Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr1g0077 ATGTTTGCAGAAACTGGTCTTCTATTCCCTTATCTACAGAATTACTCTCATGAGTTTCAACAACTTGAAGAGTATTGCATGACTCACAAGTCCAATGCTTCAATGAGTGACCTTGTTCAATCATCTGCGATGTCAGAATTTGATTTGTTTGTAGAGGGAGATCTGTTCAAAGCACCCGAGACGATTATTGAAGAACCGGAAATGGACCTTGATCAAATGCAAGCAGCCATGTCAATGATGTCTGGTGGGGAAGACATGTCGTCGCAGGGTCTAAAATCTTCGGATATTGATGATGTGCTTCAAAGCGAACAACTTTTGAGTGAGGTCTACTATGATTGCAAAAAAGATCTCTTAGAAAAGGCCACTATAGAATCACCTCTTTCTGAAATCCTTGAAATCAAGATTCCTGCTCTGAACATTGACGAGAATTCAATTCAAGAAAACAAACCAATTCCTGATGTACTATTATCAAAGAGTGTCAGTTCAGGAAATCTGAGTTCAATGGATTGGATGCATGGTCCTGCAATGAAGCCTGCTTTCCTTGATTTCCCTGGAATAGATTTTAACGCGGTTTATGGCATGCGGAGAGCGTTTAGTGAAGGAGATATCAAGACTCTTGGCAATGGTAACATGAGTGTTGGCCAATCCACTCTAGAGAGGCCTTTTCTTCTCAGTAACTGCACGAGTGAGCAACGTCAAGAAAAACTCTCCAGATATAGGAATAAGAAGACAAGAAGAAACTTTGGCAGGAAAATCAAGTATGCTTGTAGGAAGGCGCTCGCTGACAGTCAACCAAGAATCCGAGGAAGATTTGCAAAAACAGAGGAATTAGATGTCAAGAAGCAATGA 849 0.4087 MFAETGLLFPYLQNYSHEFQQLEEYCMTHKSNASMSDLVQSSAMSEFDLFVEGDLFKAPETIIEEPEMDLDQMQAAMSMMSGGEDMSSQGLKSSDIDDVLQSEQLLSEVYYDCKKDLLEKATIESPLSEILEIKIPALNIDENSIQENKPIPDVLLSKSVSSGNLSSMDWMHGPAMKPAFLDFPGIDFNAVYGMRRAFSEGDIKTLGNGNMSVGQSTLERPFLLSNCTSEQRQEKLSRYRNKKTRRNFGRKIKYACRKALADSQPRIRGRFAKTEELDVKKQ* 283
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr1g0077 282 Pfam CCT motif 232 274 IPR010402 GO:0005515
Mtr1g0077 282 PANTHER CCT MOTIF FAMILY PROTEIN 26 281 - -
Mtr1g0077 282 PANTHER ZINC FINGER PROTEIN CONSTANS-LIKE 10 26 281 - -
Mtr1g0077 282 ProSiteProfiles CCT domain profile. 232 274 IPR010402 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr1g0077 Mtr-Chr1 840320 844884 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr1g0077 207 278 C2C2-CO-like Transcription Factor Family AT5G57660 43.243 5.32e-11 60.5
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Mtr1g0077 CCT 1.8e-17 CL0281
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr1g0077 - - gmx:100814332 426.402