Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr1g0079 ATGTCCTTCACTTTAGTCTCCATTGTTCTTCATTTCTTTGCTTTAACAGCAATGGTGGAAGGTGCTTTCCTCTCTGCAACGGTTGAATCCTTGTTGCATAAGCTTGCTTCATCAGAATTCACTGATTACATCAAATACAGTGAGTTGAATATCTTGAAACTCACAGTGTTTGTAACAACTCTGCTCACTCTTCGCTCAGTTCTTCACGATGCTGAACAGAAGCAGTTCTTCAATCCCAAAATCAAACAATGGATGAATGAGCTGTACAATGCAATCGTTGTTTCCGAAGATTTGCTTGACGAAATTGGCTATGATTCTCTTCGATGCAAGGTCGAGAATACACCGCCTAAATCAAATTTTATATTTGATTTCCAAATGAAGATTGTTTGTCAAAGGCTTCAACGTTTTGTTCGTCCGATAGATGCTCTTGGTTTGCGACCAGTAAGTGGTTCGGTTTCTGGTAGTAATACTCCTTTAGTGATTAATGAATTTGTTATAATTGGTAGGGAGGATGATAAGGAGAGATTGATGAGTATGTTGGTGTCAGGAAATGACAATGACATTGACACAAGCGGTAATAACAATAACAACAAATTAGGCGTGATTGCAATTTTAGGTGATGGAGGTGTTGGTAAATCGACACTTGCTCGACTTGTTTACAATGATAAGAAAGTTGATGAGCATTTTGATTTGAAAGTCTGGGTTTGTGTCACCGAGGATTTTGATATTTCTAGAATCACAAAAGCTCTACTTGAATCTGTCAGCTCAACAATAGCTTATGTAGGAAATGATTTGGATGATGTTCGAGTTCGTTTAAAGGGGGGTTTGATGCGTAAAAGATTTTTGTTTGTGTTGGATGGCTTATGGAATGATAGTTATAATGACTGGCATGATCTAATTGCTCCATTGGTTAATGGAAATTGTGGAAGTAGGGTGATCATCACAACACGCTACGAAAGAGTTGCAGAGGTTGCACATACGTATCCTATTCATAAATTGGAACCTCTATCGGACGAACATTGTTGGTCTTTACTCTCCAAGTATGCATTTGGAAGTGGTGACATTAAATACCCAACCTTAGAAGCAATTGGGAAGAAGATTGCAAAAAAGTGTGGTGGATTGCCAATAGCTGCCAAAACGCTAGGAGGGCTTTTGAGCTCAAAGTTAAATGCAAAGGAGTGGACCGAAATCTTGAACAGCAACATATGGAACATACCAAATAATAACATTCTGCCTGCTTTGCTTTTGAGTTATCTATACCTTCCCTCTCATTTGAAAAGATGTTTCGTCTATTGCTCAATTTTTCCCAAGGGTTATCCCCTTGAAAAAAAGCATTTGGTTTTGTTGTGGATGGCAGAAGGCTTCCTTGAACATTCTATGGTTGGAAAAGTTGAAGAGGAGGTAGGTGATGACTTCTTTATGGAATTGTTTTCGAGATCCTTAATTGAAAAATTCAAGGATGATGCTGATAGAGAAGTATTTGTCTTGCACGACCTTGTCTATGATCTAGCAACAATTGTATCCGGGAAAAATTGTTGCAAGTTTGAATTTGGTGGTAGAATCTCTAAAGATGTTCACCATTTTTCATACAATCAAGAGGAGTATGACATTTTCAAGAAGTTTGAGACTTTCTATGATTTCAAAAGCTTGCGAAGTTTCCTACCCATTGGTCCTTGGTGGCAAGAATCTTACTTATCTCGCAAGGTGGTTGATTTTATCCTCCCGTCAGTTAGAAGGTTGCGTGTGCTATCCTTATCAAATTATAAAAACATCACTATGCTGCCAGATTCAATTGGTAATTTGGTGCAGCTGCGGTATCTGAATCTCTCTCAGACTGGAATCAAATGTTTACCTGCAACAATATGTAACCTTTACTATTTGCAAACCTTGATTTTATGCTGGTGTGTGGATCTCATTGAATTATCGATACATATTGGAAAGTTAATTAATTTACGTCACCTTGATATCAGCAATGGAAACATAAAGGAGATGCCGAAGCAAATTGTTGGACTAGAAAACCTTCAAACTTTAACGGTTTTTGTAGTGGGCAAGCAAGAAGTTGGGTTAAGAGTAAGAGAGCTTGTGAAGTTTCCTAACCTACGGGGAAAACTATGCATCAAGAACTTGCATAATGTCAATGAAGCGTGTGATGCCAACTTGAAAACCAAAGAACACCTTGAGGAGTTAGAGTTATATTGGGACAAACAGTTTAAAGGTTCAATAGCAGACAAAGCAGTTCTTGATGTGTTGCAACCATCTATGAACCTCAAGAAATTGAGCATTTACTTCTATGGTGGGACGAGTTTTCCACGTTGGTTGGGAGATTGTTCATTTTCTAACATGGTGTACCTTTGCCTCAGTTCTTGTGTGTATTGTGTAACACTTCCTCCACTAGGACAACTAACTTCTCTCAAAGACCTACAAATCAAAGATATGACTAGAGTGGAAACAATTGGTGCAGAGTTCTATGGCATGACAAGTGGAGGTACTAATTTTCCATTCCAACCATTTCCTGCCCTAGAGAAGCTTGAATTTGAGAGGATGCCTAATTGGAAGCAATGGCTTTCGTTTCGAGACAATGCATTTCCCTTTCCCCGTCTTAAAACTCTGTGTTTAAGTCACTGTACAGAACTGAAGGGACATTTGCCTAGCCATCTTCCTTCCATAGAGGAAATTGCTATAATTACGTGTGATTGTTTGCTGGCTACACCATCTACTCCACATTCGCTCTCATCAGTAAAATCTCTAGATTTGCAATCTGCAGGGTCACTTGAATTGTCGTTGCTCTGGAGTGACTCTCCATGTCTTATGCAGGATGCAAAATTCTATGGCTTTAAAACGTTGCCGTCTCTACCTAAAATGTTACTGAGCTCCACTTGTCTTCAACACTTAGATCTCACATATATTGATTCTCTCGCTGCATTTCCAGCTGACTGTCTGCCCACTTCATTGCAGTCGCTTTGTATTCATGGTTGTGGGGATTTAGAATTCATGCCTCTTGAAATGTGGAGCAAGTACACATCACTTGTGAAATTAGAGTTAGGAGATTGTTGTGATGTACTTACCTCCTTCCCACTGAATGGTTTCCCCGTGCTTCGAAGTCTTACCATTGAAGGTTGTATGAACCTGGAATCCATTTTTATTTTAGATAGTGCCTCCCTTGCTCCATCAACTCTTCAATCACTGCAGGTCAGTCACTGTCATGCACTTAGATCATTGCCTCGACGGATGGACACCCTCATTGCTCTTGAAAGTTTGACTCTCACCAGTTTACCGTCCTGTTGTGAAGTAGCTTGTCTCCCTCCGCATTTACAGTTTATTCATATTGAATCCCTAAGAATAACTCCACCTTTGACTGATTCGGGCCTCCAAAACCTTATGGCTCTGTCTGATCTGCATATTGAGGGCGATGATAACGTTAACACCTTGTTGAAGGAGAAGTTGCTTCCCATTTTCCTCGTGTCTCTGACAATAAGTAATCTCTCTGAAATGAAATCCTTTGAAGGAAATGAACTTCAACTCATCTCCTCTATGAAAAATCTTAAAATTCAGTGTTGTTCAAGGCTTGAGTCTTTTGCAGAAGACACATTGCCTTCTTTTCTGAAATCACTTGTAGTTGAAGATTGTCCAGAACTCAAGTCATTGCCATTCAGGCTGCCTTCCTCTTTGGAAACACTGAAATTTGACATGTGCCCAAAACTTAGGTTATTCCGACAATACAATCTCCCTTCATCTCTTAAGCTATTGAGCATTAGGCATTGCCCTATGTTAAAAGCATGGTATGAAACTCAGAGAAGGGTATATGTGTCCAAGATTCCACACTTCCCTGTCGTAAAAATAGACCATGAAGTTACACTATGA 3861 0.3947 MSFTLVSIVLHFFALTAMVEGAFLSATVESLLHKLASSEFTDYIKYSELNILKLTVFVTTLLTLRSVLHDAEQKQFFNPKIKQWMNELYNAIVVSEDLLDEIGYDSLRCKVENTPPKSNFIFDFQMKIVCQRLQRFVRPIDALGLRPVSGSVSGSNTPLVINEFVIIGREDDKERLMSMLVSGNDNDIDTSGNNNNNKLGVIAILGDGGVGKSTLARLVYNDKKVDEHFDLKVWVCVTEDFDISRITKALLESVSSTIAYVGNDLDDVRVRLKGGLMRKRFLFVLDGLWNDSYNDWHDLIAPLVNGNCGSRVIITTRYERVAEVAHTYPIHKLEPLSDEHCWSLLSKYAFGSGDIKYPTLEAIGKKIAKKCGGLPIAAKTLGGLLSSKLNAKEWTEILNSNIWNIPNNNILPALLLSYLYLPSHLKRCFVYCSIFPKGYPLEKKHLVLLWMAEGFLEHSMVGKVEEEVGDDFFMELFSRSLIEKFKDDADREVFVLHDLVYDLATIVSGKNCCKFEFGGRISKDVHHFSYNQEEYDIFKKFETFYDFKSLRSFLPIGPWWQESYLSRKVVDFILPSVRRLRVLSLSNYKNITMLPDSIGNLVQLRYLNLSQTGIKCLPATICNLYYLQTLILCWCVDLIELSIHIGKLINLRHLDISNGNIKEMPKQIVGLENLQTLTVFVVGKQEVGLRVRELVKFPNLRGKLCIKNLHNVNEACDANLKTKEHLEELELYWDKQFKGSIADKAVLDVLQPSMNLKKLSIYFYGGTSFPRWLGDCSFSNMVYLCLSSCVYCVTLPPLGQLTSLKDLQIKDMTRVETIGAEFYGMTSGGTNFPFQPFPALEKLEFERMPNWKQWLSFRDNAFPFPRLKTLCLSHCTELKGHLPSHLPSIEEIAIITCDCLLATPSTPHSLSSVKSLDLQSAGSLELSLLWSDSPCLMQDAKFYGFKTLPSLPKMLLSSTCLQHLDLTYIDSLAAFPADCLPTSLQSLCIHGCGDLEFMPLEMWSKYTSLVKLELGDCCDVLTSFPLNGFPVLRSLTIEGCMNLESIFILDSASLAPSTLQSLQVSHCHALRSLPRRMDTLIALESLTLTSLPSCCEVACLPPHLQFIHIESLRITPPLTDSGLQNLMALSDLHIEGDDNVNTLLKEKLLPIFLVSLTISNLSEMKSFEGNELQLISSMKNLKIQCCSRLESFAEDTLPSFLKSLVVEDCPELKSLPFRLPSSLETLKFDMCPKLRLFRQYNLPSSLKLLSIRHCPMLKAWYETQRRVYVSKIPHFPVVKIDHEVTL* 1287
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr1g0079 1286 Gene3D - 417 506 IPR036388 -
Mtr1g0079 1286 Gene3D Ribonuclease Inhibitor 1102 1268 IPR032675 -
Mtr1g0079 1286 Gene3D - 28 136 - -
Mtr1g0079 1286 Gene3D - 151 329 IPR027417 -
Mtr1g0079 1286 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 159 432 IPR027417 -
Mtr1g0079 1286 SUPERFAMILY L domain-like 496 920 - -
Mtr1g0079 1286 Gene3D - 335 416 IPR042197 -
Mtr1g0079 1286 Pfam NB-ARC domain 196 399 IPR002182 GO:0043531
Mtr1g0079 1286 PRINTS Disease resistance protein signature 201 216 - -
Mtr1g0079 1286 PRINTS Disease resistance protein signature 275 289 - -
Mtr1g0079 1286 PRINTS Disease resistance protein signature 371 385 - -
Mtr1g0079 1286 PRINTS Disease resistance protein signature 908 924 - -
Mtr1g0079 1286 PANTHER DISEASE RESISTANCE PROTEIN RP 75 1006 IPR044974 GO:0006952
Mtr1g0079 1286 Gene3D Ribonuclease Inhibitor 561 931 IPR032675 -
Mtr1g0079 1286 SUPERFAMILY L domain-like 948 1258 - -
Mtr1g0079 1286 Pfam Rx N-terminal domain 55 113 IPR041118 -
Mtr1g0079 1286 PANTHER - 75 1006 - -
Mtr1g0079 1286 Gene3D Ribonuclease Inhibitor 939 1099 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr1g0079 Mtr-Chr1 860932 866035 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr1g0079 591 677 WRKY Transcription Factor Family AT4G12020 38.636 7.90e-06 48.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr1g0079 - - mtr:MTR_3g032370 1247.26