGTGAAGCTTCTCATTCTGGAGATGAAAAATCCAATTTCTCAATTAACGGTGTAGATCTGACTAATGTTACATTGGTTGGAATGGTGTATGAGAAAACAGAGAGGAACACGGATGTTAATTTTGTTTTGGATGATGGAACTGGACGGATCAAATGCCGAAGATGGGTAAATGATACTTTTGACTCAAAGGAAATGGAAGAAGTACTGAATGGCATGTATGTTCGTGTTTATGGGTCCTTGAAAAGCTTTCAAGGTGTAAGGCAACTTGTAGCCTTCTCTGTCAGGCCCGTGACAAATTTTGATGAGATCCCGTTTCACTTTATTGACTGCATACATAACCACCTCCGCAGCAAACTAAAGATAGAAGGAATCACTTCTGCACTTCCTTCATCAAACTCGTCTATGAATACTCCTGTCAGAAATGTCTCAAATGGATCTCAGGCACCATCATCAAATCCGGGATATGTACAATATAGCACTGATGGACTCAAGGATATTGATAAATTGGTCCTTAACTATCTGGAGAAGCATTCACACATAGAGACGGGAGTACATGTTGATGAGTTATCAAGAGAGCTCAAGCTTCCATTGGACAAGATCATGTTGTTGCTGAAGACTCCTTTAGAGGAAGGTGTGATTTACTCCACCATAGATGATTCCCACTACAAACTTGCTTGA 819 0.4225 MFSNSQFDSSNAFSGGGFMSSQPNDSSPAPTKSRDSQGLIPVTVKQISEASHSGDEKSNFSINGVDLTNVTLVGMVYEKTERNTDVNFVLDDGTGRIKCRRWVNDTFDSKEMEEVLNGMYVRVYGSLKSFQGVRQLVAFSVRPVTNFDEIPFHFIDCIHNHLRSKLKIEGITSALPSSNSSMNTPVRNVSNGSQAPSSNPGYVQYSTDGLKDIDKLVLNYLEKHSHIETGVHVDELSRELKLPLDKIMLLLKTPLEEGVIYSTIDDSHYKLA* 273
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr1g0144 272 CDD RPA2_DBD_D 69 162 - -
Mtr1g0144 272 PIRSF RPA32 1 272 IPR014646 GO:0003677|GO:0005634|GO:0006260|GO:0006281|GO:0006310
Mtr1g0144 272 PANTHER REPLICATION PROTEIN A-RELATED 1 272 IPR040260 -
Mtr1g0144 272 SUPERFAMILY Nucleic acid-binding proteins 39 163 IPR012340 -
Mtr1g0144 272 Gene3D - 204 272 IPR036388 -
Mtr1g0144 272 Gene3D - 31 165 IPR012340 -
Mtr1g0144 272 MobiDBLite consensus disorder prediction 1 38 - -
Mtr1g0144 272 Pfam Replication protein A C terminal 180 266 IPR014892 -
Mtr1g0144 272 SUPERFAMILY "Winged helix" DNA-binding domain 208 271 IPR036390 -
Mtr1g0144 272 PANTHER REPLICATION PROTEIN A 32 KDA SUBUNIT A 1 272 - -
Mtr1g0144 272 Pfam OB-fold nucleic acid binding domain 70 142 IPR004365 GO:0003676
Mtr1g0144 272 MobiDBLite consensus disorder prediction 179 200 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr1g0144 Mtr-Chr1 1624740 1628965 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr1g0144 1 270 Core DNA Replication Machinery Family AT2G24490 47.122 1.07e-85 255
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr1g0144 K10739 - gmx:100802512 422.55