Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr1g0107 ATGGAACCAAAATGGAGCACCATTCTGCCAGCAACCTCCATATTCTCCAGCTTCGATGACCTCAAATGGATCACAGCAGAATTTGATCATGAACTTTTCACCAAGCGGCCCGTTACCGTCGAAACAGCAATCGACGACAACGATGTAAAACCGTCTAAGGTGGATCCATTCCTCGGTGTCGGCGATGTTTGCTCTGATAACATCGCCAATGCCGCCGATTTTCATAATCTGGATGCTGTAACTTCATTTTCAACATGTGGTGAACCAACAAATAATATTCTTGTTTGCTCCCAAAACCTCACTCCCAAGAACTCCACCATCACTGCAACTATTGAGTCTCAATCATCCATTTCTGCCACCGTTACAAGTCCAGTGTCAGCTAATAAACCAAGCAGTAGTAGAGAAAATCAAACCAAAGGAGTGACTACTACAAGTGGTTCCTCACGTGATCCATCTGATGAAGATGATGAAGCAGGTCCTTGTGAACAAAGTACAAACCCTGTTGATATGAAGCGTCTTAGAAGGAAGGTTTCTAATCGTGAGTCTGCCAGAAGATCCAGAAGAAGGAAACAAGCACATTTGGCAGACCTTGAGGTTCAGGTTGAACAATTGAGGCTGGAAAATGCAAGCCTATTTAAGCAGCTTACAGATGCCAGCCAACAATTTCGCGATGCTAACACTAACAACCGAGTACTAAAATCCGATGTTGAAGCTTTGAGAGCTAAGGTGAAGTTAGCAGAGGACATGGTCTCTAGGGGCACTTTGCCCACTTTCAACAACCAGCTTCTCCAAAATCAGAGTCAATTGAACACCACTCCGCCGCAAATCAACAATAGTAATCTCCGTTGCATGGCGCATGTTTCGCCCACCATCACCGTACATGGAAACGACGCTTCATATGGTGTTAGTGGACAGAATTCAGCTATTGGACTTGGAGATTTTGATATATCTTGCAGTCATGATTTCAACAATGGAGTTAATAGTGATGCTGTGAGCTCTTTGACTAGCTTATGGCCATAA 1020 0.4402 MEPKWSTILPATSIFSSFDDLKWITAEFDHELFTKRPVTVETAIDDNDVKPSKVDPFLGVGDVCSDNIANAADFHNLDAVTSFSTCGEPTNNILVCSQNLTPKNSTITATIESQSSISATVTSPVSANKPSSSRENQTKGVTTTSGSSRDPSDEDDEAGPCEQSTNPVDMKRLRRKVSNRESARRSRRRKQAHLADLEVQVEQLRLENASLFKQLTDASQQFRDANTNNRVLKSDVEALRAKVKLAEDMVSRGTLPTFNNQLLQNQSQLNTTPPQINNSNLRCMAHVSPTITVHGNDASYGVSGQNSAIGLGDFDISCSHDFNNGVNSDAVSSLTSLWP* 340
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr1g0107 339 MobiDBLite consensus disorder prediction 113 148 - -
Mtr1g0107 339 CDD bZIP_plant_GBF1 172 223 IPR045314 GO:0003700|GO:0006355
Mtr1g0107 339 SMART brlzneu 167 231 IPR004827 GO:0003700|GO:0006355
Mtr1g0107 339 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 174 189 IPR004827 GO:0003700|GO:0006355
Mtr1g0107 339 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 169 232 IPR004827 GO:0003700|GO:0006355
Mtr1g0107 339 PANTHER BASIC LEUCINE ZIPPER 9 27 339 - -
Mtr1g0107 339 Gene3D - 170 227 - -
Mtr1g0107 339 Coils Coil 180 249 - -
Mtr1g0107 339 PANTHER BASIC LEUCINE ZIPPER 63 27 339 - -
Mtr1g0107 339 MobiDBLite consensus disorder prediction 113 192 - -
Mtr1g0107 339 Pfam bZIP transcription factor 170 221 IPR004827 GO:0003700|GO:0006355
Mtr1g0107 339 SUPERFAMILY Leucine zipper domain 171 221 IPR046347 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr1g0107 Mtr-Chr1 1159622 1165088 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr1g0107 112 339 bZIP Transcription Factor Family AT5G24800 50.000 4.91e-60 192
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Mtr1g0107 bZIP_1 5.6e-12 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr1g0107 K25784 - gmx:778193 365.155
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr3g4034 3 54028083 54032399 Mtr1g0107 1 1159622 1165088 PCT