Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr1g0111 ATGCAACCCTTCAAGCCAAATTCATCACAAGAACAAACAAAGAAATTTCTTACATATCCAACCGACAAAGAAAGAGACATCACCATCAATATCATCACCATGTCAATGGATCAAAAGAAATCTAACAAAATTAGAGAAATTGTTAGACTTCAACAGATCCTTAAGAAATGGAGAAAAATAGCAAACTCATCAAAAACCACAGCCAACACCACCACCATCACTAGAAGCAAAAGCATGAAGTTTCTAAAAAGAACACTTTCTCTTTCTGAACGTGAAGGAGGAACAACATCATCAAACAACAATGGTTCTGTTCCAAAAGGATATTTAGCTGTTTGTGTTGGAGAAGAGCTTAAGAGGTTCATCATACCAACTGAATATTTGGGTCATCAAGCTTTTCAGATTCTTTTGAGAGAAGCTGAAGAAGAATTTGGGTTTCAACAAGCTGGTGTATTGAGGATTCCTTGTGAAGTCTCTACTTTTGAGAGTATTTTGAAGATGGTTGAAGATCATGGAAAGAATAAGGACAAGTTTTCAAATCAAGAATGTAGATCAATTAGCATTGAAGAGATGATGGGTTATTGTTCTTTAGAAAATCAACTTGCTTGTTCTCATCATCCTCAAAGTCCATTGTGTAGATAA 639 0.3521 MQPFKPNSSQEQTKKFLTYPTDKERDITINIITMSMDQKKSNKIREIVRLQQILKKWRKIANSSKTTANTTTITRSKSMKFLKRTLSLSEREGGTTSSNNNGSVPKGYLAVCVGEELKRFIIPTEYLGHQAFQILLREAEEEFGFQQAGVLRIPCEVSTFESILKMVEDHGKNKDKFSNQECRSISIEEMMGYCSLENQLACSHHPQSPLCR* 213
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Mtr1g0111 212 Pfam Auxin responsive protein 58 167 IPR003676 GO:0009733
Mtr1g0111 212 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 40 212 IPR003676 GO:0009733
Mtr1g0111 212 PANTHER SAUR FAMILY PROTEIN 40 212 - -
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Mtr1g0111 Mtr-Chr1 1226654 1227438 Dispersed/Wgd
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr1g0111 36 212 Calmodulin-binding Proteins AT4G31320 51.500 3.64e-57 177
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr1g0111 K14488 - gmx:100799598 250.366