Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr1g0127 ATGGCTGATTCTAGTTCTGGTTGTTCTGGTTCTGGTTCTGTTAGTTTGAAAAGTGATAGTAGAATTGAGAATTTGATTTTAGCTAGTAAATCATTGAAACTTAGTTTAGACAAATCAAAGAGTGTTGGATTAGCATTAGAGAAAGCAGGGCCAAGGTTAGATGAAATTAGGGTAAGGTTGCCTTGGCTTGAATCCGCGGTGAGGCCGATTCGGGCTGAAAAGGATGCTCTTGTGGCGGTTGGAGGCCATATTAATAGGGCTGTTGGTCCTGCGGCTGCTGTTTTGAAGGTTTTCGATGCGGTTCATGGACTTGAGAAGTCGTTGTTGTCGGATCCGCGGATTGATCTGCCGGGTTATTTGTCGGTTTTGAAGCGTCTTGAGGAGGCATTGAGGTTTTTGGGAGATAATTGTGGGTTGGCTATTCAGTGGTTGGATGATATAGTTGAGTATTTAGAAGATAATTCGGTTGCAGATCAGGTTTATCTTAAGAATTTGAAGAAGGAGTTGGAGAGTCTTAAGGGATCGCAGAATGGTGATTTGGATGGTGGCTTGTTAGATGCTGCTTTGGATAAATTAGAGAATGAGTTTAGGTTGCTTTTAACGGAAAACAGTGTGCCGCTTCCTATGTTGTCGGATTCTCTTGGTGATCAGGCTTGCATTGCGCCTTCACCTTTGCCTGTTTCTGTTGTTCACAAATTGCAGGCTATTCTTGGTAGGTTGAGAGCTAATGATAGACTTGACAAGTGTGTGTCGATTTACGTCGAAGTTAGAAGTTCTAATGTGAGGGCGAGTTTGCAGGCGCTGAATTTGGATTACCTTGAGATCTCAGTTTCTGAGTTCAATGATGTGCAGAGCATAGAGGTGTATATAGCTCAGTGGGGAAAGCATTTGGAGTTTGCAGTGAAACATTTGTTTGAGGCTGAGTATAAGCTTTGTAACGATGTGTTTGAGAGGCTTGGACGTGATGTGTGGATGGGTTGCTTCTCAAAGATAGCTGCACAAGCCGGTATACTTGCATTTCTTCAGTTCGGTAAGACTGTTACGGAGAGTAAGAAAGATCCCATTAAGCTTTTGAAGTTGTTGGATATTTTTGCGTCGTTGAACAAATTGAGACTGGATTTCAACCGTCTTTTTGGGGGAGATGCGTGCGTTGAAATCCAAAATTTGACAAGGGAACTTATCAAGAGTGTGATTGATGGGGCTGCAGAAATTTTCTGGGAACTTCTGGTTCAGGTAGAGTTACAGAGGCCGAACCCTCCTCCTCCAGATGGAAGTGTCCCAAGATTGGTGAGCTTTATAACTGATTACTGCAATAAACTCTTGGGGGACGACTATAAGCCTATACTGACCCAAGTCCTGATCATTCACCGAAGTTGGAAACGTCAAAGCTTTCAGGAGAGGCTCCTCGTTAATGAGATTTTGAACATATTGAAAGCCGTGGAATTAAATTTGGAGACGTGGATCAAGGCTTATGATGATCCTATGTTGTCCAACTTTTTTGCAATGAACAATCACTGGCATCTTTTCAAACATTTGAAAGGGACAAAGCTTGGGGATCTTTTAGGTGATTCTTGGTTAAAGGAACACGAGCAGTATAAGGACTATTACTCCACAATATTCTTGCGTGATAGCTGGGGAAAGCTCCCTGGACATTTGAGTAGGGAAGGGCTGATTCTTTTCTCGGGAGGGCGTGCCACTGCTCGTGATCTGGTCAAGAAAAGATTGAAAAAATTCAACGAGGTTTTTGATGAGATGTTTTCCAAGCAGTCAGGTTGGATCATGGTAGAACGAGATCTGAGAGAGAAGACGTGTCAGCTTATAGTGCAGGCTGTGGTGCCTGTTTACCGGAGTTACATGCAGAATTATGGTCCCTTGGTTGAGCAAGATAACAGCTCCAATAAATATGCAAAATACACAGTACAGAAGCTGGAAGAAATGCTTTTGTGTCTTTACCGGCCGAAGCCTGCAAGACATGGAAGCATGAAAATTCCGCAGCTTAGTGGAAAGTATGGCAATGGAATGCCCGATCTTCGTCGTACGGCTTCAGCAGTTGTGTAG 2058 0.4329 MADSSSGCSGSGSVSLKSDSRIENLILASKSLKLSLDKSKSVGLALEKAGPRLDEIRVRLPWLESAVRPIRAEKDALVAVGGHINRAVGPAAAVLKVFDAVHGLEKSLLSDPRIDLPGYLSVLKRLEEALRFLGDNCGLAIQWLDDIVEYLEDNSVADQVYLKNLKKELESLKGSQNGDLDGGLLDAALDKLENEFRLLLTENSVPLPMLSDSLGDQACIAPSPLPVSVVHKLQAILGRLRANDRLDKCVSIYVEVRSSNVRASLQALNLDYLEISVSEFNDVQSIEVYIAQWGKHLEFAVKHLFEAEYKLCNDVFERLGRDVWMGCFSKIAAQAGILAFLQFGKTVTESKKDPIKLLKLLDIFASLNKLRLDFNRLFGGDACVEIQNLTRELIKSVIDGAAEIFWELLVQVELQRPNPPPPDGSVPRLVSFITDYCNKLLGDDYKPILTQVLIIHRSWKRQSFQERLLVNEILNILKAVELNLETWIKAYDDPMLSNFFAMNNHWHLFKHLKGTKLGDLLGDSWLKEHEQYKDYYSTIFLRDSWGKLPGHLSREGLILFSGGRATARDLVKKRLKKFNEVFDEMFSKQSGWIMVERDLREKTCQLIVQAVVPVYRSYMQNYGPLVEQDNSSNKYAKYTVQKLEEMLLCLYRPKPARHGSMKIPQLSGKYGNGMPDLRRTASAVV* 686
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr1g0127 685 Pfam Exo70 exocyst complex subunit 292 647 IPR046364 GO:0000145|GO:0005546|GO:0006887
Mtr1g0127 685 Gene3D Exocyst complex component Exo70 92 658 - -
Mtr1g0127 685 PANTHER EXOCYST COMPLEX PROTEIN EXO70 21 674 IPR004140 GO:0000145|GO:0006887
Mtr1g0127 685 PANTHER EXOCYST SUBUNIT EXO70 FAMILY PROTEIN 21 674 - -
Mtr1g0127 685 SUPERFAMILY Cullin repeat-like 94 651 IPR016159 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr1g0127 Mtr-Chr1 1427183 1430179 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr1g0127 19 685 EXO70 exocyst subunit family AT4G31540 73.971 0.0 1025
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr1g0127 K07195 - gmx:100796139 1157.9