Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr1g0118 ATGATGACTCATAAAAGAGCATACTATTGCATTTTCATACTCTTTATGTTGTTCATTAATTTAGAGCCTACTTTTGGTGACACAAATGGTCAAATTTTGATAAGGTTCAAAAGTTTTTTGTCCAATGCCAATGCTTTAAACAATTGGGTTGATGAGGCTAATTTGTGCAATTGGGCTGGTTTGTTATGCACAAATAACAAGTTTCATGGATTGAGATTAGAGAATATGGGACTAGGTGGGAAAATTGATGTAGACACATTGGTTGAATTGACTGATTTGGTTAGTTTTAGTGTCAATAACAACACATTTGAGGGTCCAATGCCTGAATTCAAGAAGCTTGTGAAGTTAAGGGGATTGTTTTTGTCTAATAATAAATTCTCTGGTGAAATTTCAGATGATAGTTTTGAGGGTATGGGAAATCTTAAAAGGGTATTTTTGGCAGGAAATGGGTTCAATGGTCATATTCCTCTTTCACTTGCTAAATTGCCTAGACTTTTGGATTTGGATTTGCATGGGAATAGTTTTGGAGGTAACATACCTGAATTTCAACAAAATGGTTTTAGAGTATTTGACTTGTCTAACAATCAGTTGGAGGGTCCAATACCAAATAGCTTAAGCAATGAGCCTTCAACTTCATTTTCTGCCAACAAAGGCCTATGTGGAAAACCTTTGAACAATCCTTGCAACATACCTCCAACAAAATCTATTGTGCAAACTAATTCAGTTTTCTCAACTCAAGGAAATGGAAAGAAGAACAAAAAAATCCTTATAGTTGTCATTGTAGTGGTATCTATGGTGGTTTTAGCTTCAATATTAGCACTTTTGTTTATCCAAAGCCGCCAGCGACGAAGATCAGAACAAGACCAACCCATAATAGGGCTACAACTGAATTCTGAAAGCAATCCAAGTCCAAGTGTCAAGGTGACAAAATCCATTGATTTAGCTGGTGATTTTAGTAAAGGTGAAAATGGAGAATTGAATTTTGTTAGGGAAGATAAAGGTGGTTTTGAGTTGCAAGATCTTCTTAGGGCTTCAGCTGAAGTGCTTGGAAGTGGAAGTTTTGGATCAACTTATAAGGCAATAGTTTTGAATGGACCAACTGTGGTGGTTAAGAGATTTAGGCACATGAATAATGTTGGTAAACAAGAGTTTTTTGAACACATGAAAAAGCTTGGAAGTTTGACACATCCTAATCTACTTCCTCTTATTGCATTCTACTACAAAAAAGAAGAGAAGTTTTTGGTTTATGATTTTGGTGAAAATGGAAGCTTGGCTAGTCATCTACATGGTAGAAACAGCATTGTACTAACCTGGTCAACTCGTCTAAAAATCATAAAAGGAGTAGCAAGAGGCTTAGCACACCTCTACAAAGAATTCCCTAAACAAAACCTACCACATGGTCATCTAAAATCCTCCAATGTAATGCTAAACATTTCCTTTGAGCCACTTTTAACTGAGTATGGACTTGTACCTATAACAAACAAAAACCATGCACAACAATTCATGGCATCCTACAAATCACCAGAAGTCACACACTTTGATAGACCAAATGAAAAAACAGACATATGGTGTCTTGGAATCCTCATACTAGAATTATTAACAGGAAAATTTCCAGCAAATTATTTAAGACATGGAAAAGGCGAAAATTCCGATTTAGCAACATGGGTGAATTCAGTTGTAAGGGAAGAATGGACAGGTGAAGTGTTTGATAAGAATATAATGGGGACAAGAAATGGTGAAGGTGAGATGTTGAAGCTTTTGAGGATTGGAATGTACTGTTGTGAATGGAGTGTTGAGAGAAGATGGGATTGGAAAGAAGCTTTGGATAAGATTGAAGAGCTTAAGGAGAATGATGGTGAAGATGAATCTTTTTCTTATGTTAGTGAAGGTGATTTGTATTCAAGAGGTGCAACTGAGGATGAATTTTCTTTTTCTGTTACTGATTCACAGGCTGATAAGTTTGGAAATGTTACAGGCTAG 1980 0.3606 MMTHKRAYYCIFILFMLFINLEPTFGDTNGQILIRFKSFLSNANALNNWVDEANLCNWAGLLCTNNKFHGLRLENMGLGGKIDVDTLVELTDLVSFSVNNNTFEGPMPEFKKLVKLRGLFLSNNKFSGEISDDSFEGMGNLKRVFLAGNGFNGHIPLSLAKLPRLLDLDLHGNSFGGNIPEFQQNGFRVFDLSNNQLEGPIPNSLSNEPSTSFSANKGLCGKPLNNPCNIPPTKSIVQTNSVFSTQGNGKKNKKILIVVIVVVSMVVLASILALLFIQSRQRRRSEQDQPIIGLQLNSESNPSPSVKVTKSIDLAGDFSKGENGELNFVREDKGGFELQDLLRASAEVLGSGSFGSTYKAIVLNGPTVVVKRFRHMNNVGKQEFFEHMKKLGSLTHPNLLPLIAFYYKKEEKFLVYDFGENGSLASHLHGRNSIVLTWSTRLKIIKGVARGLAHLYKEFPKQNLPHGHLKSSNVMLNISFEPLLTEYGLVPITNKNHAQQFMASYKSPEVTHFDRPNEKTDIWCLGILILELLTGKFPANYLRHGKGENSDLATWVNSVVREEWTGEVFDKNIMGTRNGEGEMLKLLRIGMYCCEWSVERRWDWKEALDKIEELKENDGEDESFSYVSEGDLYSRGATEDEFSFSVTDSQADKFGNVTG* 660
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr1g0118 659 Gene3D Ribonuclease Inhibitor 186 230 IPR032675 -
Mtr1g0118 659 Gene3D Ribonuclease Inhibitor 26 185 IPR032675 -
Mtr1g0118 659 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE PXC1 11 623 - -
Mtr1g0118 659 Gene3D Phosphorylase Kinase; domain 1 312 418 - -
Mtr1g0118 659 Pfam Protein kinase domain 346 608 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr1g0118 659 PANTHER LRR RECEPTOR-LIKE KINASE 11 623 - -
Mtr1g0118 659 Gene3D Transferase(Phosphotransferase) domain 1 420 632 - -
Mtr1g0118 659 ProSitePatterns Protein kinases ATP-binding region signature. 349 371 IPR017441 GO:0005524
Mtr1g0118 659 ProSiteProfiles Protein kinase domain profile. 343 614 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr1g0118 659 SUPERFAMILY L domain-like 53 208 - -
Mtr1g0118 659 Pfam Leucine rich repeat N-terminal domain 30 63 IPR013210 -
Mtr1g0118 659 SUPERFAMILY Protein kinase-like (PK-like) 347 615 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr1g0118 Mtr-Chr1 1284036 1288221 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr1g0118 9 644 Receptor kinase-like Gene Family AT4G31250 44.898 0.0 571
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Mtr1g0118 Pkinase 2.8e-27 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr1g0118 - - gmx:100781593 891.723