Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr1g0104 ATGCCTCGTGGGACCCTTGAAGTTGTTCTCATTGGAGCAAAAGACCTCCATGACAGTGATTTGTTCGAGAAAATGGATCCCTACGTGATCCTCTCCTATCGATCTCAAGAGCATAAAAGCAGTGTAGCCAAAAATGCAGGATCAAATCCCCGTTGGAATGAAAGCTTCCTTTTCACAGTTTCTGACAATGCTGCTGAGCTTAATTTAAGGCTAATGGATGAAGACACATTTACCAAGGATGACTTGCTTGGTGAAGTAAAAATTCATTTGGGACCAGTTCTTGAGTATGGGAGCATACCAGAAACTGCTTATAATGTTGTGAAGCAGCAGAATTACTGTGGAGAGGTTCATGTGGCTCTCACTTTTCATCCTGAGGGTGGGCGGTATTGA 390 0.4333 MPRGTLEVVLIGAKDLHDSDLFEKMDPYVILSYRSQEHKSSVAKNAGSNPRWNESFLFTVSDNAAELNLRLMDEDTFTKDDLLGEVKIHLGPVLEYGSIPETAYNVVKQQNYCGEVHVALTFHPEGGRY* 130
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr1g0104 129 ProSiteProfiles C2 domain profile. 1 103 IPR000008 -
Mtr1g0104 129 SMART C2_3c 5 102 IPR000008 -
Mtr1g0104 129 PANTHER C2 DOMAIN-CONTAINING 1 129 - -
Mtr1g0104 129 PANTHER ELICITOR-RESPONSIVE-LIKE PROTEIN 1 129 - -
Mtr1g0104 129 Gene3D C2 domain 2 125 IPR035892 -
Mtr1g0104 129 Pfam C2 domain 4 98 IPR000008 -
Mtr1g0104 129 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 1 126 IPR035892 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr1g0104 Mtr-Chr1 1134445 1137153 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr1g0104 4 94 C2H2 Transcription Factor Family AT4G21160 34.066 2.38e-13 63.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr1g0104 - - gmx:100814819 197.208