Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr1g0049 ATGACAACCATTTTCACAACTTCCCGTTTTCTGCTAAAAACCCTGAAACTCACCTCACATTCAAACGCCGTTAATCTCAGAAGCTTCCGTTTATCAGCAATGAACACTTCAGCTATGGCTTCCAGTAACGGTAACGGCGGCGTAGTTCGCTTTCCATTATCTTCATCCAACGCTTTGATCATTCAGAAAGGTGATATCACCAAATGGTCCATCGATGGTTCCACTGATGCAATTGTAAATCCTGCAAATGAGAGAATGCTTGGAGGTGGTGGTGCAGATGGAGCCATACATAGGGCTGCTGGTCCAGATCTTCTTAGAGCATGCCGGAATGTTCCAGAAGTCAGGCCTGGAGTTCGCTGCCCAACAGGGGAAGCAAGGATCACACCAGGTTTCTTGCTGCCTGCTTCTCATGTTATTCATACTGTTGGCCCAATCTACGATGTTGATAGTAATCCTGCTGCCTCTCTGGCAAGTGCTTACAGGAATAGTTTGAGGGTTGCAAAAGAGAACAACATTCAGTATATAGCATTCCCAGCCATATCATGTGGTGTTTACGGATACCCTTACGATGAAGCTGCTACCGTAGCAATTTCTACCATCAAAGAATTCCAAAATGACTTCAAGGAGGTCCACTTCGTTCTCTTCATGTCTGATATTTATGACACATGGTTAAATAAATCGGATGAATTGCTGAAATATTAG 702 0.4402 MTTIFTTSRFLLKTLKLTSHSNAVNLRSFRLSAMNTSAMASSNGNGGVVRFPLSSSNALIIQKGDITKWSIDGSTDAIVNPANERMLGGGGADGAIHRAAGPDLLRACRNVPEVRPGVRCPTGEARITPGFLLPASHVIHTVGPIYDVDSNPAASLASAYRNSLRVAKENNIQYIAFPAISCGVYGYPYDEAATVAISTIKEFQNDFKEVHFVLFMSDIYDTWLNKSDELLKY* 234
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr1g0049 233 PANTHER MACRO DOMAIN-CONTAINING PROTEIN VPA0103-LIKE ISOFORM X1 29 232 - -
Mtr1g0049 233 PANTHER GANGLIOSIDE INDUCED DIFFERENTIATION ASSOCIATED PROTEIN 2-RELATED 29 232 - -
Mtr1g0049 233 SUPERFAMILY Macro domain-like 58 228 IPR043472 -
Mtr1g0049 233 Gene3D Leucine Aminopeptidase, subunit E, domain 1 16 232 IPR043472 -
Mtr1g0049 233 SMART YBR022w_8 58 196 IPR002589 -
Mtr1g0049 233 CDD Macro_OAADPr_deacetylase 59 226 - -
Mtr1g0049 233 ProSiteProfiles Macro domain profile. 46 231 IPR002589 -
Mtr1g0049 233 Pfam Macro domain 79 196 IPR002589 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr1g0049 64 169 C2H2 Transcription Factor Family AT5G01310 35.294 1.73e-07 49.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr1g0049 K23518 - gmx:100811169 359.377