Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Mtr1g0051 | ATGGTTTCACCACTTCGCCGAAGAAGAATTCCAGCTCCCAAAAAACAATCCACGACCTTCAACAACAACGACGACGACGTAGTTTGCCAGAAATGCAACTCCGGCAAATCCCCAACTAAGTTGCTTCTCTGCGACAATTGCGACAACGGCTATCATCTCTTCTGCCTCACTCCTATCCTCCCTTCCGTCCCTAAATCCTCTTGGTTTTGCCCCTCCTGCTCTCACAATCCCAAAATCCCCAAATCTTTTCCTCTTGTACAAACCAAAATTATTGATTTCTTCAAAATCCAACGAACTTCGGATGCATCTCAGATTCTGAATCATGATTCAAAGAAGAAGAGAAAGCGGAGTAGTAGCTTGGTTGTTTCAAAAAAGAAAAGAAAGTTGTTGGCATTTGTGCCAAATGATGATTTGAAGAGGAGATTAGAACAGATGGCGTCGTTGGCGACCGCGTTGACAGCTACTAAAACAGAGTTCAGTAATGAGCTTACGTATATGCCTGGAATGGCGCCAAGGGATGCTAATTCTCCTGTTCTTGAACGTGGGGGAATGCAGGTCTTATCAAAAGAAGACACCGAGACTCTTAACTTGTGCAGAAGTATGATGGAAAGAGGAGAATGTCCGCCCCTCATGGTTGTTTATGATCCTGTAGAAGGGTTCACTATAGAAGCAGATAAGTCCATCAAAGATTTGACAATAATAACAGAATATGTTGGAGATGTAGACTTTTTGAAGAATAGGGAACATGATGATGGAGATAGCATTATGACACTTCTTTCTGCTTCTAATCCTTCACAGTCACTGGTCATCTGCCCAGATAAACGTAGCAATATAGCACGTTTCATTAACGGCATCAACAATCACACTCCTGAAGGAAAAAAGAAGCAGAACTTGAAATGCGTGAGATATAACGTCGATGGTGAATGTCGGGTTCTTTTAATTGCAAATAGAGATATAGCAAAGGGGGAAAGGTTGTATTATGACTACAATGGATTAGAACATGAATATCCAACTGAACATTTTGTCTAA | 1029 | 0.415 | MVSPLRRRRIPAPKKQSTTFNNNDDDVVCQKCNSGKSPTKLLLCDNCDNGYHLFCLTPILPSVPKSSWFCPSCSHNPKIPKSFPLVQTKIIDFFKIQRTSDASQILNHDSKKKRKRSSSLVVSKKKRKLLAFVPNDDLKRRLEQMASLATALTATKTEFSNELTYMPGMAPRDANSPVLERGGMQVLSKEDTETLNLCRSMMERGECPPLMVVYDPVEGFTIEADKSIKDLTIITEYVGDVDFLKNREHDDGDSIMTLLSASNPSQSLVICPDKRSNIARFINGINNHTPEGKKKQNLKCVRYNVDGECRVLLIANRDIAKGERLYYDYNGLEHEYPTEHFV* | 343 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Mtr1g0051 | 342 | CDD | SET_ATXR5_6-like | 205 | 342 | - | - | |
Mtr1g0051 | 342 | Pfam | PHD-finger | 28 | 75 | IPR019787 | - | |
Mtr1g0051 | 342 | CDD | PHD_RSF1 | 29 | 73 | - | - | |
Mtr1g0051 | 342 | Gene3D | SET domain | 114 | 342 | IPR046341 | - | |
Mtr1g0051 | 342 | Gene3D | - | 1 | 76 | - | - | |
Mtr1g0051 | 342 | SUPERFAMILY | SET domain | 200 | 330 | IPR046341 | - | |
Mtr1g0051 | 342 | ProSiteProfiles | Zinc finger PHD-type profile. | 26 | 76 | IPR019787 | - | |
Mtr1g0051 | 342 | SUPERFAMILY | FYVE/PHD zinc finger | 23 | 84 | IPR011011 | - | |
Mtr1g0051 | 342 | SMART | PHD_3 | 28 | 74 | IPR001965 | - | |
Mtr1g0051 | 342 | PANTHER | HISTONE-LYSINE N-METHYLTRANSFERASE ATXR6 | 7 | 339 | - | - | |
Mtr1g0051 | 342 | PANTHER | HISTONE ACETYLTRANSFERASE | 7 | 339 | - | - | |
Mtr1g0051 | 342 | ProSiteProfiles | SET domain profile. | 208 | 330 | IPR001214 | GO:0005515 | |
Mtr1g0051 | 342 | ProSitePatterns | Zinc finger PHD-type signature. | 29 | 73 | IPR019786 | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Mtr1g0051 | Mtr-Chr1 | 524164 | 527564 | Tandem |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Mtr1g0051 | 25 | 73 | C2H2 Transcription Factor Family | AT3G01460 | 46.939 | 1.88e-10 | 60.5 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TR | PHD | Mtr1g0051 | PHD | 5.8e-11 | CL0390 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Mtr1g0051 | K24406 | - | gmx:100775247 | 528.094 |